RNA–Protein interactions for RNA: ENST00000011898.9

TSPAN9-201, Transcript of tetraspanin 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN9, Length 4,323 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9-201ENST00000011898 TFECO14948 347 aaPredicted RBP12.28□□□□□ -0.44
TSPAN9-201ENST00000011898 MAGEB3O15480 346 aa12.28□□□□□ -0.44
TSPAN9-201ENST00000011898 PENKP01210 267 aaPredicted RBP12.28□□□□□ -0.44
TSPAN9-201ENST00000011898 HSMCR30P0CW71 290 aa12.28□□□□□ -0.44
TSPAN9-201ENST00000011898 NUMBP49757 651 aa12.28□□□□□ -0.44
TSPAN9-201ENST00000011898 ABATP80404 500 aa12.28□□□□□ -0.44
TSPAN9-201ENST00000011898 ZC3H3Q8IXZ2 948 aaKnown RBP12.28□□□□□ -0.44
TSPAN9-201ENST00000011898 EBNA1BP2Q99848 306 aaKnown RBP12.28□□□□□ -0.44
TSPAN9-201ENST00000011898 DHX33Q9H6R0 707 aaKnown RBP12.28□□□□□ -0.44
TSPAN9-201ENST00000011898 LGALS13Q9UHV8 139 aa12.28□□□□□ -0.44
TSPAN9-201ENST00000011898 FBP2O00757 339 aa12.27□□□□□ -0.44
TSPAN9-201ENST00000011898 GEMP55040 296 aa12.27□□□□□ -0.44
TSPAN9-201ENST00000011898 CSHL1Q14406 222 aa12.27□□□□□ -0.44
TSPAN9-201ENST00000011898 CELF3Q5SZQ8 465 aaKnown RBP12.27□□□□□ -0.44
TSPAN9-201ENST00000011898 IQSEC1Q6DN90 963 aa12.27□□□□□ -0.44
TSPAN9-201ENST00000011898 VSTM1Q6UX27 236 aa12.27□□□□□ -0.44
TSPAN9-201ENST00000011898 NT5DC4Q86YG4 428 aa12.27□□□□□ -0.44
TSPAN9-201ENST00000011898 FAM136AQ96C01 138 aa12.27□□□□□ -0.44
TSPAN9-201ENST00000011898 B3GALT6Q96L58 329 aa12.27□□□□□ -0.44
TSPAN9-201ENST00000011898 PPP1R2P1Q96PQ5 205 aa12.27□□□□□ -0.44
TSPAN9-201ENST00000011898 SEPHS2Q99611 448 aa12.27□□□□□ -0.44
TSPAN9-201ENST00000011898 TOR3AQ9H497 397 aa12.27□□□□□ -0.44
TSPAN9-201ENST00000011898 AASDHPPTQ9NRN7 309 aa12.27□□□□□ -0.44
TSPAN9-201ENST00000011898 A0A0A0MRY4 1105 aa12.27□□□□□ -0.45
TSPAN9-201ENST00000011898 C2orf71A6NGG8 1288 aa12.27□□□□□ -0.45
TSPAN9-201ENST00000011898 TPP1O14773 563 aa12.27□□□□□ -0.45
TSPAN9-201ENST00000011898 CLASP2O75122 1294 aaKnown RBP12.27□□□□□ -0.45
TSPAN9-201ENST00000011898 KRT6AP02538 564 aa12.27□□□□□ -0.45
TSPAN9-201ENST00000011898 KRT6BP04259 564 aa12.27□□□□□ -0.45
TSPAN9-201ENST00000011898 NR4A1P22736 598 aa12.27□□□□□ -0.45
TSPAN9-201ENST00000011898 SOX6P35712 828 aa12.27□□□□□ -0.45
TSPAN9-201ENST00000011898 TRAF3Q13114 568 aa12.27□□□□□ -0.45
TSPAN9-201ENST00000011898 RNASEH2BQ5TBB1 312 aaKnown RBP12.27□□□□□ -0.45
TSPAN9-201ENST00000011898 GRTP1Q5TC63 336 aa12.27□□□□□ -0.45
TSPAN9-201ENST00000011898 ANKRD22Q5VYY1 191 aa12.27□□□□□ -0.45
TSPAN9-201ENST00000011898 KCNMB4Q86W47 210 aa12.27□□□□□ -0.45
TSPAN9-201ENST00000011898 PARP8Q8N3A8 854 aa12.27□□□□□ -0.45
TSPAN9-201ENST00000011898 PLEKHO2Q8TD55 490 aa12.27□□□□□ -0.45
TSPAN9-201ENST00000011898 ELMO1Q92556 727 aa12.27□□□□□ -0.45
TSPAN9-201ENST00000011898 SPATA13Q96N96 652 aa12.27□□□□□ -0.45
TSPAN9-201ENST00000011898 NDFIP2Q9NV92 336 aa12.27□□□□□ -0.45
TSPAN9-201ENST00000011898 MAGEB16A2A368 324 aa12.27□□□□□ -0.45
TSPAN9-201ENST00000011898 PRR5-ARHGAP8B1AHC4 643 aa12.27□□□□□ -0.45
TSPAN9-201ENST00000011898 SLCO1B7G3V0H7 640 aa12.27□□□□□ -0.45
TSPAN9-201ENST00000011898 DHX15O43143 795 aaKnown RBP12.27□□□□□ -0.45
TSPAN9-201ENST00000011898 NADKO95544 446 aaPredicted RBP12.27□□□□□ -0.45
TSPAN9-201ENST00000011898 PTPN7P35236 360 aa12.27□□□□□ -0.45
TSPAN9-201ENST00000011898 ABCE1P61221 599 aaKnown RBP12.27□□□□□ -0.45
TSPAN9-201ENST00000011898 ARHGAP8P85298 464 aa12.27□□□□□ -0.45
TSPAN9-201ENST00000011898 IL5RAQ01344 420 aa12.27□□□□□ -0.45
TSPAN9-201ENST00000011898 CDH17Q12864 832 aa12.27□□□□□ -0.45
TSPAN9-201ENST00000011898 UBAP2LQ14157 1087 aaKnown RBP12.27□□□□□ -0.45
TSPAN9-201ENST00000011898 RBBP7Q16576 425 aa12.27□□□□□ -0.45
TSPAN9-201ENST00000011898 SPRED3Q2MJR0 410 aa12.27□□□□□ -0.45
TSPAN9-201ENST00000011898 AASDHQ4L235 1098 aaPredicted RBP12.27□□□□□ -0.45
TSPAN9-201ENST00000011898 PPM1LQ5SGD2 360 aa12.27□□□□□ -0.45
TSPAN9-201ENST00000011898 URGCPQ8TCY9 931 aa12.27□□□□□ -0.45
TSPAN9-201ENST00000011898 RSPH1Q8WYR4 309 aa12.27□□□□□ -0.45
TSPAN9-201ENST00000011898 NARS2Q96I59 477 aaKnown RBP12.27□□□□□ -0.45
TSPAN9-201ENST00000011898 APBA2Q99767 749 aa12.27□□□□□ -0.45
TSPAN9-201ENST00000011898 NMRAL1Q9HBL8 299 aa12.27□□□□□ -0.45
TSPAN9-201ENST00000011898 DDX43Q9NXZ2 648 aaKnown RBP12.27□□□□□ -0.45
TSPAN9-201ENST00000011898 TAS2R1Q9NYW7 299 aa12.27□□□□□ -0.45
TSPAN9-201ENST00000011898 DGKBQ9Y6T7 804 aa12.27□□□□□ -0.45
TSPAN9-201ENST00000011898 HEATR9A2RTY3 570 aa12.26□□□□□ -0.45
TSPAN9-201ENST00000011898 A6NHS1 94 aa12.26□□□□□ -0.45
TSPAN9-201ENST00000011898 PSMD12O00232 456 aaPredicted RBP12.26□□□□□ -0.45
TSPAN9-201ENST00000011898 PMM2O15305 246 aa12.26□□□□□ -0.45
TSPAN9-201ENST00000011898 STX7O15400 261 aaKnown RBP12.26□□□□□ -0.45
TSPAN9-201ENST00000011898 VAPBO95292 243 aa12.26□□□□□ -0.45
TSPAN9-201ENST00000011898 HADHAP40939 763 aa12.26□□□□□ -0.45
TSPAN9-201ENST00000011898 ENTPD1P49961 510 aa12.26□□□□□ -0.45
TSPAN9-201ENST00000011898 PHC1P78364 1004 aa12.26□□□□□ -0.45
TSPAN9-201ENST00000011898 XIAPP98170 497 aa12.26□□□□□ -0.45
TSPAN9-201ENST00000011898 GTF2H3Q13889 308 aa12.26□□□□□ -0.45
TSPAN9-201ENST00000011898 FAM110CQ1W6H9 321 aa12.26□□□□□ -0.45
TSPAN9-201ENST00000011898 FUT11Q495W5 492 aa12.26□□□□□ -0.45
TSPAN9-201ENST00000011898 PLEKHH3Q7Z736 793 aa12.26□□□□□ -0.45
TSPAN9-201ENST00000011898 TTC30AQ86WT1 665 aa12.26□□□□□ -0.45
TSPAN9-201ENST00000011898 MYO1HQ8N1T3 1032 aa12.26□□□□□ -0.45
TSPAN9-201ENST00000011898 EFHBQ8N7U6 833 aa12.26□□□□□ -0.45
TSPAN9-201ENST00000011898 TFAP2BQ92481 460 aa12.26□□□□□ -0.45
TSPAN9-201ENST00000011898 HHIPL1Q96JK4 782 aa12.26□□□□□ -0.45
TSPAN9-201ENST00000011898 LGMNQ99538 433 aa12.26□□□□□ -0.45
TSPAN9-201ENST00000011898 LHX5Q9H2C1 402 aa12.26□□□□□ -0.45
TSPAN9-201ENST00000011898 PRDM12Q9H4Q4 367 aa12.26□□□□□ -0.45
TSPAN9-201ENST00000011898 RBM22Q9NW64 420 aaKnown RBP eCLIP12.26□□□□□ -0.45
TSPAN9-201ENST00000011898 LNPEPQ9UIQ6 1025 aa12.26□□□□□ -0.45
TSPAN9-201ENST00000011898 PHF24Q9UPV7 400 aa12.26□□□□□ -0.45
TSPAN9-201ENST00000011898 PHIPQ8WWQ0 1821 aa12.26□□□□□ -0.45
TSPAN9-201ENST00000011898 CCDC182A6NF36 153 aa12.26□□□□□ -0.45
TSPAN9-201ENST00000011898 H2AFYO75367 372 aaKnown RBP12.26□□□□□ -0.45
TSPAN9-201ENST00000011898 RECQL4O94761 1208 aa12.26□□□□□ -0.45
TSPAN9-201ENST00000011898 FBXO21O94952 628 aa12.26□□□□□ -0.45
TSPAN9-201ENST00000011898 LGALS2P05162 132 aa12.26□□□□□ -0.45
TSPAN9-201ENST00000011898 CD48P09326 243 aa12.26□□□□□ -0.45
TSPAN9-201ENST00000011898 PSMB4P28070 264 aa12.26□□□□□ -0.45
TSPAN9-201ENST00000011898 APLP1P51693 650 aa12.26□□□□□ -0.45
TSPAN9-201ENST00000011898 NAGLUP54802 743 aa12.26□□□□□ -0.45
TSPAN9-201ENST00000011898 WDR4P57081 412 aaKnown RBP12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms