RNA–Protein interactions for RNA: ENSMUST00000076265.12

Upf3b-201, Transcript of UPF3 regulator of nonsense transcripts homolog B (yeast), mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Upf3b, Length 2,344 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3b-201ENSMUST00000076265 Pcdhgb8A0A140LI48 931 aa9.2□□□□□ -0.94
Upf3b-201ENSMUST00000076265 IqccA2ADZ8 418 aa9.2□□□□□ -0.94
Upf3b-201ENSMUST00000076265 Slc25a53A2AF28 346 aa9.2□□□□□ -0.94
Upf3b-201ENSMUST00000076265 Phactr2B1AVP0 632 aa9.2□□□□□ -0.94
Upf3b-201ENSMUST00000076265 Ccdc170D3YXL0 722 aa9.2□□□□□ -0.94
Upf3b-201ENSMUST00000076265 Trim5E9PV98 497 aa9.2□□□□□ -0.94
Upf3b-201ENSMUST00000076265 Cyp2j8G3UZ38 503 aa9.2□□□□□ -0.94
Upf3b-201ENSMUST00000076265 Gsg1l2M0QWL6 290 aa9.2□□□□□ -0.94
Upf3b-201ENSMUST00000076265 Akap1O08715 857 aaKnown RBP9.2□□□□□ -0.94
Upf3b-201ENSMUST00000076265 Ifnar2O35664 513 aa9.2□□□□□ -0.94
Upf3b-201ENSMUST00000076265 Nme6O88425 189 aa9.2□□□□□ -0.94
Upf3b-201ENSMUST00000076265 Tlr8P58682 1032 aa9.2□□□□□ -0.94
Upf3b-201ENSMUST00000076265 Rims4P60191 269 aa9.2□□□□□ -0.94
Upf3b-201ENSMUST00000076265 Tubb4bP68372 445 aaKnown RBP9.2□□□□□ -0.94
Upf3b-201ENSMUST00000076265 Dlx4P70436 240 aa9.2□□□□□ -0.94
Upf3b-201ENSMUST00000076265 Rps3aP97351 264 aaKnown RBP9.2□□□□□ -0.94
Upf3b-201ENSMUST00000076265 Scand1Q2M4I6 142 aa9.2□□□□□ -0.94
Upf3b-201ENSMUST00000076265 Taar4Q5QD15 347 aa9.2□□□□□ -0.94
Upf3b-201ENSMUST00000076265 Dhx33Q80VY9 698 aaKnown RBP9.2□□□□□ -0.94
Upf3b-201ENSMUST00000076265 Lrsam1Q80ZI6 727 aa9.2□□□□□ -0.94
Upf3b-201ENSMUST00000076265 Gprc5aQ8BHL4 356 aa9.2□□□□□ -0.94
Upf3b-201ENSMUST00000076265 Rhbdd3Q8BP97 385 aa9.2□□□□□ -0.94
Upf3b-201ENSMUST00000076265 Cog5Q8C0L8 829 aa9.2□□□□□ -0.94
Upf3b-201ENSMUST00000076265 Dennd1cQ8CFK6 786 aa9.2□□□□□ -0.94
Upf3b-201ENSMUST00000076265 Prl7b1Q8CGZ9 251 aa9.2□□□□□ -0.94
Upf3b-201ENSMUST00000076265 Tmem134Q8R0J4 195 aa9.2□□□□□ -0.94
Upf3b-201ENSMUST00000076265 Vmn1r87Q8R255 295 aa9.2□□□□□ -0.94
Upf3b-201ENSMUST00000076265 Olfr827Q8VEV5 322 aa9.2□□□□□ -0.94
Upf3b-201ENSMUST00000076265 Camk1gQ91VB2 477 aa9.2□□□□□ -0.94
Upf3b-201ENSMUST00000076265 Elmod3Q91YP6 381 aa9.2□□□□□ -0.94
Upf3b-201ENSMUST00000076265 Gjc3Q921C1 269 aa9.2□□□□□ -0.94
Upf3b-201ENSMUST00000076265 Zfp810Q99K45 461 aa9.2□□□□□ -0.94
Upf3b-201ENSMUST00000076265 AspnQ99MQ4 373 aa9.2□□□□□ -0.94
Upf3b-201ENSMUST00000076265 Golga1Q9CW79 758 aa9.2□□□□□ -0.94
Upf3b-201ENSMUST00000076265 Alkbh7Q9D6Z0 221 aa9.2□□□□□ -0.94
Upf3b-201ENSMUST00000076265 GatmQ9D964 423 aaKnown RBP9.2□□□□□ -0.94
Upf3b-201ENSMUST00000076265 Cnga3Q9JJZ8 631 aa9.2□□□□□ -0.94
Upf3b-201ENSMUST00000076265 Znf536Q8K083 1302 aa9.2□□□□□ -0.94
Upf3b-201ENSMUST00000076265 Card9A2AIV8 536 aa9.2□□□□□ -0.94
Upf3b-201ENSMUST00000076265 Atp8b5A3FIN4 1183 aa9.2□□□□□ -0.94
Upf3b-201ENSMUST00000076265 Crabp2P22935 138 aa9.2□□□□□ -0.94
Upf3b-201ENSMUST00000076265 Ptpn11P35235 597 aa9.2□□□□□ -0.94
Upf3b-201ENSMUST00000076265 CcnfP51944 777 aa9.2□□□□□ -0.94
Upf3b-201ENSMUST00000076265 Rab1AP62821 205 aa9.2□□□□□ -0.94
Upf3b-201ENSMUST00000076265 Ect2Q07139 913 aa9.2□□□□□ -0.94
Upf3b-201ENSMUST00000076265 Gm1604bQ3TRG0 118 aa9.2□□□□□ -0.94
Upf3b-201ENSMUST00000076265 Q3U4G0 281 aa9.2□□□□□ -0.94
Upf3b-201ENSMUST00000076265 Mex3dQ3UE17 643 aaKnown RBP9.2□□□□□ -0.94
Upf3b-201ENSMUST00000076265 Ccdc177Q3UHB8 706 aa9.2□□□□□ -0.94
Upf3b-201ENSMUST00000076265 Esrp1Q3US41 680 aaKnown RBP9.2□□□□□ -0.94
Upf3b-201ENSMUST00000076265 VwdeQ6DFV8 926 aa9.2□□□□□ -0.94
Upf3b-201ENSMUST00000076265 Capn11Q6J756 714 aa9.2□□□□□ -0.94
Upf3b-201ENSMUST00000076265 IpmkQ7TT16 396 aa9.2□□□□□ -0.94
Upf3b-201ENSMUST00000076265 Best2Q8BGM5 508 aa9.2□□□□□ -0.94
Upf3b-201ENSMUST00000076265 Sema3dQ8BH34 777 aa9.2□□□□□ -0.94
Upf3b-201ENSMUST00000076265 Chmp2bQ8BJF9 213 aa9.2□□□□□ -0.94
Upf3b-201ENSMUST00000076265 Pde10aQ8CA95 790 aa9.2□□□□□ -0.94
Upf3b-201ENSMUST00000076265 Tada2aQ8CHV6 443 aa9.2□□□□□ -0.94
Upf3b-201ENSMUST00000076265 Dusp19Q8K4T5 220 aa9.2□□□□□ -0.94
Upf3b-201ENSMUST00000076265 Klhl25Q8R2P1 589 aa9.2□□□□□ -0.94
Upf3b-201ENSMUST00000076265 Washc1Q8VDD8 475 aa9.2□□□□□ -0.94
Upf3b-201ENSMUST00000076265 TrilQ9DBY4 809 aa9.2□□□□□ -0.94
Upf3b-201ENSMUST00000076265 Vmn1r56Q9EPS9 310 aa9.2□□□□□ -0.94
Upf3b-201ENSMUST00000076265 Ubr3Q5U430 1889 aa9.2□□□□□ -0.94
Upf3b-201ENSMUST00000076265 Olfr316A0A0N4SVP2 306 aa9.19□□□□□ -0.94
Upf3b-201ENSMUST00000076265 Znf385cA2A5E6 429 aa9.19□□□□□ -0.94
Upf3b-201ENSMUST00000076265 Mybpc1D3YU50 1127 aa9.19□□□□□ -0.94
Upf3b-201ENSMUST00000076265 Nmt1O70310 496 aaKnown RBP9.19□□□□□ -0.94
Upf3b-201ENSMUST00000076265 GzmeP08884 248 aa9.19□□□□□ -0.94
Upf3b-201ENSMUST00000076265 Ftl2P49945 183 aa9.19□□□□□ -0.94
Upf3b-201ENSMUST00000076265 Sash1P59808 1230 aa9.19□□□□□ -0.94
Upf3b-201ENSMUST00000076265 Npy2rP97295 381 aa9.19□□□□□ -0.94
Upf3b-201ENSMUST00000076265 Rgs9bpQ148R9 237 aa9.19□□□□□ -0.94
Upf3b-201ENSMUST00000076265 1700066B19RikQ3TS39 127 aa9.19□□□□□ -0.94
Upf3b-201ENSMUST00000076265 Fam92bQ3V2J0 292 aa9.19□□□□□ -0.94
Upf3b-201ENSMUST00000076265 Magee2Q52KG3 523 aa9.19□□□□□ -0.94
Upf3b-201ENSMUST00000076265 Fam169aQ5XG69 665 aa9.19□□□□□ -0.94
Upf3b-201ENSMUST00000076265 Tubb2aQ7TMM9 445 aa9.19□□□□□ -0.94
Upf3b-201ENSMUST00000076265 TdrkhQ80VL1 560 aa9.19□□□□□ -0.94
Upf3b-201ENSMUST00000076265 Ostm1Q8BGT0 338 aa9.19□□□□□ -0.94
Upf3b-201ENSMUST00000076265 Tmem117Q8BH18 514 aa9.19□□□□□ -0.94
Upf3b-201ENSMUST00000076265 Lax1Q8BHB3 407 aa9.19□□□□□ -0.94
Upf3b-201ENSMUST00000076265 Haus1Q8BHX1 278 aa9.19□□□□□ -0.94
Upf3b-201ENSMUST00000076265 Sulf2Q8CFG0 875 aa9.19□□□□□ -0.94
Upf3b-201ENSMUST00000076265 Kremen2Q8K1S7 461 aa9.19□□□□□ -0.94
Upf3b-201ENSMUST00000076265 Hip1Q8VD75 1029 aaKnown RBP9.19□□□□□ -0.94
Upf3b-201ENSMUST00000076265 Klrb1fQ8VD98 217 aa9.19□□□□□ -0.94
Upf3b-201ENSMUST00000076265 Olfr1448Q8VFX1 314 aa9.19□□□□□ -0.94
Upf3b-201ENSMUST00000076265 Nt5c1bQ91YE9 573 aa9.19□□□□□ -0.94
Upf3b-201ENSMUST00000076265 Asb6Q91ZU1 418 aa9.19□□□□□ -0.94
Upf3b-201ENSMUST00000076265 Spef1Q99JL1 234 aa9.19□□□□□ -0.94
Upf3b-201ENSMUST00000076265 XpotQ9CRT8 963 aa9.19□□□□□ -0.94
Upf3b-201ENSMUST00000076265 Tubb2bQ9CWF2 445 aa9.19□□□□□ -0.94
Upf3b-201ENSMUST00000076265 Bcl7aQ9CXE2 210 aa9.19□□□□□ -0.94
Upf3b-201ENSMUST00000076265 Slc25a19Q9DAM5 318 aa9.19□□□□□ -0.94
Upf3b-201ENSMUST00000076265 PrccQ9EQC8 491 aaKnown RBP9.19□□□□□ -0.94
Upf3b-201ENSMUST00000076265 Gmeb1Q9JL60 562 aa9.19□□□□□ -0.94
Upf3b-201ENSMUST00000076265 Cul3Q9JLV5 768 aa9.19□□□□□ -0.94
Upf3b-201ENSMUST00000076265 Ccnt1Q9QWV9 724 aaKnown RBP9.19□□□□□ -0.94
Upf3b-201ENSMUST00000076265 Usp21Q9QZL6 566 aa9.19□□□□□ -0.94
Retrieved 100 of 22,080 RNA–protein pairs in 19.5 ms