RNA–Protein interactions for RNA: ENSMUST00000063588.10

Vamp1-202, Transcript of Vesicle-associated membrane protein 1, mousemouse

TSL 2 BASIC

Gene Vamp1, Length 1,400 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vamp1-202ENSMUST00000063588 Foxred2Q3USW5 665 aa11.47□□□□□ -0.57
Vamp1-202ENSMUST00000063588 Sdf4Q61112 361 aa11.47□□□□□ -0.57
Vamp1-202ENSMUST00000063588 Arnt2Q61324 712 aa11.47□□□□□ -0.57
Vamp1-202ENSMUST00000063588 Tead4Q62296 427 aa11.47□□□□□ -0.57
Vamp1-202ENSMUST00000063588 Exoc3l4Q6DIA2 721 aa11.47□□□□□ -0.57
Vamp1-202ENSMUST00000063588 Q6GQU0 248 aa11.47□□□□□ -0.57
Vamp1-202ENSMUST00000063588 Slc16a9Q7TM99 508 aa11.47□□□□□ -0.57
Vamp1-202ENSMUST00000063588 Fam109aQ8BH49 266 aa11.47□□□□□ -0.57
Vamp1-202ENSMUST00000063588 Tusc3Q8BTV1 347 aa11.47□□□□□ -0.57
Vamp1-202ENSMUST00000063588 Zfp398Q8BV16 643 aa11.47□□□□□ -0.57
Vamp1-202ENSMUST00000063588 Tbc1d17Q8BYH7 645 aa11.47□□□□□ -0.57
Vamp1-202ENSMUST00000063588 Q8C4P0 716 aa11.47□□□□□ -0.57
Vamp1-202ENSMUST00000063588 Erich5Q8K0S2 362 aa11.47□□□□□ -0.57
Vamp1-202ENSMUST00000063588 Vmn1r188Q8K3N2 308 aa11.47□□□□□ -0.57
Vamp1-202ENSMUST00000063588 Nudcd3Q8R1N4 363 aa11.47□□□□□ -0.57
Vamp1-202ENSMUST00000063588 Gfm2Q8R2Q4 779 aa11.47□□□□□ -0.57
Vamp1-202ENSMUST00000063588 Slf1Q8R3P9 1054 aa11.47□□□□□ -0.57
Vamp1-202ENSMUST00000063588 Nup85Q8R480 656 aaKnown RBP11.47□□□□□ -0.57
Vamp1-202ENSMUST00000063588 Pglyrp2Q8VCS0 530 aa11.47□□□□□ -0.57
Vamp1-202ENSMUST00000063588 Mark1Q8VHJ5 795 aa11.47□□□□□ -0.57
Vamp1-202ENSMUST00000063588 Cwh43Q91YL7 699 aa11.47□□□□□ -0.57
Vamp1-202ENSMUST00000063588 Tfap2dQ91ZK0 452 aa11.47□□□□□ -0.57
Vamp1-202ENSMUST00000063588 Mrfap1Q9CQL7 125 aa11.47□□□□□ -0.57
Vamp1-202ENSMUST00000063588 Setd6Q9CWY3 473 aa11.47□□□□□ -0.57
Vamp1-202ENSMUST00000063588 Anks3Q9CZK6 655 aa11.47□□□□□ -0.57
Vamp1-202ENSMUST00000063588 Tmem80Q9D3H0 123 aa11.47□□□□□ -0.57
Vamp1-202ENSMUST00000063588 Rsc1a1Q9ER99 582 aa11.47□□□□□ -0.57
Vamp1-202ENSMUST00000063588 Ropn1Q9ESG2 212 aa11.47□□□□□ -0.57
Vamp1-202ENSMUST00000063588 Pi16Q9ET66 489 aa11.47□□□□□ -0.57
Vamp1-202ENSMUST00000063588 CasrQ9QY96 1079 aa11.47□□□□□ -0.57
Vamp1-202ENSMUST00000063588 Ap4b1Q9WV76 738 aa11.47□□□□□ -0.57
Vamp1-202ENSMUST00000063588 TriobpQ99KW3 2014 aa11.47□□□□□ -0.57
Vamp1-202ENSMUST00000063588 Nup205A0A0J9YUD5 2061 aaKnown RBP11.47□□□□□ -0.57
Vamp1-202ENSMUST00000063588 Dhx35A2ACQ1 703 aaKnown RBP11.46□□□□□ -0.57
Vamp1-202ENSMUST00000063588 Gm4450E9Q007 373 aa11.46□□□□□ -0.57
Vamp1-202ENSMUST00000063588 Olfr414E9Q5P8 317 aa11.46□□□□□ -0.57
Vamp1-202ENSMUST00000063588 Gm5689F6Y2A6 97 aa11.46□□□□□ -0.57
Vamp1-202ENSMUST00000063588 KlO35082 1014 aa11.46□□□□□ -0.57
Vamp1-202ENSMUST00000063588 Serpini1O35684 410 aa11.46□□□□□ -0.57
Vamp1-202ENSMUST00000063588 AvilO88398 819 aa11.46□□□□□ -0.57
Vamp1-202ENSMUST00000063588 LdhcP00342 332 aa11.46□□□□□ -0.57
Vamp1-202ENSMUST00000063588 P01668 110 aa11.46□□□□□ -0.57
Vamp1-202ENSMUST00000063588 P04214 136 aa11.46□□□□□ -0.57
Vamp1-202ENSMUST00000063588 Got2P05202 430 aaKnown RBP11.46□□□□□ -0.57
Vamp1-202ENSMUST00000063588 PdgfrbP05622 1098 aa11.46□□□□□ -0.57
Vamp1-202ENSMUST00000063588 MaptP10637 733 aa11.46□□□□□ -0.57
Vamp1-202ENSMUST00000063588 Rpl36P47964 105 aaKnown RBP11.46□□□□□ -0.57
Vamp1-202ENSMUST00000063588 CenpcP49452 906 aaKnown RBP11.46□□□□□ -0.57
Vamp1-202ENSMUST00000063588 Btbd1P58544 488 aa11.46□□□□□ -0.57
Vamp1-202ENSMUST00000063588 Neurog1P70660 244 aa11.46□□□□□ -0.57
Vamp1-202ENSMUST00000063588 Psmb4P99026 264 aa11.46□□□□□ -0.57
Vamp1-202ENSMUST00000063588 Uba1Q02053 1058 aaKnown RBP11.46□□□□□ -0.57
Vamp1-202ENSMUST00000063588 Rcn1Q05186 325 aa11.46□□□□□ -0.57
Vamp1-202ENSMUST00000063588 Ccdc138Q0VF22 680 aa11.46□□□□□ -0.57
Vamp1-202ENSMUST00000063588 IqcmQ149I8 489 aa11.46□□□□□ -0.57
Vamp1-202ENSMUST00000063588 Drc1Q3USS3 753 aa11.46□□□□□ -0.57
Vamp1-202ENSMUST00000063588 Abl2Q4JIM5 1182 aa11.46□□□□□ -0.57
Vamp1-202ENSMUST00000063588 Prss36Q5K2P8 849 aa11.46□□□□□ -0.57
Vamp1-202ENSMUST00000063588 Luc7l3Q5SUF2 432 aaKnown RBP11.46□□□□□ -0.57
Vamp1-202ENSMUST00000063588 Hsd3b4Q61767 373 aa11.46□□□□□ -0.57
Vamp1-202ENSMUST00000063588 Hbs1lQ69ZS7 682 aa11.46□□□□□ -0.57
Vamp1-202ENSMUST00000063588 Scaf4Q6PFF0 1209 aaKnown RBP11.46□□□□□ -0.57
Vamp1-202ENSMUST00000063588 Sort1Q6PHU5 825 aa11.46□□□□□ -0.57
Vamp1-202ENSMUST00000063588 Paqr6Q6TCG5 343 aa11.46□□□□□ -0.57
Vamp1-202ENSMUST00000063588 Olfr698Q7TRN4 311 aa11.46□□□□□ -0.57
Vamp1-202ENSMUST00000063588 Rps6kc1Q8BLK9 1056 aa11.46□□□□□ -0.57
Vamp1-202ENSMUST00000063588 Tmco6Q8BQX5 494 aa11.46□□□□□ -0.57
Vamp1-202ENSMUST00000063588 Psapl1Q8C1C1 522 aa11.46□□□□□ -0.57
Vamp1-202ENSMUST00000063588 Rab44Q8CB87 725 aa11.46□□□□□ -0.57
Vamp1-202ENSMUST00000063588 Wnt9aQ8R5M2 365 aa11.46□□□□□ -0.57
Vamp1-202ENSMUST00000063588 Cadm1Q8R5M8 456 aaKnown RBP11.46□□□□□ -0.57
Vamp1-202ENSMUST00000063588 Oas1dQ8VI95 361 aa11.46□□□□□ -0.57
Vamp1-202ENSMUST00000063588 Smim14Q91VT8 99 aa11.46□□□□□ -0.57
Vamp1-202ENSMUST00000063588 NtpcrQ9CQA9 190 aaKnown RBP11.46□□□□□ -0.57
Vamp1-202ENSMUST00000063588 Spg21Q9CQC8 308 aa11.46□□□□□ -0.57
Vamp1-202ENSMUST00000063588 Ilf2Q9CXY6 390 aaKnown RBP11.46□□□□□ -0.57
Vamp1-202ENSMUST00000063588 Armc9Q9D2I5 817 aa11.46□□□□□ -0.57
Vamp1-202ENSMUST00000063588 Ppil6Q9D6D8 278 aa11.46□□□□□ -0.57
Vamp1-202ENSMUST00000063588 Tlr9Q9EQU3 1032 aa11.46□□□□□ -0.57
Vamp1-202ENSMUST00000063588 RhojQ9ER71 214 aa11.46□□□□□ -0.57
Vamp1-202ENSMUST00000063588 Sept6Q9R1T4 434 aa11.46□□□□□ -0.57
Vamp1-202ENSMUST00000063588 Tle2Q9WVB2 767 aa11.46□□□□□ -0.57
Vamp1-202ENSMUST00000063588 1110002E22RikE0CYV9 1786 aa11.46□□□□□ -0.57
Vamp1-202ENSMUST00000063588 MylkQ6PDN3 1941 aaKnown RBP11.46□□□□□ -0.58
Vamp1-202ENSMUST00000063588 BC025446A0A087WQT1 134 aa11.45□□□□□ -0.58
Vamp1-202ENSMUST00000063588 Mkrn2osD3Z393 217 aa11.45□□□□□ -0.58
Vamp1-202ENSMUST00000063588 Adamts14E9PX39 1209 aa11.45□□□□□ -0.58
Vamp1-202ENSMUST00000063588 Dthd1E9PZX1 795 aa11.45□□□□□ -0.58
Vamp1-202ENSMUST00000063588 Speer4f2E9Q366 295 aa11.45□□□□□ -0.58
Vamp1-202ENSMUST00000063588 Tekt5G5E8A8 557 aa11.45□□□□□ -0.58
Vamp1-202ENSMUST00000063588 Slc1a6O35544 561 aa11.45□□□□□ -0.58
Vamp1-202ENSMUST00000063588 Spp1P10923 294 aaKnown RBP11.45□□□□□ -0.58
Vamp1-202ENSMUST00000063588 Gnat1P20612 350 aa11.45□□□□□ -0.58
Vamp1-202ENSMUST00000063588 Gdf5P43027 495 aa11.45□□□□□ -0.58
Vamp1-202ENSMUST00000063588 Csrp3P50462 194 aa11.45□□□□□ -0.58
Vamp1-202ENSMUST00000063588 Ephb2P54763 986 aa11.45□□□□□ -0.58
Vamp1-202ENSMUST00000063588 Atp5bP56480 529 aaKnown RBP11.45□□□□□ -0.58
Vamp1-202ENSMUST00000063588 SnnP61807 88 aa11.45□□□□□ -0.58
Vamp1-202ENSMUST00000063588 Serpinb5P70124 375 aaKnown RBP11.45□□□□□ -0.58
Vamp1-202ENSMUST00000063588 Serping1P97290 504 aa11.45□□□□□ -0.58
Retrieved 100 of 22,080 RNA–protein pairs in 27.5 ms