RNA–Protein interactions for RNA: ENSMUST00000034060.6

Sh3rf1-201, Transcript of E3 ubiquitin-protein ligase SH3RF1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sh3rf1, Length 5,479 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf1-201ENSMUST00000034060 UprtB1AVZ0 310 aa23.37■■□□□ 1.33
Sh3rf1-201ENSMUST00000034060 Srp54P14576 504 aa23.37■■□□□ 1.33
Sh3rf1-201ENSMUST00000034060 Pnma2Q8BHK0 365 aa23.37■■□□□ 1.33
Sh3rf1-201ENSMUST00000034060 Zbtb33Q8BN78 671 aa23.37■■□□□ 1.33
Sh3rf1-201ENSMUST00000034060 Robo4Q8C310 1012 aa23.37■■□□□ 1.33
Sh3rf1-201ENSMUST00000034060 Ubqln1Q8R317 582 aa23.37■■□□□ 1.33
Sh3rf1-201ENSMUST00000034060 HnrnpabQ99020 285 aaKnown RBP23.37■■□□□ 1.33
Sh3rf1-201ENSMUST00000034060 AasdhpptQ9CQF6 309 aa23.37■■□□□ 1.33
Sh3rf1-201ENSMUST00000034060 LipaQ9Z0M5 397 aa23.37■■□□□ 1.33
Sh3rf1-201ENSMUST00000034060 MntO08789 591 aa23.37■■□□□ 1.33
Sh3rf1-201ENSMUST00000034060 Cyp2c66Q5GLZ0 490 aa23.37■■□□□ 1.33
Sh3rf1-201ENSMUST00000034060 Fndc5Q8K4Z2 209 aa23.37■■□□□ 1.33
Sh3rf1-201ENSMUST00000034060 Myl9Q9CQ19 172 aa23.37■■□□□ 1.33
Sh3rf1-201ENSMUST00000034060 Tmem39aQ9CYC3 486 aa23.37■■□□□ 1.33
Sh3rf1-201ENSMUST00000034060 Sertad2Q9JJG5 309 aa23.37■■□□□ 1.33
Sh3rf1-201ENSMUST00000034060 Stap1Q9JM90 297 aaKnown RBP23.37■■□□□ 1.33
Sh3rf1-201ENSMUST00000034060 Ppp3cbP48453 525 aa23.37■■□□□ 1.33
Sh3rf1-201ENSMUST00000034060 Traf6P70196 530 aa23.37■■□□□ 1.33
Sh3rf1-201ENSMUST00000034060 Teddm2Q208S0 260 aa23.37■■□□□ 1.33
Sh3rf1-201ENSMUST00000034060 Rpp40Q8R1F9 363 aa23.37■■□□□ 1.33
Sh3rf1-201ENSMUST00000034060 Akr1c21Q91WR5 323 aa23.37■■□□□ 1.33
Sh3rf1-201ENSMUST00000034060 Magel2Q9QZ04 1284 aa23.37■■□□□ 1.33
Sh3rf1-201ENSMUST00000034060 Shank2Q80Z38 1476 aa23.37■■□□□ 1.33
Sh3rf1-201ENSMUST00000034060 Magea6O89010 325 aa23.37■■□□□ 1.33
Sh3rf1-201ENSMUST00000034060 PrkchP23298 683 aa23.37■■□□□ 1.33
Sh3rf1-201ENSMUST00000034060 Ugt1a2P70691 533 aa23.37■■□□□ 1.33
Sh3rf1-201ENSMUST00000034060 Ipcef1Q5DU31 406 aa23.37■■□□□ 1.33
Sh3rf1-201ENSMUST00000034060 Ugt1a1Q63886 535 aa23.37■■□□□ 1.33
Sh3rf1-201ENSMUST00000034060 Map3k21Q8VDG6 1002 aa23.37■■□□□ 1.33
Sh3rf1-201ENSMUST00000034060 Elp3Q9CZX0 547 aa23.37■■□□□ 1.33
Sh3rf1-201ENSMUST00000034060 Gm13078A2AGW8 474 aa23.36■■□□□ 1.33
Sh3rf1-201ENSMUST00000034060 Gm14401A2ARV7 303 aa23.36■■□□□ 1.33
Sh3rf1-201ENSMUST00000034060 RadxQ8C779 850 aa23.36■■□□□ 1.33
Sh3rf1-201ENSMUST00000034060 Olfr589Q8VGV8 317 aa23.36■■□□□ 1.33
Sh3rf1-201ENSMUST00000034060 Arhgef25Q9CWR0 618 aa23.36■■□□□ 1.33
Sh3rf1-201ENSMUST00000034060 Tcp10cE9Q046 482 aa23.36■■□□□ 1.33
Sh3rf1-201ENSMUST00000034060 Ikzf3O08900 507 aa23.36■■□□□ 1.33
Sh3rf1-201ENSMUST00000034060 Trappc9Q3U0M1 1148 aa23.36■■□□□ 1.33
Sh3rf1-201ENSMUST00000034060 Brinp3Q499E0 766 aa23.36■■□□□ 1.33
Sh3rf1-201ENSMUST00000034060 Ssxb3Q6XAS4 170 aa23.36■■□□□ 1.33
Sh3rf1-201ENSMUST00000034060 4930550L24RikQ99PA7 320 aa23.36■■□□□ 1.33
Sh3rf1-201ENSMUST00000034060 Efcab9Q9DAM2 216 aa23.36■■□□□ 1.33
Sh3rf1-201ENSMUST00000034060 FesP16879 822 aa23.36■■□□□ 1.33
Sh3rf1-201ENSMUST00000034060 Glud1P26443 558 aaKnown RBP23.36■■□□□ 1.33
Sh3rf1-201ENSMUST00000034060 Adora2bQ60614 332 aa23.36■■□□□ 1.33
Sh3rf1-201ENSMUST00000034060 Abcd2Q61285 741 aa23.36■■□□□ 1.33
Sh3rf1-201ENSMUST00000034060 Pcdh20Q8BIZ0 952 aa23.36■■□□□ 1.33
Sh3rf1-201ENSMUST00000034060 Baiap2Q8BKX1 535 aa23.36■■□□□ 1.33
Sh3rf1-201ENSMUST00000034060 Pcdhgb2Q91XX7 928 aa23.36■■□□□ 1.33
Sh3rf1-201ENSMUST00000034060 Kcnt2D3Z649 1135 aa23.36■■□□□ 1.33
Sh3rf1-201ENSMUST00000034060 Rc3h2P0C090 1187 aaKnown RBP23.36■■□□□ 1.33
Sh3rf1-201ENSMUST00000034060 Nxpe4Q52KP5 543 aa23.36■■□□□ 1.33
Sh3rf1-201ENSMUST00000034060 Gpr65Q61038 337 aa23.36■■□□□ 1.33
Sh3rf1-201ENSMUST00000034060 Trub1Q8C0D0 338 aaKnown RBP23.36■■□□□ 1.33
Sh3rf1-201ENSMUST00000034060 Pih1d2Q8CHR9 315 aa23.36■■□□□ 1.33
Sh3rf1-201ENSMUST00000034060 Nudt5Q9JKX6 218 aa23.36■■□□□ 1.33
Sh3rf1-201ENSMUST00000034060 Dip2bQ3UH60 1574 aa23.36■■□□□ 1.33
Sh3rf1-201ENSMUST00000034060 Ssx9Q6XAS3 170 aa23.36■■□□□ 1.33
Sh3rf1-201ENSMUST00000034060 PigxQ99LV7 254 aa23.36■■□□□ 1.33
Sh3rf1-201ENSMUST00000034060 Lrrc4Q99PH1 652 aa23.36■■□□□ 1.33
Sh3rf1-201ENSMUST00000034060 Spesp1Q9D5A0 399 aa23.36■■□□□ 1.33
Sh3rf1-201ENSMUST00000034060 Cep170bQ80U49 1574 aa23.35■■□□□ 1.33
Sh3rf1-201ENSMUST00000034060 Nos2P29477 1144 aa23.35■■□□□ 1.33
Sh3rf1-201ENSMUST00000034060 Stx4P70452 298 aa23.35■■□□□ 1.33
Sh3rf1-201ENSMUST00000034060 Oog3Q3UWY1 500 aa23.35■■□□□ 1.33
Sh3rf1-201ENSMUST00000034060 Klhl23Q6GQU2 558 aa23.35■■□□□ 1.33
Sh3rf1-201ENSMUST00000034060 Mon1aQ6PDG8 556 aa23.35■■□□□ 1.33
Sh3rf1-201ENSMUST00000034060 Ybx3Q9JKB3 361 aaKnown RBP23.35■■□□□ 1.33
Sh3rf1-201ENSMUST00000034060 Gm45208A0A140LJ36 292 aa23.35■■□□□ 1.33
Sh3rf1-201ENSMUST00000034060 Gtf2bP62915 316 aa23.35■■□□□ 1.33
Sh3rf1-201ENSMUST00000034060 Ppp3caP63328 521 aa23.35■■□□□ 1.33
Sh3rf1-201ENSMUST00000034060 Zbtb14Q08376 449 aa23.35■■□□□ 1.33
Sh3rf1-201ENSMUST00000034060 Cdc14bQ6PFY9 485 aa23.35■■□□□ 1.33
Sh3rf1-201ENSMUST00000034060 Phf24Q80TL4 400 aa23.35■■□□□ 1.33
Sh3rf1-201ENSMUST00000034060 BspryQ80YW5 473 aa23.35■■□□□ 1.33
Sh3rf1-201ENSMUST00000034060 Tbc1d14Q8CGA2 694 aa23.35■■□□□ 1.33
Sh3rf1-201ENSMUST00000034060 Mark4Q8CIP4 752 aa23.35■■□□□ 1.33
Sh3rf1-201ENSMUST00000034060 Vav3Q9R0C8 847 aa23.35■■□□□ 1.33
Sh3rf1-201ENSMUST00000034060 Gm7086A0A1W2P766 342 aa23.35■■□□□ 1.33
Sh3rf1-201ENSMUST00000034060 Csf1rP09581 977 aa23.35■■□□□ 1.33
Sh3rf1-201ENSMUST00000034060 Ube2e3P52483 207 aa23.35■■□□□ 1.33
Sh3rf1-201ENSMUST00000034060 Bace1P56818 501 aa23.35■■□□□ 1.33
Sh3rf1-201ENSMUST00000034060 Senp5Q6NXL6 749 aa23.35■■□□□ 1.33
Sh3rf1-201ENSMUST00000034060 Psd2Q6P1I6 770 aa23.35■■□□□ 1.33
Sh3rf1-201ENSMUST00000034060 BC061212Q6P8K3 481 aa23.35■■□□□ 1.33
Sh3rf1-201ENSMUST00000034060 Tmem39bQ810L4 492 aa23.35■■□□□ 1.33
Sh3rf1-201ENSMUST00000034060 Dmtf1Q8CE22 761 aa23.35■■□□□ 1.33
Sh3rf1-201ENSMUST00000034060 Gm8180E9PXN0 145 aa23.35■■□□□ 1.33
Sh3rf1-201ENSMUST00000034060 Spata31d1dE9Q5W2 1247 aa23.35■■□□□ 1.33
Sh3rf1-201ENSMUST00000034060 Vmn2r55G3UWZ4 781 aa23.35■■□□□ 1.33
Sh3rf1-201ENSMUST00000034060 Cyp2c68K7N6C2 491 aa23.35■■□□□ 1.33
Sh3rf1-201ENSMUST00000034060 Vmn2r53L7N473 806 aa23.35■■□□□ 1.33
Sh3rf1-201ENSMUST00000034060 MaffO54791 156 aa23.35■■□□□ 1.33
Sh3rf1-201ENSMUST00000034060 Gas2P11862 314 aaKnown RBP23.35■■□□□ 1.33
Sh3rf1-201ENSMUST00000034060 NfixP70257 488 aa23.35■■□□□ 1.33
Sh3rf1-201ENSMUST00000034060 Dnajc1Q61712 552 aaKnown RBP23.35■■□□□ 1.33
Sh3rf1-201ENSMUST00000034060 Oscp1Q8BHW2 379 aa23.35■■□□□ 1.33
Sh3rf1-201ENSMUST00000034060 Slc39a13Q8BZH0 361 aa23.35■■□□□ 1.33
Sh3rf1-201ENSMUST00000034060 Tmsb15lQ8C0W0 80 aa23.35■■□□□ 1.33
Sh3rf1-201ENSMUST00000034060 Cpxm2Q9D2L5 764 aa23.35■■□□□ 1.33
Retrieved 100 of 22,080 RNA–protein pairs in 20.6 ms