RNA–Protein interactions for RNA: ENST00000639916.1

PAX6-259, Transcript of paired box 6, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PAX6, Length 2,622 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-259ENST00000639916 CCDC33Q8N5R6 958 aa9.17□□□□□ -0.94
PAX6-259ENST00000639916 DTX3Q8N9I9 347 aa9.17□□□□□ -0.94
PAX6-259ENST00000639916 OR6J1Q8NGC5 347 aa9.17□□□□□ -0.94
PAX6-259ENST00000639916 NPLOC4Q8TAT6 608 aa9.17□□□□□ -0.94
PAX6-259ENST00000639916 VPS35Q96QK1 796 aa9.17□□□□□ -0.94
PAX6-259ENST00000639916 CIB1Q99828 191 aa9.17□□□□□ -0.94
PAX6-259ENST00000639916 PDZD7Q9H5P4 517 aa9.17□□□□□ -0.94
PAX6-259ENST00000639916 RRAGCQ9HB90 399 aa9.17□□□□□ -0.94
PAX6-259ENST00000639916 SCUBE2Q9NQ36 999 aa9.17□□□□□ -0.94
PAX6-259ENST00000639916 PNPLA3Q9NST1 481 aa9.17□□□□□ -0.94
PAX6-259ENST00000639916 PARVAQ9NVD7 372 aa9.17□□□□□ -0.94
PAX6-259ENST00000639916 KCNN3Q9UGI6 736 aa9.17□□□□□ -0.94
PAX6-259ENST00000639916 SLC24A2Q9UI40 661 aa9.17□□□□□ -0.94
PAX6-259ENST00000639916 SIX4Q9UIU6 781 aa9.17□□□□□ -0.94
PAX6-259ENST00000639916 COL1A2P08123 1366 aa9.17□□□□□ -0.94
PAX6-259ENST00000639916 ARHGEF37A1IGU5 675 aa9.17□□□□□ -0.94
PAX6-259ENST00000639916 C7orf72A4D263 438 aa9.17□□□□□ -0.94
PAX6-259ENST00000639916 M0QX08 132 aa9.17□□□□□ -0.94
PAX6-259ENST00000639916 NUAK1O60285 661 aa9.17□□□□□ -0.94
PAX6-259ENST00000639916 KCNJ13O60928 360 aa9.17□□□□□ -0.94
PAX6-259ENST00000639916 MMP3P08254 477 aa9.17□□□□□ -0.94
PAX6-259ENST00000639916 M6PRP20645 277 aa9.17□□□□□ -0.94
PAX6-259ENST00000639916 TGM1P22735 817 aa9.17□□□□□ -0.94
PAX6-259ENST00000639916 MLLT10P55197 1068 aa9.17□□□□□ -0.94
PAX6-259ENST00000639916 TRAF2Q12933 501 aa9.17□□□□□ -0.94
PAX6-259ENST00000639916 DNASE1L3Q13609 305 aa9.17□□□□□ -0.94
PAX6-259ENST00000639916 ZNF667Q5HYK9 610 aa9.17□□□□□ -0.94
PAX6-259ENST00000639916 MARCH8Q5T0T0 291 aa9.17□□□□□ -0.94
PAX6-259ENST00000639916 TUBA3EQ6PEY2 450 aa9.17□□□□□ -0.94
PAX6-259ENST00000639916 C1orf127Q8N9H9 656 aa9.17□□□□□ -0.94
PAX6-259ENST00000639916 MINDY2Q8NBR6 621 aa9.17□□□□□ -0.94
PAX6-259ENST00000639916 KBTBD7Q8WVZ9 684 aa9.17□□□□□ -0.94
PAX6-259ENST00000639916 TFAP2BQ92481 460 aa9.17□□□□□ -0.94
PAX6-259ENST00000639916 PGBD4Q96DM1 585 aa9.17□□□□□ -0.94
PAX6-259ENST00000639916 FAM111AQ96PZ2 611 aa9.17□□□□□ -0.94
PAX6-259ENST00000639916 CLSTN3Q9BQT9 956 aa9.17□□□□□ -0.94
PAX6-259ENST00000639916 RUBCNLQ9H714 662 aa9.17□□□□□ -0.94
PAX6-259ENST00000639916 NDFIP2Q9NV92 336 aa9.17□□□□□ -0.94
PAX6-259ENST00000639916 TXNDC16Q9P2K2 825 aa9.17□□□□□ -0.94
PAX6-259ENST00000639916 MARCOQ9UEW3 520 aaPredicted RBP9.17□□□□□ -0.94
PAX6-259ENST00000639916 STRIP2Q9ULQ0 834 aa9.17□□□□□ -0.94
PAX6-259ENST00000639916 USTQ9Y2C2 406 aa9.17□□□□□ -0.94
PAX6-259ENST00000639916 AP4S1Q9Y587 144 aa9.17□□□□□ -0.94
PAX6-259ENST00000639916 CROCCQ5TZA2 2017 aa9.16□□□□□ -0.94
PAX6-259ENST00000639916 FAM172BPA6NC97 362 aa9.16□□□□□ -0.94
PAX6-259ENST00000639916 FSCN2O14926 492 aa9.16□□□□□ -0.94
PAX6-259ENST00000639916 PIAS1O75925 651 aa9.16□□□□□ -0.94
PAX6-259ENST00000639916 LSM8O95777 96 aaKnown RBP9.16□□□□□ -0.94
PAX6-259ENST00000639916 KRT6AP02538 564 aa9.16□□□□□ -0.94
PAX6-259ENST00000639916 KRT6BP04259 564 aa9.16□□□□□ -0.94
PAX6-259ENST00000639916 CAPNS1P04632 268 aa9.16□□□□□ -0.94
PAX6-259ENST00000639916 ITGB3P05106 788 aa9.16□□□□□ -0.94
PAX6-259ENST00000639916 KITP10721 976 aa9.16□□□□□ -0.94
PAX6-259ENST00000639916 KRT10P13645 584 aa9.16□□□□□ -0.94
PAX6-259ENST00000639916 EPHA3P29320 983 aa9.16□□□□□ -0.94
PAX6-259ENST00000639916 RAP1GAPP47736 663 aa9.16□□□□□ -0.94
PAX6-259ENST00000639916 CDH8P55286 799 aa9.16□□□□□ -0.94
PAX6-259ENST00000639916 RPL7AP62424 266 aaKnown RBP9.16□□□□□ -0.94
PAX6-259ENST00000639916 MRPS22P82650 360 aaKnown RBP9.16□□□□□ -0.94
PAX6-259ENST00000639916 NFATC3Q12968 1075 aa9.16□□□□□ -0.94
PAX6-259ENST00000639916 NRF1Q16656 503 aa9.16□□□□□ -0.94
PAX6-259ENST00000639916 IQSEC1Q6DN90 963 aa9.16□□□□□ -0.94
PAX6-259ENST00000639916 KRT80Q6KB66 452 aa9.16□□□□□ -0.94
PAX6-259ENST00000639916 ZC3H7AQ8IWR0 971 aaKnown RBP9.16□□□□□ -0.94
PAX6-259ENST00000639916 KIAA0319LQ8IZA0 1049 aa9.16□□□□□ -0.94
PAX6-259ENST00000639916 TMEM35BQ8NCS4 154 aa9.16□□□□□ -0.94
PAX6-259ENST00000639916 FEZF2Q8TBJ5 459 aa9.16□□□□□ -0.94
PAX6-259ENST00000639916 MZB1Q8WU39 189 aa9.16□□□□□ -0.94
PAX6-259ENST00000639916 RILPQ96NA2 401 aa9.16□□□□□ -0.94
PAX6-259ENST00000639916 EBF4Q9BQW3 602 aa9.16□□□□□ -0.94
PAX6-259ENST00000639916 AIFM2Q9BRQ8 373 aa9.16□□□□□ -0.94
PAX6-259ENST00000639916 C1orf50Q9BV19 199 aa9.16□□□□□ -0.94
PAX6-259ENST00000639916 CLPBQ9H078 707 aa9.16□□□□□ -0.94
PAX6-259ENST00000639916 SETD4Q9NVD3 440 aa9.16□□□□□ -0.94
PAX6-259ENST00000639916 CPA4Q9UI42 421 aa9.16□□□□□ -0.94
PAX6-259ENST00000639916 SLC8A2Q9UPR5 921 aa9.16□□□□□ -0.94
PAX6-259ENST00000639916 GINS2Q9Y248 185 aa9.16□□□□□ -0.94
PAX6-259ENST00000639916 KAT6AQ92794 2004 aa9.16□□□□□ -0.94
PAX6-259ENST00000639916 LINC00854A0A1B0GVQ3 168 aa9.16□□□□□ -0.94
PAX6-259ENST00000639916 SNTNA6NMZ2 147 aa9.16□□□□□ -0.94
PAX6-259ENST00000639916 B8ZZF3 427 aa9.16□□□□□ -0.94
PAX6-259ENST00000639916 SLC22A1O15245 554 aa9.16□□□□□ -0.94
PAX6-259ENST00000639916 SEC24DO94855 1032 aaPredicted RBP9.16□□□□□ -0.94
PAX6-259ENST00000639916 CALB1P05937 261 aa9.16□□□□□ -0.94
PAX6-259ENST00000639916 CD19P15391 556 aa9.16□□□□□ -0.94
PAX6-259ENST00000639916 ZNF26P17031 533 aaPredicted RBP9.16□□□□□ -0.94
PAX6-259ENST00000639916 POLR2CP19387 275 aaPredicted RBP9.16□□□□□ -0.94
PAX6-259ENST00000639916 ITGAXP20702 1163 aa9.16□□□□□ -0.94
PAX6-259ENST00000639916 RFC1P35251 1148 aaPredicted RBP9.16□□□□□ -0.94
PAX6-259ENST00000639916 YWHAEP62258 255 aaKnown RBP9.16□□□□□ -0.94
PAX6-259ENST00000639916 BASP1P80723 227 aaKnown RBP9.16□□□□□ -0.94
PAX6-259ENST00000639916 NME3Q13232 169 aa9.16□□□□□ -0.94
PAX6-259ENST00000639916 STK11Q15831 433 aa9.16□□□□□ -0.94
PAX6-259ENST00000639916 SLC10A6Q3KNW5 377 aa9.16□□□□□ -0.94
PAX6-259ENST00000639916 LRIT3Q3SXY7 679 aa9.16□□□□□ -0.94
PAX6-259ENST00000639916 PRAMEF19Q5SWL8 479 aa9.16□□□□□ -0.94
PAX6-259ENST00000639916 FAM182AQ5T1J6 154 aa9.16□□□□□ -0.94
PAX6-259ENST00000639916 AKAP14Q86UN6 197 aa9.16□□□□□ -0.94
PAX6-259ENST00000639916 WDTC1Q8N5D0 677 aa9.16□□□□□ -0.94
PAX6-259ENST00000639916 TRIB2Q92519 343 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms