RNA–Protein interactions for RNA: ENST00000638725.1

SNIP1-204, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 2

Gene SNIP1, Length 2,761 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-204ENST00000638725 USP2O75604 605 aaPredicted RBP11.07□□□□□ -0.64
SNIP1-204ENST00000638725 TRMUO75648 421 aaKnown RBP11.07□□□□□ -0.64
SNIP1-204ENST00000638725 BEST1O76090 585 aa11.07□□□□□ -0.64
SNIP1-204ENST00000638725 HDCP19113 662 aa11.07□□□□□ -0.64
SNIP1-204ENST00000638725 NOS2P35228 1153 aa11.07□□□□□ -0.64
SNIP1-204ENST00000638725 RABGGTBP53611 331 aa11.07□□□□□ -0.64
SNIP1-204ENST00000638725 PSME3P61289 254 aa11.07□□□□□ -0.64
SNIP1-204ENST00000638725 RALGDSQ12967 914 aa11.07□□□□□ -0.64
SNIP1-204ENST00000638725 TTLL4Q14679 1199 aa11.07□□□□□ -0.64
SNIP1-204ENST00000638725 ZBTB6Q15916 424 aa11.07□□□□□ -0.64
SNIP1-204ENST00000638725 TSTD2Q5T7W7 516 aa11.07□□□□□ -0.64
SNIP1-204ENST00000638725 BORAQ6PGQ7 559 aa11.07□□□□□ -0.64
SNIP1-204ENST00000638725 NUP93Q8N1F7 819 aa11.07□□□□□ -0.64
SNIP1-204ENST00000638725 TSPAN14Q8NG11 270 aa11.07□□□□□ -0.64
SNIP1-204ENST00000638725 NXNL1Q96CM4 212 aa11.07□□□□□ -0.64
SNIP1-204ENST00000638725 SGF29Q96ES7 293 aa11.07□□□□□ -0.64
SNIP1-204ENST00000638725 RHOJQ9H4E5 214 aa11.07□□□□□ -0.64
SNIP1-204ENST00000638725 AP4S1Q9Y587 144 aa11.07□□□□□ -0.64
SNIP1-204ENST00000638725 ARHGEF37A1IGU5 675 aa11.06□□□□□ -0.64
SNIP1-204ENST00000638725 C9IYK1 514 aa11.06□□□□□ -0.64
SNIP1-204ENST00000638725 XPO1O14980 1071 aaKnown RBP11.06□□□□□ -0.64
SNIP1-204ENST00000638725 PGK1P00558 417 aa11.06□□□□□ -0.64
SNIP1-204ENST00000638725 AHSGP02765 367 aa11.06□□□□□ -0.64
SNIP1-204ENST00000638725 SCNN1BP51168 640 aa11.06□□□□□ -0.64
SNIP1-204ENST00000638725 CLCN2P51788 898 aa11.06□□□□□ -0.64
SNIP1-204ENST00000638725 PRKAA2P54646 552 aa11.06□□□□□ -0.64
SNIP1-204ENST00000638725 TPI1P60174 286 aa11.06□□□□□ -0.64
SNIP1-204ENST00000638725 ARHGAP1Q07960 439 aa11.06□□□□□ -0.64
SNIP1-204ENST00000638725 PPIDQ08752 370 aaKnown RBP11.06□□□□□ -0.64
SNIP1-204ENST00000638725 TMEM62Q0P6H9 643 aa11.06□□□□□ -0.64
SNIP1-204ENST00000638725 SLC12A1Q13621 1099 aa11.06□□□□□ -0.64
SNIP1-204ENST00000638725 FBXO47Q5MNV8 452 aa11.06□□□□□ -0.64
SNIP1-204ENST00000638725 BNIPLQ7Z465 357 aa11.06□□□□□ -0.64
SNIP1-204ENST00000638725 HMGCLL1Q8TB92 370 aa11.06□□□□□ -0.64
SNIP1-204ENST00000638725 WNT8BQ93098 351 aa11.06□□□□□ -0.64
SNIP1-204ENST00000638725 NT5C3BQ969T7 300 aa11.06□□□□□ -0.64
SNIP1-204ENST00000638725 ASB9Q96DX5 294 aa11.06□□□□□ -0.64
SNIP1-204ENST00000638725 CCT7Q99832 543 aa11.06□□□□□ -0.64
SNIP1-204ENST00000638725 SNX25Q9H3E2 840 aa11.06□□□□□ -0.64
SNIP1-204ENST00000638725 LIN28AQ9H9Z2 209 aaKnown RBP11.06□□□□□ -0.64
SNIP1-204ENST00000638725 PADI4Q9UM07 663 aa11.06□□□□□ -0.64
SNIP1-204ENST00000638725 HEMK1Q9Y5R4 338 aaPredicted RBP11.06□□□□□ -0.64
SNIP1-204ENST00000638725 PAPPA2Q9BXP8 1791 aa11.06□□□□□ -0.64
SNIP1-204ENST00000638725 PFDN1O60925 122 aa11.06□□□□□ -0.64
SNIP1-204ENST00000638725 NPY2RP49146 381 aa11.06□□□□□ -0.64
SNIP1-204ENST00000638725 GALK1P51570 392 aa11.06□□□□□ -0.64
SNIP1-204ENST00000638725 EMP3P54852 163 aa11.06□□□□□ -0.64
SNIP1-204ENST00000638725 MPP1Q00013 466 aa11.06□□□□□ -0.64
SNIP1-204ENST00000638725 PDAP1Q13442 181 aaKnown RBP11.06□□□□□ -0.64
SNIP1-204ENST00000638725 IKBKEQ14164 716 aa11.06□□□□□ -0.64
SNIP1-204ENST00000638725 FAM219BQ5XKK7 198 aa11.06□□□□□ -0.64
SNIP1-204ENST00000638725 CEP97Q8IW35 865 aa11.06□□□□□ -0.64
SNIP1-204ENST00000638725 MFSD6LQ8IWD5 586 aa11.06□□□□□ -0.64
SNIP1-204ENST00000638725 DENND6AQ8IWF6 608 aa11.06□□□□□ -0.64
SNIP1-204ENST00000638725 MYO1HQ8N1T3 1032 aa11.06□□□□□ -0.64
SNIP1-204ENST00000638725 TRIML2Q8N7C3 387 aa11.06□□□□□ -0.64
SNIP1-204ENST00000638725 SNX31Q8N9S9 440 aa11.06□□□□□ -0.64
SNIP1-204ENST00000638725 ZNF597Q96LX8 424 aa11.06□□□□□ -0.64
SNIP1-204ENST00000638725 TRPV6Q9H1D0 765 aa11.06□□□□□ -0.64
SNIP1-204ENST00000638725 NXF3Q9H4D5 531 aaKnown RBP11.06□□□□□ -0.64
SNIP1-204ENST00000638725 PLEKHA5Q9HAU0 1116 aa11.06□□□□□ -0.64
SNIP1-204ENST00000638725 GOLGA2P5Q9HBQ8 144 aa11.06□□□□□ -0.64
SNIP1-204ENST00000638725 DNAAF2Q9NVR5 837 aaKnown RBP11.06□□□□□ -0.64
SNIP1-204ENST00000638725 GTSE1Q9NYZ3 720 aa11.06□□□□□ -0.64
SNIP1-204ENST00000638725 CNOT11Q9UKZ1 510 aaKnown RBP11.06□□□□□ -0.64
SNIP1-204ENST00000638725 STAP1Q9ULZ2 295 aa11.06□□□□□ -0.64
SNIP1-204ENST00000638725 DERAQ9Y315 318 aa11.06□□□□□ -0.64
SNIP1-204ENST00000638725 SHROOM3Q8TF72 1996 aa11.05□□□□□ -0.64
SNIP1-204ENST00000638725 NEMP2A6NFY4 417 aa11.05□□□□□ -0.64
SNIP1-204ENST00000638725 IRF6O14896 467 aa11.05□□□□□ -0.64
SNIP1-204ENST00000638725 HNRNPLP14866 589 aaKnown RBP eCLIP11.05□□□□□ -0.64
SNIP1-204ENST00000638725 AKAP5P24588 427 aa11.05□□□□□ -0.64
SNIP1-204ENST00000638725 HOXA11P31270 313 aaPredicted RBP11.05□□□□□ -0.64
SNIP1-204ENST00000638725 ADRA1BP35368 520 aa11.05□□□□□ -0.64
SNIP1-204ENST00000638725 CTBP1Q13363 440 aa11.05□□□□□ -0.64
SNIP1-204ENST00000638725 TRIM25Q14258 630 aaKnown RBP11.05□□□□□ -0.64
SNIP1-204ENST00000638725 KCTD2Q14681 263 aa11.05□□□□□ -0.64
SNIP1-204ENST00000638725 DCAF4L1Q3SXM0 396 aa11.05□□□□□ -0.64
SNIP1-204ENST00000638725 MTX3Q5HYI7 312 aa11.05□□□□□ -0.64
SNIP1-204ENST00000638725 CNSTQ6PJW8 725 aa11.05□□□□□ -0.64
SNIP1-204ENST00000638725 CYP2R1Q6VVX0 501 aa11.05□□□□□ -0.64
SNIP1-204ENST00000638725 SULF1Q8IWU6 871 aa11.05□□□□□ -0.64
SNIP1-204ENST00000638725 LPGAT1Q92604 370 aa11.05□□□□□ -0.64
SNIP1-204ENST00000638725 MAELQ96JY0 434 aaKnown RBP11.05□□□□□ -0.64
SNIP1-204ENST00000638725 SLC29A1Q99808 456 aa11.05□□□□□ -0.64
SNIP1-204ENST00000638725 CAAP1Q9H8G2 361 aa11.05□□□□□ -0.64
SNIP1-204ENST00000638725 TIMMDC1Q9NPL8 285 aa11.05□□□□□ -0.64
SNIP1-204ENST00000638725 ACOT9Q9Y305 439 aa11.05□□□□□ -0.64
SNIP1-204ENST00000638725 SNX13Q9Y5W8 968 aa11.05□□□□□ -0.64
SNIP1-204ENST00000638725 SNX10Q9Y5X0 201 aa11.05□□□□□ -0.64
SNIP1-204ENST00000638725 TNS1Q9HBL0 1735 aaKnown RBP11.05□□□□□ -0.64
SNIP1-204ENST00000638725 DNAJC25-GNG10A0A024R161 153 aa11.05□□□□□ -0.64
SNIP1-204ENST00000638725 MAGEB16A2A368 324 aa11.05□□□□□ -0.64
SNIP1-204ENST00000638725 ERI2A8K979 691 aaKnown RBP11.05□□□□□ -0.64
SNIP1-204ENST00000638725 C8BP07358 591 aa11.05□□□□□ -0.64
SNIP1-204ENST00000638725 HSPA1AP0DMV8 641 aaKnown RBP11.05□□□□□ -0.64
SNIP1-204ENST00000638725 HSPA1BP0DMV9 641 aaKnown RBP11.05□□□□□ -0.64
SNIP1-204ENST00000638725 ZNF23P17027 643 aa11.05□□□□□ -0.64
SNIP1-204ENST00000638725 EPHX2P34913 555 aa11.05□□□□□ -0.64
SNIP1-204ENST00000638725 HADHAP40939 763 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms