RNA–Protein interactions for RNA: ENST00000637927.1

CACNA1A-253, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 6,847 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-253ENST00000637927 DNASE1L3Q13609 305 aa17.18■□□□□ 0.34
CACNA1A-253ENST00000637927 FBXO47Q5MNV8 452 aa17.18■□□□□ 0.34
CACNA1A-253ENST00000637927 UBE2J2Q8N2K1 259 aa17.18■□□□□ 0.34
CACNA1A-253ENST00000637927 TRIM2Q9C040 744 aa17.18■□□□□ 0.34
CACNA1A-253ENST00000637927 SLC40A1Q9NP59 571 aa17.18■□□□□ 0.34
CACNA1A-253ENST00000637927 NKIRAS2Q9NYR9 191 aa17.18■□□□□ 0.34
CACNA1A-253ENST00000637927 BCORL1Q5H9F3 1711 aa17.18■□□□□ 0.34
CACNA1A-253ENST00000637927 PLA2R1Q13018 1463 aa17.18■□□□□ 0.34
CACNA1A-253ENST00000637927 RTN3O95197 1032 aaPredicted RBP17.18■□□□□ 0.34
CACNA1A-253ENST00000637927 NQO1P15559 274 aaKnown RBP17.18■□□□□ 0.34
CACNA1A-253ENST00000637927 WARSP23381 471 aaKnown RBP17.18■□□□□ 0.34
CACNA1A-253ENST00000637927 LPCAT2Q7L5N7 544 aa17.18■□□□□ 0.34
CACNA1A-253ENST00000637927 CLIP4Q8N3C7 705 aa17.18■□□□□ 0.34
CACNA1A-253ENST00000637927 AGBL3Q8NEM8 1001 aa17.18■□□□□ 0.34
CACNA1A-253ENST00000637927 MAGEE2Q8TD90 523 aaPredicted RBP17.18■□□□□ 0.34
CACNA1A-253ENST00000637927 ATP8B4Q8TF62 1192 aa17.18■□□□□ 0.34
CACNA1A-253ENST00000637927 FAR1Q8WVX9 515 aa17.18■□□□□ 0.34
CACNA1A-253ENST00000637927 CENPIQ92674 756 aaPredicted RBP17.18■□□□□ 0.34
CACNA1A-253ENST00000637927 CNOT6Q9ULM6 557 aaKnown RBP17.18■□□□□ 0.34
CACNA1A-253ENST00000637927 RBAK-RBAKDNI3L0D1 243 aa17.18■□□□□ 0.34
CACNA1A-253ENST00000637927 KCNA5P22460 613 aa17.18■□□□□ 0.34
CACNA1A-253ENST00000637927 TRIM40Q6P9F5 258 aa17.18■□□□□ 0.34
CACNA1A-253ENST00000637927 FATE1Q969F0 183 aa17.18■□□□□ 0.34
CACNA1A-253ENST00000637927 MRPL17Q9NRX2 175 aaKnown RBP17.18■□□□□ 0.34
CACNA1A-253ENST00000637927 AHSPQ9NZD4 102 aa17.18■□□□□ 0.34
CACNA1A-253ENST00000637927 PCDHB5Q9Y5E4 795 aa17.18■□□□□ 0.34
CACNA1A-253ENST00000637927 TULP4Q9NRJ4 1543 aa17.18■□□□□ 0.34
CACNA1A-253ENST00000637927 MBD5Q9P267 1494 aa17.18■□□□□ 0.34
CACNA1A-253ENST00000637927 PIK3CDO00329 1044 aa17.18■□□□□ 0.34
CACNA1A-253ENST00000637927 NTSP30990 170 aa17.18■□□□□ 0.34
CACNA1A-253ENST00000637927 MAT2AP31153 395 aaKnown RBP17.18■□□□□ 0.34
CACNA1A-253ENST00000637927 MSANTD1Q6ZTZ1 278 aa17.18■□□□□ 0.34
CACNA1A-253ENST00000637927 SCUBE1Q8IWY4 988 aa17.18■□□□□ 0.34
CACNA1A-253ENST00000637927 CDCA5Q96FF9 252 aa17.18■□□□□ 0.34
CACNA1A-253ENST00000637927 SGSM3Q96HU1 749 aa17.18■□□□□ 0.34
CACNA1A-253ENST00000637927 ZNF879B4DU55 563 aa17.18■□□□□ 0.34
CACNA1A-253ENST00000637927 FCHO1O14526 889 aa17.18■□□□□ 0.34
CACNA1A-253ENST00000637927 GNA13Q14344 377 aa17.18■□□□□ 0.34
CACNA1A-253ENST00000637927 ZDHHC20Q5W0Z9 365 aa17.18■□□□□ 0.34
CACNA1A-253ENST00000637927 C5orf34Q96MH7 638 aa17.18■□□□□ 0.34
CACNA1A-253ENST00000637927 LRRC40Q9H9A6 602 aa17.18■□□□□ 0.34
CACNA1A-253ENST00000637927 RAD51BO15315 384 aa17.17■□□□□ 0.34
CACNA1A-253ENST00000637927 SGTAO43765 313 aa17.17■□□□□ 0.34
CACNA1A-253ENST00000637927 TLL1O43897 1013 aa17.17■□□□□ 0.34
CACNA1A-253ENST00000637927 IFNA14P01570 189 aa17.17■□□□□ 0.34
CACNA1A-253ENST00000637927 CCNYL3P0C7X3 344 aa17.17■□□□□ 0.34
CACNA1A-253ENST00000637927 GJA1P17302 382 aa17.17■□□□□ 0.34
CACNA1A-253ENST00000637927 CNTN2Q02246 1040 aa17.17■□□□□ 0.34
CACNA1A-253ENST00000637927 CEP44Q9C0F1 390 aa17.17■□□□□ 0.34
CACNA1A-253ENST00000637927 POLE3Q9NRF9 147 aa17.17■□□□□ 0.34
CACNA1A-253ENST00000637927 DMGDHQ9UI17 866 aaKnown RBP17.17■□□□□ 0.34
CACNA1A-253ENST00000637927 PSMD13Q9UNM6 376 aa17.17■□□□□ 0.34
CACNA1A-253ENST00000637927 CCT8L1PA6NM43 557 aa17.17■□□□□ 0.34
CACNA1A-253ENST00000637927 ZBTB14O43829 449 aa17.17■□□□□ 0.34
CACNA1A-253ENST00000637927 BST2Q10589 180 aaKnown RBP17.17■□□□□ 0.34
CACNA1A-253ENST00000637927 FSTL1Q12841 308 aa17.17■□□□□ 0.34
CACNA1A-253ENST00000637927 CRY1Q16526 586 aa17.17■□□□□ 0.34
CACNA1A-253ENST00000637927 EIF2S3LQ2VIR3 472 aaKnown RBP17.17■□□□□ 0.34
CACNA1A-253ENST00000637927 PCNX4Q63HM2 1172 aa17.17■□□□□ 0.34
CACNA1A-253ENST00000637927 ZNF433Q8N7K0 673 aaPredicted RBP17.17■□□□□ 0.34
CACNA1A-253ENST00000637927 FBXO15Q8NCQ5 510 aaPredicted RBP17.17■□□□□ 0.34
CACNA1A-253ENST00000637927 ABCB9Q9NP78 766 aa17.17■□□□□ 0.34
CACNA1A-253ENST00000637927 HYKKA2RU49 373 aa17.17■□□□□ 0.34
CACNA1A-253ENST00000637927 PRMT3O60678 531 aa17.17■□□□□ 0.34
CACNA1A-253ENST00000637927 ZNF189O75820 626 aaPredicted RBP17.17■□□□□ 0.34
CACNA1A-253ENST00000637927 NPNTQ6UXI9 565 aa17.17■□□□□ 0.34
CACNA1A-253ENST00000637927 FBXO39Q8N4B4 442 aa17.17■□□□□ 0.34
CACNA1A-253ENST00000637927 ZNF285Q96NJ3 590 aa17.17■□□□□ 0.34
CACNA1A-253ENST00000637927 FCRL4Q96PJ5 515 aa17.17■□□□□ 0.34
CACNA1A-253ENST00000637927 RASSF1Q9NS23 344 aa17.17■□□□□ 0.34
CACNA1A-253ENST00000637927 TRMT13Q9NUP7 481 aaKnown RBP17.17■□□□□ 0.34
CACNA1A-253ENST00000637927 SLC12A4Q9UP95 1085 aa17.17■□□□□ 0.34
CACNA1A-253ENST00000637927 LYNP07948 512 aa17.17■□□□□ 0.34
CACNA1A-253ENST00000637927 NR2F1P10589 423 aa17.17■□□□□ 0.34
CACNA1A-253ENST00000637927 DNASE1L1P49184 302 aa17.17■□□□□ 0.34
CACNA1A-253ENST00000637927 FASTKQ14296 549 aaKnown RBP17.17■□□□□ 0.34
CACNA1A-253ENST00000637927 ABHD5Q8WTS1 349 aa17.17■□□□□ 0.34
CACNA1A-253ENST00000637927 GAL3ST4Q96RP7 486 aa17.17■□□□□ 0.34
CACNA1A-253ENST00000637927 PTPN18Q99952 460 aa17.17■□□□□ 0.34
CACNA1A-253ENST00000637927 MTA3Q9BTC8 594 aa17.17■□□□□ 0.34
CACNA1A-253ENST00000637927 LRPAP1P30533 357 aa17.17■□□□□ 0.34
CACNA1A-253ENST00000637927 CRY2Q49AN0 593 aa17.17■□□□□ 0.34
CACNA1A-253ENST00000637927 BOLA3Q53S33 107 aa17.17■□□□□ 0.34
CACNA1A-253ENST00000637927 CDYL2Q8N8U2 506 aa17.17■□□□□ 0.34
CACNA1A-253ENST00000637927 OR52L1Q8NGH7 329 aa17.17■□□□□ 0.34
CACNA1A-253ENST00000637927 SERPINB12Q96P63 405 aa17.17■□□□□ 0.34
CACNA1A-253ENST00000637927 HTATIP2Q9BUP3 242 aa17.17■□□□□ 0.34
CACNA1A-253ENST00000637927 A0A1W2PQJ5 194 aa17.16■□□□□ 0.34
CACNA1A-253ENST00000637927 CHRNGP07510 517 aa17.16■□□□□ 0.34
CACNA1A-253ENST00000637927 PERM1Q5SV97 790 aa17.16■□□□□ 0.34
CACNA1A-253ENST00000637927 FAM91A1Q658Y4 838 aa17.16■□□□□ 0.34
CACNA1A-253ENST00000637927 TMEM132CQ8N3T6 1108 aa17.16■□□□□ 0.34
CACNA1A-253ENST00000637927 METTL6Q8TCB7 284 aa17.16■□□□□ 0.34
CACNA1A-253ENST00000637927 PLK2Q9NYY3 685 aa17.16■□□□□ 0.34
CACNA1A-253ENST00000637927 VPS9D1Q9Y2B5 631 aa17.16■□□□□ 0.34
CACNA1A-253ENST00000637927 GAKO14976 1311 aa17.16■□□□□ 0.34
CACNA1A-253ENST00000637927 SLC28A2O43868 658 aa17.16■□□□□ 0.34
CACNA1A-253ENST00000637927 CCNOP22674 350 aa17.16■□□□□ 0.34
CACNA1A-253ENST00000637927 HERVK_113P62684 666 aa17.16■□□□□ 0.34
CACNA1A-253ENST00000637927 FAM98BQ52LJ0 330 aaKnown RBP17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms