RNA–Protein interactions for RNA: ENST00000636214.1

PNKP-225, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 805 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-225ENST00000636214 CXorf51AA0A1B0GTR3 108 aa18.26■□□□□ 0.51
PNKP-225ENST00000636214 ZSCAN5CA6NGD5 496 aaPredicted RBP18.26■□□□□ 0.51
PNKP-225ENST00000636214 LRRC10BA6NIK2 292 aa18.26■□□□□ 0.51
PNKP-225ENST00000636214 SIGLEC16A6NMB1 481 aa18.26■□□□□ 0.51
PNKP-225ENST00000636214 SRRM3A6NNA2 597 aaPredicted RBP18.26■□□□□ 0.51
PNKP-225ENST00000636214 SMTNL1A8MU46 457 aa18.26■□□□□ 0.51
PNKP-225ENST00000636214 ZMPSTE24O75844 475 aa18.26■□□□□ 0.51
PNKP-225ENST00000636214 THEGLP0DJG4 465 aa18.26■□□□□ 0.51
PNKP-225ENST00000636214 CDK4P11802 303 aa18.26■□□□□ 0.51
PNKP-225ENST00000636214 TNFAIP3P21580 790 aa18.26■□□□□ 0.51
PNKP-225ENST00000636214 HNRNPA2B1P22626 353 aaKnown RBP18.26■□□□□ 0.51
PNKP-225ENST00000636214 ITGB7P26010 798 aa18.26■□□□□ 0.51
PNKP-225ENST00000636214 ACVRL1P37023 503 aa18.26■□□□□ 0.51
PNKP-225ENST00000636214 RXRGP48443 463 aa18.26■□□□□ 0.51
PNKP-225ENST00000636214 HDAC4P56524 1084 aa18.26■□□□□ 0.51
PNKP-225ENST00000636214 TAS2R38P59533 333 aa18.26■□□□□ 0.51
PNKP-225ENST00000636214 SNRPD1P62314 119 aaKnown RBP18.26■□□□□ 0.51
PNKP-225ENST00000636214 ARF5P84085 180 aa18.26■□□□□ 0.51
PNKP-225ENST00000636214 PTP4A2Q12974 167 aa18.26■□□□□ 0.51
PNKP-225ENST00000636214 RAB6CQ53S08 254 aa18.26■□□□□ 0.51
PNKP-225ENST00000636214 MANEALQ5VSG8 457 aa18.26■□□□□ 0.51
PNKP-225ENST00000636214 MON1BQ7L1V2 547 aa18.26■□□□□ 0.51
PNKP-225ENST00000636214 CCDC185Q8N715 623 aa18.26■□□□□ 0.51
PNKP-225ENST00000636214 CENPIQ92674 756 aaPredicted RBP18.26■□□□□ 0.51
PNKP-225ENST00000636214 ARHGEF2Q92974 986 aaKnown RBP18.26■□□□□ 0.51
PNKP-225ENST00000636214 FEM1CQ96JP0 617 aa18.26■□□□□ 0.51
PNKP-225ENST00000636214 MCEEQ96PE7 176 aa18.26■□□□□ 0.51
PNKP-225ENST00000636214 RAB6CQ9H0N0 254 aa18.26■□□□□ 0.51
PNKP-225ENST00000636214 HECAQ9UBI9 543 aaPredicted RBP18.26■□□□□ 0.51
PNKP-225ENST00000636214 PCDHGA1Q9Y5H4 931 aa18.26■□□□□ 0.51
PNKP-225ENST00000636214 WASF2Q9Y6W5 498 aa18.26■□□□□ 0.51
PNKP-225ENST00000636214 SPEGQ15772 3267 aa18.25■□□□□ 0.51
PNKP-225ENST00000636214 APC2O95996 2303 aa18.25■□□□□ 0.51
PNKP-225ENST00000636214 NEMP1O14524 444 aa18.25■□□□□ 0.51
PNKP-225ENST00000636214 CCP110O43303 1012 aa18.25■□□□□ 0.51
PNKP-225ENST00000636214 RFPL3O75679 317 aa18.25■□□□□ 0.51
PNKP-225ENST00000636214 DKK1O94907 266 aa18.25■□□□□ 0.51
PNKP-225ENST00000636214 ADRB3P13945 408 aa18.25■□□□□ 0.51
PNKP-225ENST00000636214 EPHB2P29323 1055 aa18.25■□□□□ 0.51
PNKP-225ENST00000636214 L1CAMP32004 1257 aa18.25■□□□□ 0.51
PNKP-225ENST00000636214 HNF1BP35680 557 aa18.25■□□□□ 0.51
PNKP-225ENST00000636214 ZNF143P52747 638 aaPredicted RBP18.25■□□□□ 0.51
PNKP-225ENST00000636214 RPS21P63220 83 aaKnown RBP18.25■□□□□ 0.51
PNKP-225ENST00000636214 RAD51Q06609 339 aa18.25■□□□□ 0.51
PNKP-225ENST00000636214 MAPK8IP2Q13387 824 aaPredicted RBP18.25■□□□□ 0.51
PNKP-225ENST00000636214 ANO6Q4KMQ2 910 aa18.25■□□□□ 0.51
PNKP-225ENST00000636214 KIAA1161Q6NSJ0 714 aa18.25■□□□□ 0.51
PNKP-225ENST00000636214 DHRS13Q6UX07 377 aa18.25■□□□□ 0.51
PNKP-225ENST00000636214 ZSCAN30Q86W11 494 aa18.25■□□□□ 0.51
PNKP-225ENST00000636214 NLRP14Q86W24 1093 aa18.25■□□□□ 0.51
PNKP-225ENST00000636214 FAM174AQ8TBP5 190 aa18.25■□□□□ 0.51
PNKP-225ENST00000636214 ISG20Q96AZ6 181 aaKnown RBP18.25■□□□□ 0.51
PNKP-225ENST00000636214 CALN1Q9BXU9 219 aa18.25■□□□□ 0.51
PNKP-225ENST00000636214 CATSPERBQ9H7T0 1116 aa18.25■□□□□ 0.51
PNKP-225ENST00000636214 CA5BQ9Y2D0 317 aa18.25■□□□□ 0.51
PNKP-225ENST00000636214 COL5A1P20908 1838 aaPredicted RBP18.25■□□□□ 0.51
PNKP-225ENST00000636214 PLXNB3Q9ULL4 1909 aa18.25■□□□□ 0.51
PNKP-225ENST00000636214 TDRD6O60522 2096 aaKnown RBP18.24■□□□□ 0.51
PNKP-225ENST00000636214 FAM72CH0Y354 149 aa18.24■□□□□ 0.51
PNKP-225ENST00000636214 KRIT1O00522 736 aa18.24■□□□□ 0.51
PNKP-225ENST00000636214 BUB1O43683 1085 aa18.24■□□□□ 0.51
PNKP-225ENST00000636214 CREB3O43889 395 aa18.24■□□□□ 0.51
PNKP-225ENST00000636214 GSRP00390 522 aa18.24■□□□□ 0.51
PNKP-225ENST00000636214 C1SP09871 688 aa18.24■□□□□ 0.51
PNKP-225ENST00000636214 AIF1P55008 147 aa18.24■□□□□ 0.51
PNKP-225ENST00000636214 BNIP3Q12983 259 aa18.24■□□□□ 0.51
PNKP-225ENST00000636214 SGCGQ13326 291 aa18.24■□□□□ 0.51
PNKP-225ENST00000636214 NCAPHQ15003 741 aa18.24■□□□□ 0.51
PNKP-225ENST00000636214 SHBQ15464 509 aa18.24■□□□□ 0.51
PNKP-225ENST00000636214 ZNF284Q2VY69 593 aa18.24■□□□□ 0.51
PNKP-225ENST00000636214 FAM72AQ5TYM5 149 aa18.24■□□□□ 0.51
PNKP-225ENST00000636214 ACAD10Q6JQN1 1059 aa18.24■□□□□ 0.51
PNKP-225ENST00000636214 FAM72DQ6L9T8 149 aa18.24■□□□□ 0.51
PNKP-225ENST00000636214 PTAR1Q7Z6K3 402 aaPredicted RBP18.24■□□□□ 0.51
PNKP-225ENST00000636214 FAM72BQ86X60 149 aa18.24■□□□□ 0.51
PNKP-225ENST00000636214 PROSER1Q86XN7 944 aa18.24■□□□□ 0.51
PNKP-225ENST00000636214 SPATS2Q86XZ4 545 aaKnown RBP18.24■□□□□ 0.51
PNKP-225ENST00000636214 PLPP6Q8IY26 295 aa18.24■□□□□ 0.51
PNKP-225ENST00000636214 TMEM145Q8NBT3 493 aa18.24■□□□□ 0.51
PNKP-225ENST00000636214 LRIG1Q96JA1 1093 aa18.24■□□□□ 0.51
PNKP-225ENST00000636214 CNPY3Q9BT09 278 aa18.24■□□□□ 0.51
PNKP-225ENST00000636214 FZD3Q9NPG1 666 aa18.24■□□□□ 0.51
PNKP-225ENST00000636214 NDFIP2Q9NV92 336 aa18.24■□□□□ 0.51
PNKP-225ENST00000636214 DONSONQ9NYP3 566 aa18.24■□□□□ 0.51
PNKP-225ENST00000636214 MYO6Q9UM54 1294 aa18.24■□□□□ 0.51
PNKP-225ENST00000636214 CHD5Q8TDI0 1954 aa18.24■□□□□ 0.51
PNKP-225ENST00000636214 ARID1BQ8NFD5 2236 aaPredicted RBP18.23■□□□□ 0.51
PNKP-225ENST00000636214 DMXL2Q8TDJ6 3036 aa18.23■□□□□ 0.51
PNKP-225ENST00000636214 ZZEF1O43149 2961 aa18.23■□□□□ 0.51
PNKP-225ENST00000636214 A6NNZ2 444 aa18.23■□□□□ 0.51
PNKP-225ENST00000636214 SDC3O75056 442 aa18.23■□□□□ 0.51
PNKP-225ENST00000636214 ZNF821O75541 412 aaPredicted RBP18.23■□□□□ 0.51
PNKP-225ENST00000636214 ATP1A3P13637 1013 aa18.23■□□□□ 0.51
PNKP-225ENST00000636214 SEL1L3Q68CR1 1132 aa18.23■□□□□ 0.51
PNKP-225ENST00000636214 PARS2Q7L3T8 475 aaKnown RBP18.23■□□□□ 0.51
PNKP-225ENST00000636214 TMPRSS12Q86WS5 348 aa18.23■□□□□ 0.51
PNKP-225ENST00000636214 MCOLN2Q8IZK6 566 aa18.23■□□□□ 0.51
PNKP-225ENST00000636214 RTL3Q8N8U3 475 aaKnown RBP18.23■□□□□ 0.51
PNKP-225ENST00000636214 OR2AP1Q8NGE2 309 aa18.23■□□□□ 0.51
PNKP-225ENST00000636214 OR6K2Q8NGY2 324 aa18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms