RNA–Protein interactions for RNA: ENST00000630925.1

SDCBP-213, Transcript of syndecan binding protein, humanhuman

TSL 5 BASIC

Gene SDCBP, Length 2,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-213ENST00000630925 CYLC2Q14093 348 aaPredicted RBP4.97□□□□□ -1.61
SDCBP-213ENST00000630925 KARSQ15046 597 aaKnown RBP4.97□□□□□ -1.61
SDCBP-213ENST00000630925 STK38Q15208 465 aa4.97□□□□□ -1.61
SDCBP-213ENST00000630925 ZMYND11Q15326 602 aa4.97□□□□□ -1.61
SDCBP-213ENST00000630925 NFIL3Q16649 462 aa4.97□□□□□ -1.61
SDCBP-213ENST00000630925 GNASQ5JWF2 1037 aa4.97□□□□□ -1.61
SDCBP-213ENST00000630925 PRAMEF20Q5VT98 475 aa4.97□□□□□ -1.61
SDCBP-213ENST00000630925 TTI2Q6NXR4 508 aa4.97□□□□□ -1.61
SDCBP-213ENST00000630925 BEND4Q6ZU67 534 aa4.97□□□□□ -1.61
SDCBP-213ENST00000630925 PIK3AP1Q6ZUJ8 805 aa4.97□□□□□ -1.61
SDCBP-213ENST00000630925 SYT13Q7L8C5 426 aa4.97□□□□□ -1.61
SDCBP-213ENST00000630925 SPATA19Q7Z5L4 167 aa4.97□□□□□ -1.61
SDCBP-213ENST00000630925 KBTBD6Q86V97 674 aa4.97□□□□□ -1.61
SDCBP-213ENST00000630925 ARFGAP2Q8N6H7 521 aa4.97□□□□□ -1.61
SDCBP-213ENST00000630925 TTLL6Q8N841 843 aa4.97□□□□□ -1.61
SDCBP-213ENST00000630925 C3orf20Q8ND61 904 aa4.97□□□□□ -1.61
SDCBP-213ENST00000630925 PANK1Q8TE04 598 aa4.97□□□□□ -1.61
SDCBP-213ENST00000630925 WHAMMQ8TF30 809 aa4.97□□□□□ -1.61
SDCBP-213ENST00000630925 RSC1A1Q92681 617 aa4.97□□□□□ -1.61
SDCBP-213ENST00000630925 TMEM186Q96B77 213 aa4.97□□□□□ -1.61
SDCBP-213ENST00000630925 C14orf79Q96F83 325 aa4.97□□□□□ -1.61
SDCBP-213ENST00000630925 C16orf92Q96LL3 132 aa4.97□□□□□ -1.61
SDCBP-213ENST00000630925 NEU1Q99519 415 aa4.97□□□□□ -1.61
SDCBP-213ENST00000630925 SH3GL3Q99963 347 aa4.97□□□□□ -1.61
SDCBP-213ENST00000630925 MCMBPQ9BTE3 642 aa4.97□□□□□ -1.61
SDCBP-213ENST00000630925 ZC3H12CQ9C0D7 883 aaKnown RBP4.97□□□□□ -1.61
SDCBP-213ENST00000630925 RNF32Q9H0A6 362 aa4.97□□□□□ -1.61
SDCBP-213ENST00000630925 RASSF4Q9H2L5 321 aa4.97□□□□□ -1.61
SDCBP-213ENST00000630925 TTYH1Q9H313 450 aaPredicted RBP4.97□□□□□ -1.61
SDCBP-213ENST00000630925 RMND5AQ9H871 391 aa4.97□□□□□ -1.61
SDCBP-213ENST00000630925 SEMA4BQ9NPR2 832 aaPredicted RBP4.97□□□□□ -1.61
SDCBP-213ENST00000630925 PRMT8Q9NR22 394 aaPredicted RBP4.97□□□□□ -1.61
SDCBP-213ENST00000630925 KCNH7Q9NS40 1196 aa4.97□□□□□ -1.61
SDCBP-213ENST00000630925 GPATCH2Q9NW75 528 aa4.97□□□□□ -1.61
SDCBP-213ENST00000630925 MBD2Q9UBB5 411 aa4.97□□□□□ -1.61
SDCBP-213ENST00000630925 LIMA1Q9UHB6 759 aaKnown RBP4.97□□□□□ -1.61
SDCBP-213ENST00000630925 OSGIN1Q9UJX0 560 aa4.97□□□□□ -1.61
SDCBP-213ENST00000630925 SARDHQ9UL12 918 aa4.97□□□□□ -1.61
SDCBP-213ENST00000630925 DNPEPQ9ULA0 475 aa4.97□□□□□ -1.61
SDCBP-213ENST00000630925 PCDHA10Q9Y5I2 948 aa4.97□□□□□ -1.61
SDCBP-213ENST00000630925 TNS2Q63HR2 1409 aa4.97□□□□□ -1.61
SDCBP-213ENST00000630925 ADGRF5Q8IZF2 1346 aa4.97□□□□□ -1.61
SDCBP-213ENST00000630925 ARHGAP35Q9NRY4 1499 aa4.97□□□□□ -1.61
SDCBP-213ENST00000630925 A0A1W2PN81 502 aa4.96□□□□□ -1.61
SDCBP-213ENST00000630925 TRIM49BA6NDI0 452 aa4.96□□□□□ -1.61
SDCBP-213ENST00000630925 C1QTNF9BB2RNN3 333 aa4.96□□□□□ -1.61
SDCBP-213ENST00000630925 E9PI62 339 aa4.96□□□□□ -1.61
SDCBP-213ENST00000630925 SLC33A1O00400 549 aaPredicted RBP4.96□□□□□ -1.61
SDCBP-213ENST00000630925 CTDSP2O14595 271 aa4.96□□□□□ -1.61
SDCBP-213ENST00000630925 SURF6O75683 361 aaKnown RBP4.96□□□□□ -1.61
SDCBP-213ENST00000630925 RASAL1O95294 804 aa4.96□□□□□ -1.61
SDCBP-213ENST00000630925 CHEK2O96017 543 aa4.96□□□□□ -1.61
SDCBP-213ENST00000630925 KRT6BP04259 564 aa4.96□□□□□ -1.61
SDCBP-213ENST00000630925 ADRA1DP25100 572 aa4.96□□□□□ -1.61
SDCBP-213ENST00000630925 PSMA5P28066 241 aa4.96□□□□□ -1.61
SDCBP-213ENST00000630925 ADH6P28332 368 aa4.96□□□□□ -1.61
SDCBP-213ENST00000630925 CCND2P30279 289 aa4.96□□□□□ -1.61
SDCBP-213ENST00000630925 CHRNA7P36544 502 aa4.96□□□□□ -1.61
SDCBP-213ENST00000630925 LTBRP36941 435 aa4.96□□□□□ -1.61
SDCBP-213ENST00000630925 KCNJ4P48050 445 aa4.96□□□□□ -1.61
SDCBP-213ENST00000630925 KRT6CP48668 564 aa4.96□□□□□ -1.61
SDCBP-213ENST00000630925 SLC11A1P49279 550 aa4.96□□□□□ -1.61
SDCBP-213ENST00000630925 CCR3P51677 355 aa4.96□□□□□ -1.61
SDCBP-213ENST00000630925 CDH8P55286 799 aa4.96□□□□□ -1.61
SDCBP-213ENST00000630925 LGALS4P56470 323 aa4.96□□□□□ -1.61
SDCBP-213ENST00000630925 SSTP61278 116 aa4.96□□□□□ -1.61
SDCBP-213ENST00000630925 TPM4P67936 248 aa4.96□□□□□ -1.61
SDCBP-213ENST00000630925 XRCC4Q13426 336 aa4.96□□□□□ -1.61
SDCBP-213ENST00000630925 NOMO1Q15155 1222 aa4.96□□□□□ -1.61
SDCBP-213ENST00000630925 CEBPEQ15744 281 aa4.96□□□□□ -1.61
SDCBP-213ENST00000630925 ADRM1Q16186 407 aa4.96□□□□□ -1.61
SDCBP-213ENST00000630925 MAN2A1Q16706 1144 aa4.96□□□□□ -1.61
SDCBP-213ENST00000630925 BTBD16Q32M84 506 aa4.96□□□□□ -1.61
SDCBP-213ENST00000630925 TEX35Q5T0J7 233 aa4.96□□□□□ -1.61
SDCBP-213ENST00000630925 GRTP1Q5TC63 336 aa4.96□□□□□ -1.61
SDCBP-213ENST00000630925 RAP1GAP2Q684P5 730 aa4.96□□□□□ -1.61
SDCBP-213ENST00000630925 MOXD1Q6UVY6 613 aa4.96□□□□□ -1.61
SDCBP-213ENST00000630925 ZNF813Q6ZN06 617 aa4.96□□□□□ -1.61
SDCBP-213ENST00000630925 KRT28Q7Z3Y7 464 aa4.96□□□□□ -1.61
SDCBP-213ENST00000630925 PLEKHH3Q7Z736 793 aa4.96□□□□□ -1.61
SDCBP-213ENST00000630925 ZNF598Q86UK7 904 aaKnown RBP4.96□□□□□ -1.61
SDCBP-213ENST00000630925 CEP57Q86XR8 500 aa4.96□□□□□ -1.61
SDCBP-213ENST00000630925 FIBCD1Q8N539 461 aa4.96□□□□□ -1.61
SDCBP-213ENST00000630925 DNAJC5GQ8N7S2 189 aa4.96□□□□□ -1.61
SDCBP-213ENST00000630925 KBTBD7Q8WVZ9 684 aa4.96□□□□□ -1.61
SDCBP-213ENST00000630925 LPIN2Q92539 896 aa4.96□□□□□ -1.61
SDCBP-213ENST00000630925 KAT2AQ92830 837 aa4.96□□□□□ -1.61
SDCBP-213ENST00000630925 ELMO3Q96BJ8 720 aa4.96□□□□□ -1.61
SDCBP-213ENST00000630925 C3orf49Q96BT1 292 aa4.96□□□□□ -1.61
SDCBP-213ENST00000630925 CCDC51Q96ER9 411 aa4.96□□□□□ -1.61
SDCBP-213ENST00000630925 ERO1AQ96HE7 468 aa4.96□□□□□ -1.61
SDCBP-213ENST00000630925 TPD52L3Q96J77 140 aa4.96□□□□□ -1.61
SDCBP-213ENST00000630925 CFAP57Q96MR6 1250 aa4.96□□□□□ -1.61
SDCBP-213ENST00000630925 RPRD1AQ96P16 312 aaPredicted RBP4.96□□□□□ -1.61
SDCBP-213ENST00000630925 PPP1R10Q96QC0 940 aaKnown RBP4.96□□□□□ -1.61
SDCBP-213ENST00000630925 ZBTB18Q99592 522 aa4.96□□□□□ -1.61
SDCBP-213ENST00000630925 PKP2Q99959 881 aa4.96□□□□□ -1.61
SDCBP-213ENST00000630925 MGME1Q9BQP7 344 aa4.96□□□□□ -1.61
SDCBP-213ENST00000630925 PIMREGQ9BSJ6 248 aa4.96□□□□□ -1.61
SDCBP-213ENST00000630925 MTG1Q9BT17 334 aaPredicted RBP4.96□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms