RNA–Protein interactions for RNA: ENST00000627238.1

TRIM29-221, Transcript of tripartite motif containing 29, humanhuman

TSL 5 BASIC

Gene TRIM29, Length 510 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM29-221ENST00000627238 KLK6Q92876 244 aa16.83■□□□□ 0.28
TRIM29-221ENST00000627238 GRAMD1AQ96CP6 724 aa16.83■□□□□ 0.28
TRIM29-221ENST00000627238 WBP1Q96G27 269 aa16.83■□□□□ 0.28
TRIM29-221ENST00000627238 APOLD1Q96LR9 279 aa16.83■□□□□ 0.28
TRIM29-221ENST00000627238 LENG8Q96PV6 779 aaPredicted RBP16.83■□□□□ 0.28
TRIM29-221ENST00000627238 SLC17A9Q9BYT1 436 aa16.83■□□□□ 0.28
TRIM29-221ENST00000627238 RETREG1Q9H6L5 497 aa16.83■□□□□ 0.28
TRIM29-221ENST00000627238 FZD3Q9NPG1 666 aa16.83■□□□□ 0.28
TRIM29-221ENST00000627238 KIAA1468Q9P260 1216 aa16.83■□□□□ 0.28
TRIM29-221ENST00000627238 PPARGC1AQ9UBK2 798 aaKnown RBP16.83■□□□□ 0.28
TRIM29-221ENST00000627238 DNAJC12Q9UKB3 198 aa16.83■□□□□ 0.28
TRIM29-221ENST00000627238 SSUH2Q9Y2M2 353 aa16.83■□□□□ 0.28
TRIM29-221ENST00000627238 PCDHB1Q9Y5F3 818 aa16.83■□□□□ 0.28
TRIM29-221ENST00000627238 TENM4Q6N022 2769 aa16.83■□□□□ 0.28
TRIM29-221ENST00000627238 K7ESM1 405 aa16.82■□□□□ 0.28
TRIM29-221ENST00000627238 PCDH8O95206 1070 aa16.82■□□□□ 0.28
TRIM29-221ENST00000627238 PRB1P04280 392 aa16.82■□□□□ 0.28
TRIM29-221ENST00000627238 ADRB3P13945 408 aa16.82■□□□□ 0.28
TRIM29-221ENST00000627238 NME1P15531 152 aaKnown RBP16.82■□□□□ 0.28
TRIM29-221ENST00000627238 L1CAMP32004 1257 aa16.82■□□□□ 0.28
TRIM29-221ENST00000627238 RECQLP46063 649 aaPredicted RBP16.82■□□□□ 0.28
TRIM29-221ENST00000627238 LSSP48449 732 aa16.82■□□□□ 0.28
TRIM29-221ENST00000627238 SULT1E1P49888 294 aa16.82■□□□□ 0.28
TRIM29-221ENST00000627238 UCNP55089 124 aa16.82■□□□□ 0.28
TRIM29-221ENST00000627238 PCBP4P57723 403 aaKnown RBP16.82■□□□□ 0.28
TRIM29-221ENST00000627238 CLDN2P57739 230 aa16.82■□□□□ 0.28
TRIM29-221ENST00000627238 FGL2Q14314 439 aa16.82■□□□□ 0.28
TRIM29-221ENST00000627238 BECN1Q14457 450 aa16.82■□□□□ 0.28
TRIM29-221ENST00000627238 PCSK4Q6UW60 755 aa16.82■□□□□ 0.28
TRIM29-221ENST00000627238 LINGO4Q6UY18 593 aa16.82■□□□□ 0.28
TRIM29-221ENST00000627238 Q6ZSR6 202 aa16.82■□□□□ 0.28
TRIM29-221ENST00000627238 ISG20Q96AZ6 181 aaKnown RBP16.82■□□□□ 0.28
TRIM29-221ENST00000627238 TBCBQ99426 244 aa16.82■□□□□ 0.28
TRIM29-221ENST00000627238 MYOCQ99972 504 aa16.82■□□□□ 0.28
TRIM29-221ENST00000627238 NCKIPSDQ9NZQ3 722 aa16.82■□□□□ 0.28
TRIM29-221ENST00000627238 MPP6Q9NZW5 540 aa16.82■□□□□ 0.28
TRIM29-221ENST00000627238 FADS3Q9Y5Q0 445 aa16.82■□□□□ 0.28
TRIM29-221ENST00000627238 ERVH48-1M5A8F1 160 aa16.81■□□□□ 0.28
TRIM29-221ENST00000627238 FFAR2O15552 330 aa16.81■□□□□ 0.28
TRIM29-221ENST00000627238 GADD45BO75293 160 aaPredicted RBP16.81■□□□□ 0.28
TRIM29-221ENST00000627238 ENDOD1O94919 500 aa16.81■□□□□ 0.28
TRIM29-221ENST00000627238 RABIFP47224 123 aa16.81■□□□□ 0.28
TRIM29-221ENST00000627238 ARF5P84085 180 aa16.81■□□□□ 0.28
TRIM29-221ENST00000627238 FZD2Q14332 565 aa16.81■□□□□ 0.28
TRIM29-221ENST00000627238 CARD16Q5EG05 197 aa16.81■□□□□ 0.28
TRIM29-221ENST00000627238 ZCCHC8Q6NZY4 707 aaKnown RBP16.81■□□□□ 0.28
TRIM29-221ENST00000627238 TMC6Q7Z403 805 aa16.81■□□□□ 0.28
TRIM29-221ENST00000627238 TFAP2DQ7Z6R9 452 aa16.81■□□□□ 0.28
TRIM29-221ENST00000627238 PARGQ86W56 976 aa16.81■□□□□ 0.28
TRIM29-221ENST00000627238 XYLT1Q86Y38 959 aa16.81■□□□□ 0.28
TRIM29-221ENST00000627238 DENND6BQ8NEG7 585 aa16.81■□□□□ 0.28
TRIM29-221ENST00000627238 ZNF548Q8NEK5 533 aaPredicted RBP16.81■□□□□ 0.28
TRIM29-221ENST00000627238 OR7D4Q8NG98 312 aa16.81■□□□□ 0.28
TRIM29-221ENST00000627238 GRIN3AQ8TCU5 1115 aa16.81■□□□□ 0.28
TRIM29-221ENST00000627238 SNRNP27Q8WVK2 155 aaKnown RBP16.81■□□□□ 0.28
TRIM29-221ENST00000627238 RAB7BQ96AH8 199 aa16.81■□□□□ 0.28
TRIM29-221ENST00000627238 C18orf8Q96DM3 657 aa16.81■□□□□ 0.28
TRIM29-221ENST00000627238 FEM1CQ96JP0 617 aa16.81■□□□□ 0.28
TRIM29-221ENST00000627238 TBATAQ96M53 351 aa16.81■□□□□ 0.28
TRIM29-221ENST00000627238 KLF6Q99612 283 aaPredicted RBP16.81■□□□□ 0.28
TRIM29-221ENST00000627238 HEPHQ9BQS7 1158 aa16.81■□□□□ 0.28
TRIM29-221ENST00000627238 C1QTNF2Q9BXJ5 285 aa16.81■□□□□ 0.28
TRIM29-221ENST00000627238 TNKS2Q9H2K2 1166 aa16.81■□□□□ 0.28
TRIM29-221ENST00000627238 POLR1BQ9H9Y6 1135 aa16.81■□□□□ 0.28
TRIM29-221ENST00000627238 ASCL3Q9NQ33 180 aa16.81■□□□□ 0.28
TRIM29-221ENST00000627238 TMEM59LQ9UK28 342 aa16.81■□□□□ 0.28
TRIM29-221ENST00000627238 SNX10Q9Y5X0 201 aa16.81■□□□□ 0.28
TRIM29-221ENST00000627238 POM121BA6NF01 834 aa16.8■□□□□ 0.28
TRIM29-221ENST00000627238 CAPN8A6NHC0 703 aa16.8■□□□□ 0.28
TRIM29-221ENST00000627238 H3BM21 787 aa16.8■□□□□ 0.28
TRIM29-221ENST00000627238 TPP1O14773 563 aa16.8■□□□□ 0.28
TRIM29-221ENST00000627238 LSM8O95777 96 aaKnown RBP16.8■□□□□ 0.28
TRIM29-221ENST00000627238 CD160O95971 181 aa16.8■□□□□ 0.28
TRIM29-221ENST00000627238 FLT3P36888 993 aa16.8■□□□□ 0.28
TRIM29-221ENST00000627238 CCNHP51946 323 aaPredicted RBP16.8■□□□□ 0.28
TRIM29-221ENST00000627238 NRG1Q02297 640 aaPredicted RBP16.8■□□□□ 0.28
TRIM29-221ENST00000627238 CCDC173Q0VFZ6 552 aa16.8■□□□□ 0.28
TRIM29-221ENST00000627238 MAN2A1Q16706 1144 aa16.8■□□□□ 0.28
TRIM29-221ENST00000627238 FAM102AQ5T9C2 384 aaPredicted RBP16.8■□□□□ 0.28
TRIM29-221ENST00000627238 PARS2Q7L3T8 475 aaKnown RBP16.8■□□□□ 0.28
TRIM29-221ENST00000627238 PTAR1Q7Z6K3 402 aaPredicted RBP16.8■□□□□ 0.28
TRIM29-221ENST00000627238 ZNF843Q8N446 348 aa16.8■□□□□ 0.28
TRIM29-221ENST00000627238 VOPP1Q96AW1 172 aa16.8■□□□□ 0.28
TRIM29-221ENST00000627238 LGMNQ99538 433 aa16.8■□□□□ 0.28
TRIM29-221ENST00000627238 ZYG11BQ9C0D3 744 aa16.8■□□□□ 0.28
TRIM29-221ENST00000627238 PLCB1Q9NQ66 1216 aa16.8■□□□□ 0.28
TRIM29-221ENST00000627238 SALL4Q9UJQ4 1053 aa16.8■□□□□ 0.28
TRIM29-221ENST00000627238 EME2A4GXA9 379 aaPredicted RBP16.79■□□□□ 0.28
TRIM29-221ENST00000627238 TSPAN6O43657 245 aa16.79■□□□□ 0.28
TRIM29-221ENST00000627238 USP12O75317 370 aa16.79■□□□□ 0.28
TRIM29-221ENST00000627238 CSO75390 466 aaKnown RBP16.79■□□□□ 0.28
TRIM29-221ENST00000627238 PAK4O96013 591 aaPredicted RBP16.79■□□□□ 0.28
TRIM29-221ENST00000627238 PNMA6AP0CW24 399 aaPredicted RBP16.79■□□□□ 0.28
TRIM29-221ENST00000627238 CYP11B1P15538 503 aa16.79■□□□□ 0.28
TRIM29-221ENST00000627238 ETFBP38117 255 aa16.79■□□□□ 0.28
TRIM29-221ENST00000627238 TMPRSS3P57727 454 aa16.79■□□□□ 0.28
TRIM29-221ENST00000627238 RNASE9P60153 205 aaKnown RBP16.79■□□□□ 0.28
TRIM29-221ENST00000627238 PFN3P60673 137 aa16.79■□□□□ 0.28
TRIM29-221ENST00000627238 GABREP78334 506 aa16.79■□□□□ 0.28
TRIM29-221ENST00000627238 SKOR1P84550 965 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms