RNA–Protein interactions for RNA: ENST00000623461.3

VCL-206, Transcript of vinculin, humanhuman

TSL 1 (best)

Gene VCL, Length 7,995 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-206ENST00000623461 ERVK-10P10266 1014 aa9.01□□□□□ -0.97
VCL-206ENST00000623461 PIK3CGP48736 1102 aa9.01□□□□□ -0.97
VCL-206ENST00000623461 TAF6P49848 677 aa9.01□□□□□ -0.97
VCL-206ENST00000623461 FMO1Q01740 532 aa9.01□□□□□ -0.97
VCL-206ENST00000623461 ZNF829Q3KNS6 432 aaPredicted RBP9.01□□□□□ -0.97
VCL-206ENST00000623461 KCNT2Q6UVM3 1135 aa9.01□□□□□ -0.97
VCL-206ENST00000623461 KCTD8Q6ZWB6 473 aa9.01□□□□□ -0.97
VCL-206ENST00000623461 CENPNQ96H22 339 aaPredicted RBP9.01□□□□□ -0.97
VCL-206ENST00000623461 ZNF668Q96K58 619 aaPredicted RBP9.01□□□□□ -0.97
VCL-206ENST00000623461 ACOX2Q99424 681 aa9.01□□□□□ -0.97
VCL-206ENST00000623461 ACE2Q9BYF1 805 aaPredicted RBP9.01□□□□□ -0.97
VCL-206ENST00000623461 NKX1-2Q9UD57 310 aaPredicted RBP9.01□□□□□ -0.97
VCL-206ENST00000623461 PHF11Q9UIL8 331 aa9.01□□□□□ -0.97
VCL-206ENST00000623461 CRLS1Q9UJA2 301 aa9.01□□□□□ -0.97
VCL-206ENST00000623461 VWDEQ8N2E2 1590 aa9.01□□□□□ -0.97
VCL-206ENST00000623461 HADHBP55084 474 aaKnown RBP9.01□□□□□ -0.97
VCL-206ENST00000623461 RPS7P62081 194 aaKnown RBP9.01□□□□□ -0.97
VCL-206ENST00000623461 BST2Q10589 180 aaKnown RBP9.01□□□□□ -0.97
VCL-206ENST00000623461 PWP1Q13610 501 aa9.01□□□□□ -0.97
VCL-206ENST00000623461 BAATQ14032 418 aaPredicted RBP9.01□□□□□ -0.97
VCL-206ENST00000623461 KHDRBS2Q5VWX1 349 aaKnown RBP9.01□□□□□ -0.97
VCL-206ENST00000623461 ARHGAP36Q6ZRI8 547 aa9.01□□□□□ -0.97
VCL-206ENST00000623461 DNAJC19Q96DA6 116 aa9.01□□□□□ -0.97
VCL-206ENST00000623461 BAIAP2Q9UQB8 552 aa9.01□□□□□ -0.97
VCL-206ENST00000623461 BCLAF3A2AJT9 711 aaKnown RBP9.01□□□□□ -0.97
VCL-206ENST00000623461 ASB14A6NK59 587 aa9.01□□□□□ -0.97
VCL-206ENST00000623461 EPN2O95208 641 aa9.01□□□□□ -0.97
VCL-206ENST00000623461 NELFEP18615 380 aaKnown RBP9.01□□□□□ -0.97
VCL-206ENST00000623461 CAPGP40121 348 aa9.01□□□□□ -0.97
VCL-206ENST00000623461 BCAP31P51572 246 aa9.01□□□□□ -0.97
VCL-206ENST00000623461 PHC1P78364 1004 aa9.01□□□□□ -0.97
VCL-206ENST00000623461 PTP4A2Q12974 167 aa9.01□□□□□ -0.97
VCL-206ENST00000623461 DNAJC1Q96KC8 554 aaKnown RBP9.01□□□□□ -0.97
VCL-206ENST00000623461 YME1L1Q96TA2 773 aa9.01□□□□□ -0.97
VCL-206ENST00000623461 APOL2Q9BQE5 337 aa9.01□□□□□ -0.97
VCL-206ENST00000623461 CDHR5Q9HBB8 845 aa9.01□□□□□ -0.97
VCL-206ENST00000623461 ERAP1Q9NZ08 941 aa9.01□□□□□ -0.97
VCL-206ENST00000623461 TNPO3Q9Y5L0 923 aaKnown RBP9.01□□□□□ -0.97
VCL-206ENST00000623461 A0A1W2PQ72 361 aa9.01□□□□□ -0.97
VCL-206ENST00000623461 MLYCDO95822 493 aa9.01□□□□□ -0.97
VCL-206ENST00000623461 MZF1P28698 734 aaPredicted RBP9.01□□□□□ -0.97
VCL-206ENST00000623461 SCRN3Q0VDG4 424 aa9.01□□□□□ -0.97
VCL-206ENST00000623461 BMT2Q1RMZ1 405 aa9.01□□□□□ -0.97
VCL-206ENST00000623461 NDUFAF6Q330K2 333 aa9.01□□□□□ -0.97
VCL-206ENST00000623461 PRR5LQ6MZQ0 368 aa9.01□□□□□ -0.97
VCL-206ENST00000623461 METTL6Q8TCB7 284 aa9.01□□□□□ -0.97
VCL-206ENST00000623461 TRMOQ9BU70 441 aa9.01□□□□□ -0.97
VCL-206ENST00000623461 HSD3B7Q9H2F3 369 aa9.01□□□□□ -0.97
VCL-206ENST00000623461 GPRC5CQ9NQ84 441 aa9.01□□□□□ -0.97
VCL-206ENST00000623461 KCNH4Q9UQ05 1017 aa9.01□□□□□ -0.97
VCL-206ENST00000623461 POMPQ9Y244 141 aa9.01□□□□□ -0.97
VCL-206ENST00000623461 F8VP50 259 aa9□□□□□ -0.97
VCL-206ENST00000623461 ECE2O60344 883 aa9□□□□□ -0.97
VCL-206ENST00000623461 HBP1O60381 514 aa9□□□□□ -0.97
VCL-206ENST00000623461 DNAJA2O60884 412 aa9□□□□□ -0.97
VCL-206ENST00000623461 GSTM1P09488 218 aa9□□□□□ -0.97
VCL-206ENST00000623461 ITGA2P17301 1181 aa9□□□□□ -0.97
VCL-206ENST00000623461 RPS9P46781 194 aaKnown RBP9□□□□□ -0.97
VCL-206ENST00000623461 SRP54P61011 504 aaKnown RBP9□□□□□ -0.97
VCL-206ENST00000623461 STX4Q12846 297 aa9□□□□□ -0.97
VCL-206ENST00000623461 IL17AQ16552 155 aa9□□□□□ -0.97
VCL-206ENST00000623461 PCID2Q5JVF3 399 aa9□□□□□ -0.97
VCL-206ENST00000623461 GANCQ8TET4 914 aa9□□□□□ -0.97
VCL-206ENST00000623461 PWWP2AQ96N64 755 aa9□□□□□ -0.97
VCL-206ENST00000623461 HGH1Q9BTY7 390 aa9□□□□□ -0.97
VCL-206ENST00000623461 KATNAL1Q9BW62 490 aa9□□□□□ -0.97
VCL-206ENST00000623461 UNC93B1Q9H1C4 597 aa9□□□□□ -0.97
VCL-206ENST00000623461 RGS10O43665 173 aa9□□□□□ -0.97
VCL-206ENST00000623461 ZNF37AP17032 561 aaPredicted RBP9□□□□□ -0.97
VCL-206ENST00000623461 POLD2P49005 469 aa9□□□□□ -0.97
VCL-206ENST00000623461 CLCN5P51795 746 aa9□□□□□ -0.97
VCL-206ENST00000623461 SLC7A2P52569 658 aa9□□□□□ -0.97
VCL-206ENST00000623461 FBXW4P57775 412 aa9□□□□□ -0.97
VCL-206ENST00000623461 SCN1BQ07699 218 aa9□□□□□ -0.97
VCL-206ENST00000623461 IL18R1Q13478 541 aa9□□□□□ -0.97
VCL-206ENST00000623461 ZNF470Q6ECI4 717 aa9□□□□□ -0.97
VCL-206ENST00000623461 CAMKK1Q8N5S9 505 aa9□□□□□ -0.97
VCL-206ENST00000623461 SLC47A1Q96FL8 570 aa9□□□□□ -0.97
VCL-206ENST00000623461 CLPBQ9H078 707 aa9□□□□□ -0.97
VCL-206ENST00000623461 SLITRK2Q9H156 845 aa9□□□□□ -0.97
VCL-206ENST00000623461 ARHGAP28Q9P2N2 729 aa9□□□□□ -0.97
VCL-206ENST00000623461 UBQLN1Q9UMX0 589 aaKnown RBP9□□□□□ -0.97
VCL-206ENST00000623461 CORO2BQ9UQ03 480 aa9□□□□□ -0.97
VCL-206ENST00000623461 ASTN1O14525 1302 aa9□□□□□ -0.97
VCL-206ENST00000623461 LYPLA1O75608 230 aaPredicted RBP9□□□□□ -0.97
VCL-206ENST00000623461 MICAL2O94851 1124 aa9□□□□□ -0.97
VCL-206ENST00000623461 KLHL18O94889 574 aa9□□□□□ -0.97
VCL-206ENST00000623461 HMGCRP04035 888 aa9□□□□□ -0.97
VCL-206ENST00000623461 FAM86B2P0C5J1 330 aa9□□□□□ -0.97
VCL-206ENST00000623461 EPHA3P29320 983 aa9□□□□□ -0.97
VCL-206ENST00000623461 MOGQ16653 247 aa9□□□□□ -0.97
VCL-206ENST00000623461 INTS11Q5TA45 600 aaKnown RBP9□□□□□ -0.97
VCL-206ENST00000623461 SH3BP5LQ7L8J4 393 aa9□□□□□ -0.97
VCL-206ENST00000623461 PTAR1Q7Z6K3 402 aaPredicted RBP9□□□□□ -0.97
VCL-206ENST00000623461 P2RY8Q86VZ1 359 aa9□□□□□ -0.97
VCL-206ENST00000623461 SHC3Q92529 594 aa9□□□□□ -0.97
VCL-206ENST00000623461 NXNL1Q96CM4 212 aa9□□□□□ -0.97
VCL-206ENST00000623461 FAXDC2Q96IV6 333 aa9□□□□□ -0.97
VCL-206ENST00000623461 NPAS2Q99743 824 aa9□□□□□ -0.97
VCL-206ENST00000623461 C1orf21Q9H246 121 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms