RNA–Protein interactions for RNA: ENST00000622309.4

VPS11-209, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS11, Length 3,352 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-209ENST00000622309 CAND1Q86VP6 1230 aaKnown RBP8.02□□□□□ -1.12
VPS11-209ENST00000622309 OR8H2Q8N162 312 aa8.02□□□□□ -1.12
VPS11-209ENST00000622309 SLC44A5Q8NCS7 719 aa8.02□□□□□ -1.12
VPS11-209ENST00000622309 OR13F1Q8NGS4 319 aa8.02□□□□□ -1.12
VPS11-209ENST00000622309 PSMA8Q8TAA3 256 aa8.02□□□□□ -1.12
VPS11-209ENST00000622309 ZFP90Q8TF47 636 aa8.02□□□□□ -1.12
VPS11-209ENST00000622309 NSUN4Q96CB9 384 aaKnown RBP8.02□□□□□ -1.12
VPS11-209ENST00000622309 FAM20AQ96MK3 541 aa8.02□□□□□ -1.12
VPS11-209ENST00000622309 ARNT2Q9HBZ2 717 aa8.02□□□□□ -1.12
VPS11-209ENST00000622309 ABCB10Q9NRK6 738 aa8.02□□□□□ -1.12
VPS11-209ENST00000622309 TOR4AQ9NXH8 423 aa8.02□□□□□ -1.12
VPS11-209ENST00000622309 ADA2Q9NZK5 511 aa8.02□□□□□ -1.12
VPS11-209ENST00000622309 PCSK1NQ9UHG2 260 aa8.02□□□□□ -1.12
VPS11-209ENST00000622309 SCAF8Q9UPN6 1271 aaKnown RBP8.02□□□□□ -1.12
VPS11-209ENST00000622309 RNF103-CHMP3A0A140T963 221 aa8.02□□□□□ -1.13
VPS11-209ENST00000622309 POTEB3A0JP26 581 aa8.02□□□□□ -1.13
VPS11-209ENST00000622309 PDZK1P1A8MUH7 402 aa8.02□□□□□ -1.13
VPS11-209ENST00000622309 ENTPD3O75355 529 aa8.02□□□□□ -1.13
VPS11-209ENST00000622309 UGT2B4P06133 528 aa8.02□□□□□ -1.13
VPS11-209ENST00000622309 DNAJB2P25686 324 aa8.02□□□□□ -1.13
VPS11-209ENST00000622309 CACNB3P54284 484 aa8.02□□□□□ -1.13
VPS11-209ENST00000622309 TGFB2P61812 414 aa8.02□□□□□ -1.13
VPS11-209ENST00000622309 POU6F2P78424 691 aaPredicted RBP8.02□□□□□ -1.13
VPS11-209ENST00000622309 NFIAQ12857 509 aa8.02□□□□□ -1.13
VPS11-209ENST00000622309 FASTKD1Q53R41 847 aaKnown RBP8.02□□□□□ -1.13
VPS11-209ENST00000622309 VWA5B1Q5TIE3 1220 aa8.02□□□□□ -1.13
VPS11-209ENST00000622309 POTEBQ6S5H4 581 aa8.02□□□□□ -1.13
VPS11-209ENST00000622309 CRTC3Q6UUV7 619 aa8.02□□□□□ -1.13
VPS11-209ENST00000622309 SH2D5Q6ZV89 423 aa8.02□□□□□ -1.13
VPS11-209ENST00000622309 CHST15Q7LFX5 561 aaPredicted RBP8.02□□□□□ -1.13
VPS11-209ENST00000622309 KCTD20Q7Z5Y7 419 aa8.02□□□□□ -1.13
VPS11-209ENST00000622309 SLC26A11Q86WA9 606 aa8.02□□□□□ -1.13
VPS11-209ENST00000622309 TPH2Q8IWU9 490 aa8.02□□□□□ -1.13
VPS11-209ENST00000622309 RHOT1Q8IXI2 618 aa8.02□□□□□ -1.13
VPS11-209ENST00000622309 PPIL6Q8IXY8 311 aa8.02□□□□□ -1.13
VPS11-209ENST00000622309 PIK3R3Q92569 461 aa8.02□□□□□ -1.13
VPS11-209ENST00000622309 ZSCAN5AQ9BUG6 496 aa8.02□□□□□ -1.13
VPS11-209ENST00000622309 ADI1Q9BV57 179 aa8.02□□□□□ -1.13
VPS11-209ENST00000622309 TMEM117Q9H0C3 514 aa8.02□□□□□ -1.13
VPS11-209ENST00000622309 DIABLOQ9NR28 239 aa8.02□□□□□ -1.13
VPS11-209ENST00000622309 TMEM260Q9NX78 707 aa8.02□□□□□ -1.13
VPS11-209ENST00000622309 IPO11Q9UI26 975 aaKnown RBP8.02□□□□□ -1.13
VPS11-209ENST00000622309 CNTNAP4Q9C0A0 1308 aa8.02□□□□□ -1.13
VPS11-209ENST00000622309 RGSL1A5PLK6 1076 aa8.02□□□□□ -1.13
VPS11-209ENST00000622309 SAC3D1A6NKF1 404 aa8.02□□□□□ -1.13
VPS11-209ENST00000622309 MASP1P48740 699 aa8.02□□□□□ -1.13
VPS11-209ENST00000622309 NR2C2P49116 596 aa8.02□□□□□ -1.13
VPS11-209ENST00000622309 MLLT6P55198 1093 aaPredicted RBP8.02□□□□□ -1.13
VPS11-209ENST00000622309 ILF2Q12905 390 aaKnown RBP8.02□□□□□ -1.13
VPS11-209ENST00000622309 DSC3Q14574 896 aa8.02□□□□□ -1.13
VPS11-209ENST00000622309 MSS51Q4VC12 460 aa8.02□□□□□ -1.13
VPS11-209ENST00000622309 TEDDM1Q5T9Z0 273 aa8.02□□□□□ -1.13
VPS11-209ENST00000622309 ADCK1Q86TW2 530 aa8.02□□□□□ -1.13
VPS11-209ENST00000622309 SLC22A8Q8TCC7 542 aa8.02□□□□□ -1.13
VPS11-209ENST00000622309 TTC9Q92623 222 aa8.02□□□□□ -1.13
VPS11-209ENST00000622309 CLSTN3Q9BQT9 956 aa8.02□□□□□ -1.13
VPS11-209ENST00000622309 SLA2Q9H6Q3 261 aa8.02□□□□□ -1.13
VPS11-209ENST00000622309 NARFLQ9H6Q4 476 aa8.02□□□□□ -1.13
VPS11-209ENST00000622309 DHX33Q9H6R0 707 aaKnown RBP8.02□□□□□ -1.13
VPS11-209ENST00000622309 WDR41Q9HAD4 459 aa8.02□□□□□ -1.13
VPS11-209ENST00000622309 ZC4H2Q9NQZ6 224 aa8.02□□□□□ -1.13
VPS11-209ENST00000622309 PNPOQ9NVS9 261 aa8.02□□□□□ -1.13
VPS11-209ENST00000622309 SMOXQ9NWM0 555 aa8.02□□□□□ -1.13
VPS11-209ENST00000622309 DUS2Q9NX74 493 aaKnown RBP8.02□□□□□ -1.13
VPS11-209ENST00000622309 SYBUQ9NX95 663 aa8.02□□□□□ -1.13
VPS11-209ENST00000622309 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP8.02□□□□□ -1.13
VPS11-209ENST00000622309 TCAF1Q9Y4C2 921 aa8.02□□□□□ -1.13
VPS11-209ENST00000622309 PCDHAC2Q9Y5I4 1007 aa8.02□□□□□ -1.13
VPS11-209ENST00000622309 ATP6V1G2-DDX39BF2Z307 99 aa8.01□□□□□ -1.13
VPS11-209ENST00000622309 INO80B-WBP1J3KQ70 363 aa8.01□□□□□ -1.13
VPS11-209ENST00000622309 M0R3G1 203 aa8.01□□□□□ -1.13
VPS11-209ENST00000622309 HDAC3O15379 428 aa8.01□□□□□ -1.13
VPS11-209ENST00000622309 TRIM16O95361 564 aa8.01□□□□□ -1.13
VPS11-209ENST00000622309 GH2P01242 217 aa8.01□□□□□ -1.13
VPS11-209ENST00000622309 NTRK1P04629 796 aa8.01□□□□□ -1.13
VPS11-209ENST00000622309 MERTKQ12866 999 aa8.01□□□□□ -1.13
VPS11-209ENST00000622309 TAF5Q15542 800 aa8.01□□□□□ -1.13
VPS11-209ENST00000622309 DUSP7Q16829 419 aa8.01□□□□□ -1.13
VPS11-209ENST00000622309 ZC3H12BQ5HYM0 836 aaKnown RBP8.01□□□□□ -1.13
VPS11-209ENST00000622309 LYPD8Q6UX82 237 aa8.01□□□□□ -1.13
VPS11-209ENST00000622309 FBXO33Q7Z6M2 555 aa8.01□□□□□ -1.13
VPS11-209ENST00000622309 CAMK1DQ8IU85 385 aa8.01□□□□□ -1.13
VPS11-209ENST00000622309 FAM156AQ8NDB6 213 aa8.01□□□□□ -1.13
VPS11-209ENST00000622309 RSAD2Q8WXG1 361 aa8.01□□□□□ -1.13
VPS11-209ENST00000622309 SNX19Q92543 992 aa8.01□□□□□ -1.13
VPS11-209ENST00000622309 HDAC2Q92769 488 aaKnown RBP8.01□□□□□ -1.13
VPS11-209ENST00000622309 VCPIP1Q96JH7 1222 aa8.01□□□□□ -1.13
VPS11-209ENST00000622309 SERINC2Q96SA4 455 aa8.01□□□□□ -1.13
VPS11-209ENST00000622309 BOLA1Q9Y3E2 137 aa8.01□□□□□ -1.13
VPS11-209ENST00000622309 PPP2R3BQ9Y5P8 575 aa8.01□□□□□ -1.13
VPS11-209ENST00000622309 ASTN1O14525 1302 aa8.01□□□□□ -1.13
VPS11-209ENST00000622309 ATRNL1Q5VV63 1379 aa8.01□□□□□ -1.13
VPS11-209ENST00000622309 TCRBV9S1A1TA0A576 114 aa8.01□□□□□ -1.13
VPS11-209ENST00000622309 TMEM88BA6NKF7 163 aa8.01□□□□□ -1.13
VPS11-209ENST00000622309 TIPRLO75663 272 aa8.01□□□□□ -1.13
VPS11-209ENST00000622309 HTR2BP41595 481 aa8.01□□□□□ -1.13
VPS11-209ENST00000622309 YAP1P46937 504 aaKnown RBP8.01□□□□□ -1.13
VPS11-209ENST00000622309 HAAOP46952 286 aa8.01□□□□□ -1.13
VPS11-209ENST00000622309 CYP2J2P51589 502 aa8.01□□□□□ -1.13
VPS11-209ENST00000622309 GAD2Q05329 585 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms