RNA–Protein interactions for RNA: ENST00000620709.4

CD40-207, Transcript of CD40 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD40, Length 1,522 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD40-207ENST00000620709 CTAGE15A4D2H0 777 aa16.48■□□□□ 0.23
CD40-207ENST00000620709 TMEM191CA6NGB0 347 aa16.48■□□□□ 0.23
CD40-207ENST00000620709 SIGLEC16A6NMB1 481 aa16.48■□□□□ 0.23
CD40-207ENST00000620709 GOLGA8SH3BPF8 625 aa16.48■□□□□ 0.23
CD40-207ENST00000620709 ZNF185O15231 689 aa16.48■□□□□ 0.23
CD40-207ENST00000620709 DDX3YO15523 660 aaKnown RBP16.48■□□□□ 0.23
CD40-207ENST00000620709 PAGE1O75459 146 aa16.48■□□□□ 0.23
CD40-207ENST00000620709 IGHV4-34P06331 123 aa16.48■□□□□ 0.23
CD40-207ENST00000620709 CTAGE8P0CG41 777 aa16.48■□□□□ 0.23
CD40-207ENST00000620709 KRT3P12035 628 aa16.48■□□□□ 0.23
CD40-207ENST00000620709 GRIA4P48058 902 aa16.48■□□□□ 0.23
CD40-207ENST00000620709 OXCT1P55809 520 aa16.48■□□□□ 0.23
CD40-207ENST00000620709 SULT2A1Q06520 285 aa16.48■□□□□ 0.23
CD40-207ENST00000620709 SUZ12Q15022 739 aaKnown RBP16.48■□□□□ 0.23
CD40-207ENST00000620709 CCDC157Q569K6 752 aa16.48■□□□□ 0.23
CD40-207ENST00000620709 CCDC181Q5TID7 509 aa16.48■□□□□ 0.23
CD40-207ENST00000620709 CXorf57Q6NSI4 855 aaKnown RBP16.48■□□□□ 0.23
CD40-207ENST00000620709 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP16.48■□□□□ 0.23
CD40-207ENST00000620709 SND1Q7KZF4 910 aaKnown RBP eCLIP16.48■□□□□ 0.23
CD40-207ENST00000620709 C14orf80Q86SX3 495 aa16.48■□□□□ 0.23
CD40-207ENST00000620709 CTAGE6Q86UF2 777 aa16.48■□□□□ 0.23
CD40-207ENST00000620709 CREG2Q8IUH2 290 aa16.48■□□□□ 0.23
CD40-207ENST00000620709 CTAGE4Q8IX94 777 aa16.48■□□□□ 0.23
CD40-207ENST00000620709 ZCCHC14Q8WYQ9 949 aaKnown RBP16.48■□□□□ 0.23
CD40-207ENST00000620709 GATA6Q92908 595 aa16.48■□□□□ 0.23
CD40-207ENST00000620709 PTPRN2Q92932 1015 aa16.48■□□□□ 0.23
CD40-207ENST00000620709 SLC6A18Q96N87 628 aa16.48■□□□□ 0.23
CD40-207ENST00000620709 TRIM7Q9C029 511 aa16.48■□□□□ 0.23
CD40-207ENST00000620709 MUC3BQ9H195 1237 aa16.48■□□□□ 0.23
CD40-207ENST00000620709 WDCPQ9H6R7 721 aa16.48■□□□□ 0.23
CD40-207ENST00000620709 AASDHPPTQ9NRN7 309 aa16.48■□□□□ 0.23
CD40-207ENST00000620709 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP16.48■□□□□ 0.23
CD40-207ENST00000620709 VPS28Q9UK41 221 aa16.48■□□□□ 0.23
CD40-207ENST00000620709 APOBEC2Q9Y235 224 aaKnown RBP16.48■□□□□ 0.23
CD40-207ENST00000620709 MSRB2Q9Y3D2 182 aa16.48■□□□□ 0.23
CD40-207ENST00000620709 SNX10Q9Y5X0 201 aa16.48■□□□□ 0.23
CD40-207ENST00000620709 SPEGQ15772 3267 aa16.48■□□□□ 0.23
CD40-207ENST00000620709 CCDC66A2RUB6 948 aa16.47■□□□□ 0.23
CD40-207ENST00000620709 PLK4O00444 970 aa16.47■□□□□ 0.23
CD40-207ENST00000620709 CTIFO43310 598 aaKnown RBP16.47■□□□□ 0.23
CD40-207ENST00000620709 GJB6O95452 261 aa16.47■□□□□ 0.23
CD40-207ENST00000620709 ADH1BP00325 375 aa16.47■□□□□ 0.23
CD40-207ENST00000620709 ZNF883P0CG24 379 aa16.47■□□□□ 0.23
CD40-207ENST00000620709 GOT1P17174 413 aa16.47■□□□□ 0.23
CD40-207ENST00000620709 CTNNA2P26232 953 aa16.47■□□□□ 0.23
CD40-207ENST00000620709 PAFAH1B1P43034 410 aa16.47■□□□□ 0.23
CD40-207ENST00000620709 RPL7AP62424 266 aaKnown RBP16.47■□□□□ 0.23
CD40-207ENST00000620709 POM121L1PQ3SYA9 428 aa16.47■□□□□ 0.23
CD40-207ENST00000620709 KCNT1Q5JUK3 1230 aa16.47■□□□□ 0.23
CD40-207ENST00000620709 FAM102AQ5T9C2 384 aaPredicted RBP16.47■□□□□ 0.23
CD40-207ENST00000620709 SLC26A9Q7LBE3 791 aa16.47■□□□□ 0.23
CD40-207ENST00000620709 ZDHHC17Q8IUH5 632 aa16.47■□□□□ 0.23
CD40-207ENST00000620709 AADATQ8N5Z0 425 aa16.47■□□□□ 0.23
CD40-207ENST00000620709 OR2T34Q8NGX1 318 aa16.47■□□□□ 0.23
CD40-207ENST00000620709 FNIP1Q8TF40 1166 aa16.47■□□□□ 0.23
CD40-207ENST00000620709 ACE2Q9BYF1 805 aaPredicted RBP16.47■□□□□ 0.23
CD40-207ENST00000620709 TKTL2Q9H0I9 626 aa16.47■□□□□ 0.23
CD40-207ENST00000620709 METTL5Q9NRN9 209 aaKnown RBP16.47■□□□□ 0.23
CD40-207ENST00000620709 STAP1Q9ULZ2 295 aa16.47■□□□□ 0.23
CD40-207ENST00000620709 PLXNA2O75051 1894 aa16.47■□□□□ 0.23
CD40-207ENST00000620709 NYNRINQ9P2P1 1898 aaKnown RBP16.47■□□□□ 0.23
CD40-207ENST00000620709 WDFY3Q8IZQ1 3526 aa16.47■□□□□ 0.23
CD40-207ENST00000620709 TBC1D3DA0A087WVF3 549 aa16.46■□□□□ 0.23
CD40-207ENST00000620709 TBC1D3IA0A087WXS9 549 aa16.46■□□□□ 0.23
CD40-207ENST00000620709 TBC1D3EA0A087X179 549 aa16.46■□□□□ 0.23
CD40-207ENST00000620709 TBC1D3KA0A087X1G2 549 aa16.46■□□□□ 0.23
CD40-207ENST00000620709 TBC1D3FA6NER0 549 aaPredicted RBP16.46■□□□□ 0.23
CD40-207ENST00000620709 EFCAB8A8MWE9 144 aa16.46■□□□□ 0.23
CD40-207ENST00000620709 TBC1D3LB9A6J9 549 aa16.46■□□□□ 0.23
CD40-207ENST00000620709 H0Y8X5 98 aa16.46■□□□□ 0.23
CD40-207ENST00000620709 FLRT2O43155 660 aa16.46■□□□□ 0.23
CD40-207ENST00000620709 TBC1D3HP0C7X1 549 aa16.46■□□□□ 0.23
CD40-207ENST00000620709 C7P10643 843 aa16.46■□□□□ 0.23
CD40-207ENST00000620709 TFE3P19532 575 aaPredicted RBP16.46■□□□□ 0.23
CD40-207ENST00000620709 C5AR1P21730 350 aa16.46■□□□□ 0.23
CD40-207ENST00000620709 CTNNA1P35221 906 aaKnown RBP16.46■□□□□ 0.23
CD40-207ENST00000620709 DEUP1Q05D60 604 aa16.46■□□□□ 0.23
CD40-207ENST00000620709 PIGHQ14442 188 aaPredicted RBP16.46■□□□□ 0.23
CD40-207ENST00000620709 ELAVL3Q14576 367 aaKnown RBP16.46■□□□□ 0.23
CD40-207ENST00000620709 PRAMEF14Q5SWL7 426 aa16.46■□□□□ 0.23
CD40-207ENST00000620709 TBC1D3GQ6DHY5 549 aa16.46■□□□□ 0.23
CD40-207ENST00000620709 TBC1D3CQ6IPX1 549 aa16.46■□□□□ 0.23
CD40-207ENST00000620709 RAB44Q7Z6P3 723 aaPredicted RBP16.46■□□□□ 0.23
CD40-207ENST00000620709 SLCO6A1Q86UG4 719 aa16.46■□□□□ 0.23
CD40-207ENST00000620709 TBC1D3Q8IZP1 549 aaPredicted RBP16.46■□□□□ 0.23
CD40-207ENST00000620709 LRRN4CLQ8ND94 238 aa16.46■□□□□ 0.23
CD40-207ENST00000620709 OR52K2Q8NGK3 314 aa16.46■□□□□ 0.23
CD40-207ENST00000620709 OR8D1Q8WZ84 308 aa16.46■□□□□ 0.23
CD40-207ENST00000620709 FEM1AQ9BSK4 669 aa16.46■□□□□ 0.23
CD40-207ENST00000620709 TMEM121BQ9BXQ6 578 aaPredicted RBP16.46■□□□□ 0.23
CD40-207ENST00000620709 CARD9Q9H257 536 aa16.46■□□□□ 0.23
CD40-207ENST00000620709 PIGVQ9NUD9 493 aa16.46■□□□□ 0.23
CD40-207ENST00000620709 FZD4Q9ULV1 537 aa16.46■□□□□ 0.23
CD40-207ENST00000620709 BTBD3Q9Y2F9 522 aa16.46■□□□□ 0.23
CD40-207ENST00000620709 ZFHX4Q86UP3 3567 aa16.46■□□□□ 0.22
CD40-207ENST00000620709 A0A1W2PPC4 97 aa16.45■□□□□ 0.22
CD40-207ENST00000620709 CBFA2T3O75081 653 aa16.45■□□□□ 0.22
CD40-207ENST00000620709 CLDN11O75508 207 aa16.45■□□□□ 0.22
CD40-207ENST00000620709 CNTN5O94779 1100 aa16.45■□□□□ 0.22
CD40-207ENST00000620709 RHOCP08134 193 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms