RNA–Protein interactions for RNA: ENST00000620514.1

HMGN3-203, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

TSL 3 BASIC

Gene HMGN3, Length 1,010 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-203ENST00000620514 ETFBP38117 255 aa17.49■□□□□ 0.39
HMGN3-203ENST00000620514 GRK6P43250 576 aa17.49■□□□□ 0.39
HMGN3-203ENST00000620514 EFHC2Q5JST6 749 aa17.49■□□□□ 0.39
HMGN3-203ENST00000620514 DCUN1D2Q6PH85 259 aa17.49■□□□□ 0.39
HMGN3-203ENST00000620514 ZNF571Q7Z3V5 609 aaPredicted RBP17.49■□□□□ 0.39
HMGN3-203ENST00000620514 MFSD2AQ8NA29 543 aa17.49■□□□□ 0.39
HMGN3-203ENST00000620514 OR6K2Q8NGY2 324 aa17.49■□□□□ 0.39
HMGN3-203ENST00000620514 CDC6Q99741 560 aa17.49■□□□□ 0.39
HMGN3-203ENST00000620514 HEPHQ9BQS7 1158 aa17.49■□□□□ 0.39
HMGN3-203ENST00000620514 CNPY3Q9BT09 278 aa17.49■□□□□ 0.39
HMGN3-203ENST00000620514 HDAC8Q9BY41 377 aa17.49■□□□□ 0.39
HMGN3-203ENST00000620514 MAGEH1Q9H213 219 aa17.49■□□□□ 0.39
HMGN3-203ENST00000620514 HAUS4Q9H6D7 363 aa17.49■□□□□ 0.39
HMGN3-203ENST00000620514 RETREG1Q9H6L5 497 aa17.49■□□□□ 0.39
HMGN3-203ENST00000620514 NOL6Q9H6R4 1146 aaKnown RBP17.49■□□□□ 0.39
HMGN3-203ENST00000620514 FZD10Q9ULW2 581 aa17.49■□□□□ 0.39
HMGN3-203ENST00000620514 ZFR2Q9UPR6 939 aaKnown RBP17.49■□□□□ 0.39
HMGN3-203ENST00000620514 DMTF1Q9Y222 760 aa17.49■□□□□ 0.39
HMGN3-203ENST00000620514 AKAP13Q12802 2813 aa17.49■□□□□ 0.39
HMGN3-203ENST00000620514 CHD5Q8TDI0 1954 aa17.49■□□□□ 0.39
HMGN3-203ENST00000620514 A0A1W2PQC6 194 aa17.48■□□□□ 0.39
HMGN3-203ENST00000620514 SYCE3A1L190 88 aa17.48■□□□□ 0.39
HMGN3-203ENST00000620514 FAM221BA6H8Z2 402 aa17.48■□□□□ 0.39
HMGN3-203ENST00000620514 SLC31A1O15431 190 aa17.48■□□□□ 0.39
HMGN3-203ENST00000620514 CREB3O43889 395 aa17.48■□□□□ 0.39
HMGN3-203ENST00000620514 EPHB2P29323 1055 aa17.48■□□□□ 0.39
HMGN3-203ENST00000620514 NUDT1P36639 197 aa17.48■□□□□ 0.39
HMGN3-203ENST00000620514 MAMLD1Q13495 774 aa17.48■□□□□ 0.39
HMGN3-203ENST00000620514 POLD3Q15054 466 aaPredicted RBP17.48■□□□□ 0.39
HMGN3-203ENST00000620514 ZNF284Q2VY69 593 aa17.48■□□□□ 0.39
HMGN3-203ENST00000620514 SETMARQ53H47 684 aaPredicted RBP17.48■□□□□ 0.39
HMGN3-203ENST00000620514 SFMBT2Q5VUG0 894 aa17.48■□□□□ 0.39
HMGN3-203ENST00000620514 HORMAD1Q86X24 394 aa17.48■□□□□ 0.39
HMGN3-203ENST00000620514 RTL3Q8N8U3 475 aaKnown RBP17.48■□□□□ 0.39
HMGN3-203ENST00000620514 NETO2Q8NC67 525 aa17.48■□□□□ 0.39
HMGN3-203ENST00000620514 SAP25Q8TEE9 199 aa17.48■□□□□ 0.39
HMGN3-203ENST00000620514 TTYH3Q9C0H2 523 aa17.48■□□□□ 0.39
HMGN3-203ENST00000620514 KLC2Q9H0B6 622 aa17.48■□□□□ 0.39
HMGN3-203ENST00000620514 ZDHHC6Q9H6R6 413 aa17.48■□□□□ 0.39
HMGN3-203ENST00000620514 FZD3Q9NPG1 666 aa17.48■□□□□ 0.39
HMGN3-203ENST00000620514 GPATCH2LQ9NWQ4 482 aa17.48■□□□□ 0.39
HMGN3-203ENST00000620514 PRAMEF26H0Y7S4 382 aa17.47■□□□□ 0.39
HMGN3-203ENST00000620514 DDX3XO00571 662 aaKnown RBP eCLIP17.47■□□□□ 0.393e-8■■■□□ 15.7
HMGN3-203ENST00000620514 KDELR3O43731 214 aa17.47■□□□□ 0.39
HMGN3-203ENST00000620514 PCDH8O95206 1070 aa17.47■□□□□ 0.39
HMGN3-203ENST00000620514 SERPINC1P01008 464 aa17.47■□□□□ 0.39
HMGN3-203ENST00000620514 NEK3P51956 506 aa17.47■□□□□ 0.39
HMGN3-203ENST00000620514 CCDC15Q0P6D6 951 aa17.47■□□□□ 0.39
HMGN3-203ENST00000620514 BNIP3Q12983 259 aa17.47■□□□□ 0.39
HMGN3-203ENST00000620514 STAT4Q14765 748 aa17.47■□□□□ 0.39
HMGN3-203ENST00000620514 NR1I3Q14994 352 aa17.47■□□□□ 0.39
HMGN3-203ENST00000620514 SEL1L3Q68CR1 1132 aa17.47■□□□□ 0.39
HMGN3-203ENST00000620514 PLEKHA7Q6IQ23 1121 aa17.47■□□□□ 0.39
HMGN3-203ENST00000620514 PARS2Q7L3T8 475 aaKnown RBP17.47■□□□□ 0.39
HMGN3-203ENST00000620514 TMC6Q7Z403 805 aa17.47■□□□□ 0.39
HMGN3-203ENST00000620514 RYBPQ8N488 228 aaPredicted RBP17.47■□□□□ 0.39
HMGN3-203ENST00000620514 TMEM145Q8NBT3 493 aa17.47■□□□□ 0.39
HMGN3-203ENST00000620514 VOPP1Q96AW1 172 aa17.47■□□□□ 0.39
HMGN3-203ENST00000620514 ISG20Q96AZ6 181 aaKnown RBP17.47■□□□□ 0.39
HMGN3-203ENST00000620514 PPP1R16AQ96I34 528 aa17.47■□□□□ 0.39
HMGN3-203ENST00000620514 VCPIP1Q96JH7 1222 aa17.47■□□□□ 0.39
HMGN3-203ENST00000620514 CBX8Q9HC52 389 aa17.47■□□□□ 0.39
HMGN3-203ENST00000620514 AIPL1Q9NZN9 384 aa17.47■□□□□ 0.39
HMGN3-203ENST00000620514 ZMIZ1Q9ULJ6 1067 aa17.47■□□□□ 0.39
HMGN3-203ENST00000620514 HPCAL4Q9UM19 191 aa17.47■□□□□ 0.39
HMGN3-203ENST00000620514 IGF2RP11717 2491 aa17.47■□□□□ 0.39
HMGN3-203ENST00000620514 TNFSF14O43557 240 aa17.46■□□□□ 0.39
HMGN3-203ENST00000620514 DKK1O94907 266 aa17.46■□□□□ 0.39
HMGN3-203ENST00000620514 ITGAVP06756 1048 aa17.46■□□□□ 0.39
HMGN3-203ENST00000620514 SKILP12757 684 aa17.46■□□□□ 0.39
HMGN3-203ENST00000620514 ADRB3P13945 408 aa17.46■□□□□ 0.39
HMGN3-203ENST00000620514 PSMA2P25787 234 aa17.46■□□□□ 0.39
HMGN3-203ENST00000620514 ITGB7P26010 798 aa17.46■□□□□ 0.39
HMGN3-203ENST00000620514 EPHA8P29322 1005 aaPredicted RBP17.46■□□□□ 0.39
HMGN3-203ENST00000620514 PRKCIP41743 596 aa17.46■□□□□ 0.39
HMGN3-203ENST00000620514 CCDC157Q569K6 752 aa17.46■□□□□ 0.39
HMGN3-203ENST00000620514 ATXN7L2Q5T6C5 722 aaPredicted RBP17.46■□□□□ 0.39
HMGN3-203ENST00000620514 NEK5Q6P3R8 708 aa17.46■□□□□ 0.39
HMGN3-203ENST00000620514 LUZP1Q86V48 1076 aa17.46■□□□□ 0.39
HMGN3-203ENST00000620514 IQCHQ86VS3 1027 aa17.46■□□□□ 0.39
HMGN3-203ENST00000620514 ZNF354CQ86Y25 554 aa17.46■□□□□ 0.39
HMGN3-203ENST00000620514 ARFGAP1Q8N6T3 406 aa17.46■□□□□ 0.39
HMGN3-203ENST00000620514 KDF1Q8NAX2 398 aaPredicted RBP17.46■□□□□ 0.39
HMGN3-203ENST00000620514 HMCESQ96FZ2 354 aa17.46■□□□□ 0.39
HMGN3-203ENST00000620514 EPAS1Q99814 870 aa17.46■□□□□ 0.39
HMGN3-203ENST00000620514 TRIM7Q9C029 511 aa17.46■□□□□ 0.39
HMGN3-203ENST00000620514 ERVMER34-1Q9H9K5 563 aa17.46■□□□□ 0.39
HMGN3-203ENST00000620514 PARVAQ9NVD7 372 aa17.46■□□□□ 0.39
HMGN3-203ENST00000620514 CXorf51AA0A1B0GTR3 108 aa17.45■□□□□ 0.38
HMGN3-203ENST00000620514 WASH4PA8MWX3 477 aa17.45■□□□□ 0.38
HMGN3-203ENST00000620514 RASA4BC9J798 803 aa17.45■□□□□ 0.38
HMGN3-203ENST00000620514 RASA4O43374 803 aa17.45■□□□□ 0.38
HMGN3-203ENST00000620514 BUB1O43683 1085 aa17.45■□□□□ 0.38
HMGN3-203ENST00000620514 TMCC1O94876 653 aa17.45■□□□□ 0.38
HMGN3-203ENST00000620514 GSRP00390 522 aa17.45■□□□□ 0.38
HMGN3-203ENST00000620514 FTLP02792 175 aaPredicted RBP17.45■□□□□ 0.38
HMGN3-203ENST00000620514 ABL2P42684 1182 aa17.45■□□□□ 0.38
HMGN3-203ENST00000620514 RXRGP48443 463 aa17.45■□□□□ 0.38
HMGN3-203ENST00000620514 ARRB1P49407 418 aaPredicted RBP17.45■□□□□ 0.38
HMGN3-203ENST00000620514 GEMIN4P57678 1058 aaKnown RBP17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms