RNA–Protein interactions for RNA: ENST00000617904.4

TRAPPC3-210, Transcript of trafficking protein particle complex 3, humanhuman

TSL 2 BASIC

Gene TRAPPC3, Length 1,305 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-210ENST00000617904 CDKL2Q92772 493 aa17.07■□□□□ 0.32
TRAPPC3-210ENST00000617904 STAMBPL1Q96FJ0 436 aa17.07■□□□□ 0.32
TRAPPC3-210ENST00000617904 LRRC3Q9BY71 257 aa17.07■□□□□ 0.32
TRAPPC3-210ENST00000617904 MUC3BQ9H195 1237 aa17.07■□□□□ 0.32
TRAPPC3-210ENST00000617904 IRF2BPLQ9H1B7 796 aa17.07■□□□□ 0.32
TRAPPC3-210ENST00000617904 KIF9Q9HAQ2 790 aa17.07■□□□□ 0.32
TRAPPC3-210ENST00000617904 CFAP97Q9P2B7 532 aa17.07■□□□□ 0.32
TRAPPC3-210ENST00000617904 CHMP2BQ9UQN3 213 aa17.07■□□□□ 0.32
TRAPPC3-210ENST00000617904 TCRBV7S3A2A0A539 114 aa17.06■□□□□ 0.32
TRAPPC3-210ENST00000617904 H0Y858 1186 aa17.06■□□□□ 0.32
TRAPPC3-210ENST00000617904 H3BQF6 201 aa17.06■□□□□ 0.32
TRAPPC3-210ENST00000617904 POLBP06746 335 aa17.06■□□□□ 0.32
TRAPPC3-210ENST00000617904 SLC6A4P31645 630 aa17.06■□□□□ 0.32
TRAPPC3-210ENST00000617904 GBP2P32456 591 aaPredicted RBP17.06■□□□□ 0.32
TRAPPC3-210ENST00000617904 NRLP54845 237 aa17.06■□□□□ 0.32
TRAPPC3-210ENST00000617904 CBX1P83916 185 aa17.06■□□□□ 0.32
TRAPPC3-210ENST00000617904 LBRQ14739 615 aaKnown RBP17.06■□□□□ 0.32
TRAPPC3-210ENST00000617904 RASA2Q15283 850 aa17.06■□□□□ 0.32
TRAPPC3-210ENST00000617904 OTOP3Q7RTS5 596 aa17.06■□□□□ 0.32
TRAPPC3-210ENST00000617904 CMTM8Q8IZV2 173 aa17.06■□□□□ 0.32
TRAPPC3-210ENST00000617904 KIAA1958Q8N8K9 716 aa17.06■□□□□ 0.32
TRAPPC3-210ENST00000617904 UHMK1Q8TAS1 419 aaKnown RBP17.06■□□□□ 0.32
TRAPPC3-210ENST00000617904 USP33Q8TEY7 942 aa17.06■□□□□ 0.32
TRAPPC3-210ENST00000617904 LRRN4Q8WUT4 740 aa17.06■□□□□ 0.32
TRAPPC3-210ENST00000617904 ATOH1Q92858 354 aaPredicted RBP17.06■□□□□ 0.32
TRAPPC3-210ENST00000617904 ARHGEF2Q92974 986 aaKnown RBP17.06■□□□□ 0.32
TRAPPC3-210ENST00000617904 CYP2S1Q96SQ9 504 aa17.06■□□□□ 0.32
TRAPPC3-210ENST00000617904 EBNA1BP2Q99848 306 aaKnown RBP17.06■□□□□ 0.32
TRAPPC3-210ENST00000617904 SPON2Q9BUD6 331 aa17.06■□□□□ 0.32
TRAPPC3-210ENST00000617904 CEP41Q9BYV8 373 aa17.06■□□□□ 0.32
TRAPPC3-210ENST00000617904 POLR1EQ9GZS1 481 aaKnown RBP17.06■□□□□ 0.32
TRAPPC3-210ENST00000617904 SLC25A51Q9H1U9 297 aa17.06■□□□□ 0.32
TRAPPC3-210ENST00000617904 LRRC4CQ9HCJ2 640 aa17.06■□□□□ 0.32
TRAPPC3-210ENST00000617904 ATP13A1Q9HD20 1204 aa17.06■□□□□ 0.32
TRAPPC3-210ENST00000617904 SENP1Q9P0U3 644 aa17.06■□□□□ 0.32
TRAPPC3-210ENST00000617904 UBA2Q9UBT2 640 aaPredicted RBP17.06■□□□□ 0.32
TRAPPC3-210ENST00000617904 SEPT3Q9UH03 358 aa17.06■□□□□ 0.32
TRAPPC3-210ENST00000617904 MRPS23Q9Y3D9 190 aaKnown RBP17.06■□□□□ 0.32
TRAPPC3-210ENST00000617904 TEX264Q9Y6I9 313 aa17.06■□□□□ 0.32
TRAPPC3-210ENST00000617904 CCDC195A0A1B0GUA6 201 aa17.05■□□□□ 0.32
TRAPPC3-210ENST00000617904 SMIM23A6NLE4 172 aa17.05■□□□□ 0.32
TRAPPC3-210ENST00000617904 KDELR3O43731 214 aa17.05■□□□□ 0.32
TRAPPC3-210ENST00000617904 TSPAN3O60637 253 aa17.05■□□□□ 0.32
TRAPPC3-210ENST00000617904 PRAMEF11O60813 436 aa17.05■□□□□ 0.32
TRAPPC3-210ENST00000617904 TBL1XO60907 577 aa17.05■□□□□ 0.32
TRAPPC3-210ENST00000617904 KLKB1P03952 638 aa17.05■□□□□ 0.32
TRAPPC3-210ENST00000617904 PGAM1P18669 254 aa17.05■□□□□ 0.32
TRAPPC3-210ENST00000617904 CA4P22748 312 aa17.05■□□□□ 0.32
TRAPPC3-210ENST00000617904 MSH2P43246 934 aa17.05■□□□□ 0.32
TRAPPC3-210ENST00000617904 TNK2Q07912 1038 aa17.05■□□□□ 0.32
TRAPPC3-210ENST00000617904 ZBTB17Q13105 803 aa17.05■□□□□ 0.32
TRAPPC3-210ENST00000617904 SLC12A1Q13621 1099 aa17.05■□□□□ 0.32
TRAPPC3-210ENST00000617904 ASTLQ6HA08 431 aaPredicted RBP17.05■□□□□ 0.32
TRAPPC3-210ENST00000617904 Q6ZNB5 142 aa17.05■□□□□ 0.32
TRAPPC3-210ENST00000617904 TDRPQ86YL5 185 aa17.05■□□□□ 0.32
TRAPPC3-210ENST00000617904 CFAP52Q8N1V2 620 aa17.05■□□□□ 0.32
TRAPPC3-210ENST00000617904 CARNMT1Q8N4J0 409 aa17.05■□□□□ 0.32
TRAPPC3-210ENST00000617904 NETO2Q8NC67 525 aa17.05■□□□□ 0.32
TRAPPC3-210ENST00000617904 TTC16Q8NEE8 873 aa17.05■□□□□ 0.32
TRAPPC3-210ENST00000617904 DDI1Q8WTU0 396 aa17.05■□□□□ 0.32
TRAPPC3-210ENST00000617904 OTUB2Q96DC9 234 aa17.05■□□□□ 0.32
TRAPPC3-210ENST00000617904 PWWP2AQ96N64 755 aa17.05■□□□□ 0.32
TRAPPC3-210ENST00000617904 CINPQ9BW66 212 aaPredicted RBP17.05■□□□□ 0.32
TRAPPC3-210ENST00000617904 IL22Q9GZX6 179 aa17.05■□□□□ 0.32
TRAPPC3-210ENST00000617904 CNOT10Q9H9A5 744 aaKnown RBP17.05■□□□□ 0.32
TRAPPC3-210ENST00000617904 TDP1Q9NUW8 608 aa17.05■□□□□ 0.32
TRAPPC3-210ENST00000617904 TBC1D30Q9Y2I9 924 aa17.05■□□□□ 0.32
TRAPPC3-210ENST00000617904 LEFTY2O00292 366 aa17.04■□□□□ 0.32
TRAPPC3-210ENST00000617904 CACNG3O60359 315 aa17.04■□□□□ 0.32
TRAPPC3-210ENST00000617904 LUC7L3O95232 432 aaKnown RBP17.04■□□□□ 0.32
TRAPPC3-210ENST00000617904 INHBAP08476 426 aa17.04■□□□□ 0.32
TRAPPC3-210ENST00000617904 NAB1Q13506 487 aa17.04■□□□□ 0.32
TRAPPC3-210ENST00000617904 SKIDA1Q1XH10 827 aa17.04■□□□□ 0.32
TRAPPC3-210ENST00000617904 RETSATQ6NUM9 610 aa17.04■□□□□ 0.32
TRAPPC3-210ENST00000617904 CAND1Q86VP6 1230 aaKnown RBP17.04■□□□□ 0.32
TRAPPC3-210ENST00000617904 TP53INP2Q8IXH6 220 aa17.04■□□□□ 0.32
TRAPPC3-210ENST00000617904 FAM217AQ8IXS0 508 aa17.04■□□□□ 0.32
TRAPPC3-210ENST00000617904 GSDMBQ8TAX9 411 aa17.04■□□□□ 0.32
TRAPPC3-210ENST00000617904 SHKBP1Q8TBC3 707 aa17.04■□□□□ 0.32
TRAPPC3-210ENST00000617904 SMG7Q92540 1137 aaKnown RBP17.04■□□□□ 0.32
TRAPPC3-210ENST00000617904 CFAP36Q96G28 342 aa17.04■□□□□ 0.32
TRAPPC3-210ENST00000617904 ZFRQ96KR1 1074 aaKnown RBP17.04■□□□□ 0.32
TRAPPC3-210ENST00000617904 C2orf49Q9BVC5 232 aaPredicted RBP17.04■□□□□ 0.32
TRAPPC3-210ENST00000617904 EPB41L4BQ9H329 900 aa17.04■□□□□ 0.32
TRAPPC3-210ENST00000617904 ACSS3Q9H6R3 686 aa17.04■□□□□ 0.32
TRAPPC3-210ENST00000617904 NT5MQ9NPB1 228 aa17.04■□□□□ 0.32
TRAPPC3-210ENST00000617904 NDFIP2Q9NV92 336 aa17.04■□□□□ 0.32
TRAPPC3-210ENST00000617904 PSMC3IPQ9P2W1 217 aaPredicted RBP17.04■□□□□ 0.32
TRAPPC3-210ENST00000617904 DNMT3BQ9UBC3 853 aaKnown RBP17.04■□□□□ 0.32
TRAPPC3-210ENST00000617904 NOVA2Q9UNW9 492 aaKnown RBP17.04■□□□□ 0.32
TRAPPC3-210ENST00000617904 POC1B-GALNT4F8VUJ3 575 aa17.03■□□□□ 0.32
TRAPPC3-210ENST00000617904 GFRA3O60609 400 aa17.03■□□□□ 0.32
TRAPPC3-210ENST00000617904 RFPL2O75678 378 aa17.03■□□□□ 0.32
TRAPPC3-210ENST00000617904 PAPLNO95428 1278 aa17.03■□□□□ 0.32
TRAPPC3-210ENST00000617904 SHBGP04278 402 aa17.03■□□□□ 0.32
TRAPPC3-210ENST00000617904 TCF3P15923 654 aa17.03■□□□□ 0.32
TRAPPC3-210ENST00000617904 NR1D1P20393 614 aa17.03■□□□□ 0.32
TRAPPC3-210ENST00000617904 MAGEA3P43357 314 aa17.03■□□□□ 0.32
TRAPPC3-210ENST00000617904 CLCN5P51795 746 aa17.03■□□□□ 0.32
TRAPPC3-210ENST00000617904 SESN2P58004 480 aaPredicted RBP17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms