RNA–Protein interactions for RNA: ENST00000617422.4

CNTNAP3B-212, Transcript of contactin associated protein like 3B, humanhuman

TSL 2 BASIC

Gene CNTNAP3B, Length 2,170 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3B-212ENST00000617422 CDH4P55283 916 aa20.95■□□□□ 0.94
CNTNAP3B-212ENST00000617422 IL10RBQ08334 325 aa20.95■□□□□ 0.94
CNTNAP3B-212ENST00000617422 C9orf50Q5SZB4 431 aa20.95■□□□□ 0.94
CNTNAP3B-212ENST00000617422 MARC1Q5VT66 337 aa20.95■□□□□ 0.94
CNTNAP3B-212ENST00000617422 TRPM8Q7Z2W7 1104 aa20.95■□□□□ 0.94
CNTNAP3B-212ENST00000617422 KDELC2Q7Z4H8 507 aa20.95■□□□□ 0.94
CNTNAP3B-212ENST00000617422 SLC26A11Q86WA9 606 aa20.95■□□□□ 0.94
CNTNAP3B-212ENST00000617422 SERAC1Q96JX3 654 aa20.95■□□□□ 0.94
CNTNAP3B-212ENST00000617422 ZNF778Q96MU6 729 aa20.95■□□□□ 0.94
CNTNAP3B-212ENST00000617422 ELAC2Q9BQ52 826 aaKnown RBP20.95■□□□□ 0.94
CNTNAP3B-212ENST00000617422 TBL1YQ9BQ87 522 aa20.95■□□□□ 0.94
CNTNAP3B-212ENST00000617422 FICDQ9BVA6 458 aa20.95■□□□□ 0.94
CNTNAP3B-212ENST00000617422 ATXN3LQ9H3M9 355 aa20.95■□□□□ 0.94
CNTNAP3B-212ENST00000617422 CHRAC1Q9NRG0 131 aa20.95■□□□□ 0.94
CNTNAP3B-212ENST00000617422 AAR2Q9Y312 384 aaKnown RBP20.95■□□□□ 0.94
CNTNAP3B-212ENST00000617422 RPS6KL1Q9Y6S9 549 aa20.95■□□□□ 0.94
CNTNAP3B-212ENST00000617422 REV3LO60673 3130 aa20.94■□□□□ 0.94
CNTNAP3B-212ENST00000617422 GBF1Q92538 1859 aa20.94■□□□□ 0.94
CNTNAP3B-212ENST00000617422 GOLGA8RI6L899 631 aa20.94■□□□□ 0.94
CNTNAP3B-212ENST00000617422 PRAMEF11O60813 436 aa20.94■□□□□ 0.94
CNTNAP3B-212ENST00000617422 RFPL2O75678 378 aa20.94■□□□□ 0.94
CNTNAP3B-212ENST00000617422 GLUD1P00367 558 aa20.94■□□□□ 0.94
CNTNAP3B-212ENST00000617422 INHBAP08476 426 aa20.94■□□□□ 0.94
CNTNAP3B-212ENST00000617422 KRT4P19013 534 aa20.94■□□□□ 0.94
CNTNAP3B-212ENST00000617422 CHRNA4P43681 627 aa20.94■□□□□ 0.94
CNTNAP3B-212ENST00000617422 DSC2Q02487 901 aa20.94■□□□□ 0.94
CNTNAP3B-212ENST00000617422 GNA12Q03113 381 aa20.94■□□□□ 0.94
CNTNAP3B-212ENST00000617422 PABPC1LQ4VXU2 614 aaKnown RBP20.94■□□□□ 0.94
CNTNAP3B-212ENST00000617422 NAPEPLDQ6IQ20 393 aa20.94■□□□□ 0.94
CNTNAP3B-212ENST00000617422 KDELC1Q6UW63 502 aa20.94■□□□□ 0.94
CNTNAP3B-212ENST00000617422 TMEM135Q86UB9 458 aa20.94■□□□□ 0.94
CNTNAP3B-212ENST00000617422 MFSD3Q96ES6 412 aa20.94■□□□□ 0.94
CNTNAP3B-212ENST00000617422 IMP4Q96G21 291 aaKnown RBP20.94■□□□□ 0.94
CNTNAP3B-212ENST00000617422 CORO1BQ9BR76 489 aa20.94■□□□□ 0.94
CNTNAP3B-212ENST00000617422 TLR9Q9NR96 1032 aa20.94■□□□□ 0.94
CNTNAP3B-212ENST00000617422 BFARQ9NZS9 450 aa20.94■□□□□ 0.94
CNTNAP3B-212ENST00000617422 ZCWPW2A0A1B0GU75 182 aa20.93■□□□□ 0.94
CNTNAP3B-212ENST00000617422 TYROBPO43914 113 aa20.93■□□□□ 0.94
CNTNAP3B-212ENST00000617422 ANXA9O76027 345 aa20.93■□□□□ 0.94
CNTNAP3B-212ENST00000617422 WDR4P57081 412 aaKnown RBP20.93■□□□□ 0.94
CNTNAP3B-212ENST00000617422 RABGAP1LQ5R372 815 aa20.93■□□□□ 0.94
CNTNAP3B-212ENST00000617422 Q6ZNB5 142 aa20.93■□□□□ 0.94
CNTNAP3B-212ENST00000617422 CCDC149Q6ZUS6 474 aa20.93■□□□□ 0.94
CNTNAP3B-212ENST00000617422 SH2D5Q6ZV89 423 aa20.93■□□□□ 0.94
CNTNAP3B-212ENST00000617422 CYS1Q717R9 158 aa20.93■□□□□ 0.94
CNTNAP3B-212ENST00000617422 TTC16Q8NEE8 873 aa20.93■□□□□ 0.94
CNTNAP3B-212ENST00000617422 EMILIN2Q9BXX0 1053 aa20.93■□□□□ 0.94
CNTNAP3B-212ENST00000617422 SLC25A51Q9H1U9 297 aa20.93■□□□□ 0.94
CNTNAP3B-212ENST00000617422 PSAT1Q9Y617 370 aa20.93■□□□□ 0.94
CNTNAP3B-212ENST00000617422 GFRA2O00451 464 aa20.93■□□□□ 0.94
CNTNAP3B-212ENST00000617422 ELF3P78545 371 aaPredicted RBP20.93■□□□□ 0.94
CNTNAP3B-212ENST00000617422 CDH17Q12864 832 aa20.93■□□□□ 0.94
CNTNAP3B-212ENST00000617422 MIA3Q5JRA6 1907 aa20.93■□□□□ 0.94
CNTNAP3B-212ENST00000617422 CXorf57Q6NSI4 855 aaKnown RBP20.93■□□□□ 0.94
CNTNAP3B-212ENST00000617422 CCDC63Q8NA47 563 aa20.93■□□□□ 0.94
CNTNAP3B-212ENST00000617422 ARRDC2Q8TBH0 407 aa20.93■□□□□ 0.94
CNTNAP3B-212ENST00000617422 DENND1AQ8TEH3 1009 aa20.93■□□□□ 0.94
CNTNAP3B-212ENST00000617422 DYDC1Q8WWB3 177 aa20.93■□□□□ 0.94
CNTNAP3B-212ENST00000617422 NOTCH4Q99466 2003 aa20.92■□□□□ 0.94
CNTNAP3B-212ENST00000617422 CCDC78A2IDD5 438 aa20.92■□□□□ 0.94
CNTNAP3B-212ENST00000617422 SNX3O60493 162 aa20.92■□□□□ 0.94
CNTNAP3B-212ENST00000617422 CLDN11O75508 207 aa20.92■□□□□ 0.94
CNTNAP3B-212ENST00000617422 F7P08709 466 aaPredicted RBP20.92■□□□□ 0.94
CNTNAP3B-212ENST00000617422 ERVK-10P10266 1014 aa20.92■□□□□ 0.94
CNTNAP3B-212ENST00000617422 MYL4P12829 197 aa20.92■□□□□ 0.94
CNTNAP3B-212ENST00000617422 RPA3P35244 121 aaPredicted RBP20.92■□□□□ 0.94
CNTNAP3B-212ENST00000617422 CD86P42081 329 aa20.92■□□□□ 0.94
CNTNAP3B-212ENST00000617422 TNK2Q07912 1038 aa20.92■□□□□ 0.94
CNTNAP3B-212ENST00000617422 BMPR2Q13873 1038 aa20.92■□□□□ 0.94
CNTNAP3B-212ENST00000617422 RANBP10Q6VN20 620 aa20.92■□□□□ 0.94
CNTNAP3B-212ENST00000617422 CCNJLQ8IV13 435 aa20.92■□□□□ 0.94
CNTNAP3B-212ENST00000617422 TTC17Q96AE7 1141 aa20.92■□□□□ 0.94
CNTNAP3B-212ENST00000617422 PLCD4Q9BRC7 762 aa20.92■□□□□ 0.94
CNTNAP3B-212ENST00000617422 NAT9Q9BTE0 207 aa20.92■□□□□ 0.94
CNTNAP3B-212ENST00000617422 SMG9Q9H0W8 520 aaKnown RBP20.92■□□□□ 0.94
CNTNAP3B-212ENST00000617422 C12orf65Q9H3J6 166 aaKnown RBP20.92■□□□□ 0.94
CNTNAP3B-212ENST00000617422 ZNF180Q9UJW8 692 aa20.92■□□□□ 0.94
CNTNAP3B-212ENST00000617422 IKBKGQ9Y6K9 419 aa20.92■□□□□ 0.94
CNTNAP3B-212ENST00000617422 CEP290O15078 2479 aa20.92■□□□□ 0.94
CNTNAP3B-212ENST00000617422 FAM47DPA6NHR8 397 aa20.92■□□□□ 0.94
CNTNAP3B-212ENST00000617422 POLBP06746 335 aa20.92■□□□□ 0.94
CNTNAP3B-212ENST00000617422 EZRP15311 586 aaKnown RBP20.92■□□□□ 0.94
CNTNAP3B-212ENST00000617422 NPY2RP49146 381 aa20.92■□□□□ 0.94
CNTNAP3B-212ENST00000617422 GEMP55040 296 aa20.92■□□□□ 0.94
CNTNAP3B-212ENST00000617422 WNT3AP56704 352 aa20.92■□□□□ 0.94
CNTNAP3B-212ENST00000617422 LBRQ14739 615 aaKnown RBP20.92■□□□□ 0.94
CNTNAP3B-212ENST00000617422 PCSK7Q16549 785 aa20.92■□□□□ 0.94
CNTNAP3B-212ENST00000617422 FSCBQ5H9T9 825 aa20.92■□□□□ 0.94
CNTNAP3B-212ENST00000617422 GBP7Q8N8V2 638 aaPredicted RBP20.92■□□□□ 0.94
CNTNAP3B-212ENST00000617422 ATP2A3Q93084 1043 aa20.92■□□□□ 0.94
CNTNAP3B-212ENST00000617422 ZNF669Q96BR6 464 aaPredicted RBP20.92■□□□□ 0.94
CNTNAP3B-212ENST00000617422 TCEAL4Q96EI5 215 aa20.92■□□□□ 0.94
CNTNAP3B-212ENST00000617422 SMC6Q96SB8 1091 aa20.92■□□□□ 0.94
CNTNAP3B-212ENST00000617422 SLC46A2Q9BY10 475 aa20.92■□□□□ 0.94
CNTNAP3B-212ENST00000617422 MAGEH1Q9H213 219 aa20.92■□□□□ 0.94
CNTNAP3B-212ENST00000617422 A0A1B0GVM2 712 aa20.91■□□□□ 0.94
CNTNAP3B-212ENST00000617422 TCAF2A6NFQ2 919 aa20.91■□□□□ 0.94
CNTNAP3B-212ENST00000617422 PRPF4O43172 522 aaKnown RBP eCLIP20.91■□□□□ 0.94
CNTNAP3B-212ENST00000617422 PSMD3O43242 534 aa20.91■□□□□ 0.94
CNTNAP3B-212ENST00000617422 NEBLO76041 1014 aa20.91■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms