RNA–Protein interactions for RNA: ENST00000617054.1

NEK3-207, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 3,256 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-207ENST00000617054 IFT88Q13099 833 aa7.91□□□□□ -1.14
NEK3-207ENST00000617054 PRPSAP1Q14558 356 aa7.91□□□□□ -1.14
NEK3-207ENST00000617054 DLG2Q15700 870 aa7.91□□□□□ -1.14
NEK3-207ENST00000617054 ANKRD20A4Q4UJ75 823 aa7.91□□□□□ -1.14
NEK3-207ENST00000617054 ESRP1Q6NXG1 681 aaKnown RBP7.91□□□□□ -1.14
NEK3-207ENST00000617054 C16orf46Q6P387 395 aa7.91□□□□□ -1.14
NEK3-207ENST00000617054 CMC1Q7Z7K0 106 aa7.91□□□□□ -1.14
NEK3-207ENST00000617054 RASSF3Q86WH2 238 aa7.91□□□□□ -1.14
NEK3-207ENST00000617054 RIBC1Q8N443 379 aaPredicted RBP7.91□□□□□ -1.14
NEK3-207ENST00000617054 WFDC5Q8TCV5 224 aa7.91□□□□□ -1.14
NEK3-207ENST00000617054 DENND1AQ8TEH3 1009 aa7.91□□□□□ -1.14
NEK3-207ENST00000617054 TTC17Q96AE7 1141 aa7.91□□□□□ -1.14
NEK3-207ENST00000617054 LRRC39Q96DD0 335 aa7.91□□□□□ -1.14
NEK3-207ENST00000617054 TCEAL4Q96EI5 215 aa7.91□□□□□ -1.14
NEK3-207ENST00000617054 TBL1YQ9BQ87 522 aa7.91□□□□□ -1.14
NEK3-207ENST00000617054 FRMD8Q9BZ67 464 aaPredicted RBP7.91□□□□□ -1.14
NEK3-207ENST00000617054 UNKQ9C0B0 810 aaKnown RBP7.91□□□□□ -1.14
NEK3-207ENST00000617054 PHACTR1Q9C0D0 580 aa7.91□□□□□ -1.14
NEK3-207ENST00000617054 IL21Q9HBE4 155 aa7.91□□□□□ -1.14
NEK3-207ENST00000617054 EIF2B3Q9NR50 452 aaKnown RBP7.91□□□□□ -1.14
NEK3-207ENST00000617054 C20orf96Q9NUD7 363 aaPredicted RBP7.91□□□□□ -1.14
NEK3-207ENST00000617054 ZFATQ9P243 1243 aa7.91□□□□□ -1.14
NEK3-207ENST00000617054 CLEC4EQ9ULY5 219 aa7.91□□□□□ -1.14
NEK3-207ENST00000617054 CCL26Q9Y258 94 aa7.91□□□□□ -1.14
NEK3-207ENST00000617054 LTBP2Q14767 1821 aa7.91□□□□□ -1.14
NEK3-207ENST00000617054 ANAPC1Q9H1A4 1944 aa7.91□□□□□ -1.14
NEK3-207ENST00000617054 IQANK1A0A1B0GTG1 560 aa7.91□□□□□ -1.14
NEK3-207ENST00000617054 MTSS1O43312 755 aa7.91□□□□□ -1.14
NEK3-207ENST00000617054 SNAP91O60641 907 aa7.91□□□□□ -1.14
NEK3-207ENST00000617054 RFPL1O75677 317 aa7.91□□□□□ -1.14
NEK3-207ENST00000617054 VAPBO95292 243 aa7.91□□□□□ -1.14
NEK3-207ENST00000617054 CKMP06732 381 aa7.91□□□□□ -1.14
NEK3-207ENST00000617054 CTSAP10619 480 aa7.91□□□□□ -1.14
NEK3-207ENST00000617054 MLNP12872 115 aa7.91□□□□□ -1.14
NEK3-207ENST00000617054 GBP2P32456 591 aaPredicted RBP7.91□□□□□ -1.14
NEK3-207ENST00000617054 RGRP47804 291 aa7.91□□□□□ -1.14
NEK3-207ENST00000617054 ZNF135P52742 658 aaPredicted RBP7.91□□□□□ -1.14
NEK3-207ENST00000617054 WNT3AP56704 352 aa7.91□□□□□ -1.14
NEK3-207ENST00000617054 RING1Q06587 406 aa7.91□□□□□ -1.14
NEK3-207ENST00000617054 CTBP1Q13363 440 aa7.91□□□□□ -1.14
NEK3-207ENST00000617054 SERINC3Q13530 473 aa7.91□□□□□ -1.14
NEK3-207ENST00000617054 TTC39BQ5VTQ0 682 aaPredicted RBP7.91□□□□□ -1.14
NEK3-207ENST00000617054 HERC6Q8IVU3 1022 aa7.91□□□□□ -1.14
NEK3-207ENST00000617054 TCEAL8Q8IYN2 117 aa7.91□□□□□ -1.14
NEK3-207ENST00000617054 CARNMT1Q8N4J0 409 aa7.91□□□□□ -1.14
NEK3-207ENST00000617054 BANPQ8N9N5 519 aa7.91□□□□□ -1.14
NEK3-207ENST00000617054 POF1BQ8WVV4 589 aa7.91□□□□□ -1.14
NEK3-207ENST00000617054 PTPRN2Q92932 1015 aa7.91□□□□□ -1.14
NEK3-207ENST00000617054 CERS2Q96G23 380 aa7.91□□□□□ -1.14
NEK3-207ENST00000617054 SEC16BQ96JE7 1060 aa7.91□□□□□ -1.14
NEK3-207ENST00000617054 ZFRQ96KR1 1074 aaKnown RBP7.91□□□□□ -1.14
NEK3-207ENST00000617054 MYRFLQ96LU7 910 aa7.91□□□□□ -1.14
NEK3-207ENST00000617054 VAT1Q99536 393 aa7.91□□□□□ -1.14
NEK3-207ENST00000617054 KLF16Q9BXK1 252 aaPredicted RBP7.91□□□□□ -1.14
NEK3-207ENST00000617054 IARS2Q9NSE4 1012 aaKnown RBP7.91□□□□□ -1.14
NEK3-207ENST00000617054 ZNF358Q9NW07 568 aa7.91□□□□□ -1.14
NEK3-207ENST00000617054 PPARGC1AQ9UBK2 798 aaKnown RBP7.91□□□□□ -1.14
NEK3-207ENST00000617054 INSL6Q9Y581 213 aa7.91□□□□□ -1.14
NEK3-207ENST00000617054 KCTD3Q9Y597 815 aa7.91□□□□□ -1.14
NEK3-207ENST00000617054 HCFC2Q9Y5Z7 792 aa7.91□□□□□ -1.14
NEK3-207ENST00000617054 SLC4A7Q9Y6M7 1214 aa7.91□□□□□ -1.14
NEK3-207ENST00000617054 PLXNA4Q9HCM2 1894 aa7.91□□□□□ -1.14
NEK3-207ENST00000617054 DNAJC6O75061 913 aa7.91□□□□□ -1.14
NEK3-207ENST00000617054 SUN1O94901 812 aa7.91□□□□□ -1.14
NEK3-207ENST00000617054 SLC4A1P02730 911 aa7.91□□□□□ -1.14
NEK3-207ENST00000617054 MMP2P08253 660 aa7.91□□□□□ -1.14
NEK3-207ENST00000617054 MZF1P28698 734 aaPredicted RBP7.91□□□□□ -1.14
NEK3-207ENST00000617054 NDST2P52849 883 aa7.91□□□□□ -1.14
NEK3-207ENST00000617054 NTHL1P78549 312 aa7.91□□□□□ -1.14
NEK3-207ENST00000617054 TMPRSS15P98073 1019 aa7.91□□□□□ -1.14
NEK3-207ENST00000617054 CDH17Q12864 832 aa7.91□□□□□ -1.14
NEK3-207ENST00000617054 GALNT3Q14435 633 aa7.91□□□□□ -1.14
NEK3-207ENST00000617054 CBX2Q14781 532 aaPredicted RBP7.91□□□□□ -1.14
NEK3-207ENST00000617054 SEPT7Q16181 437 aaKnown RBP7.91□□□□□ -1.14
NEK3-207ENST00000617054 CNGA3Q16281 694 aa7.91□□□□□ -1.14
NEK3-207ENST00000617054 SH2D5Q6ZV89 423 aa7.91□□□□□ -1.14
NEK3-207ENST00000617054 LDB1Q86U70 411 aaPredicted RBP7.91□□□□□ -1.14
NEK3-207ENST00000617054 DENND6AQ8IWF6 608 aa7.91□□□□□ -1.14
NEK3-207ENST00000617054 KREMEN2Q8NCW0 462 aa7.91□□□□□ -1.14
NEK3-207ENST00000617054 CKAP2Q8WWK9 683 aa7.91□□□□□ -1.14
NEK3-207ENST00000617054 CENPTQ96BT3 561 aa7.91□□□□□ -1.14
NEK3-207ENST00000617054 FCRL5Q96RD9 977 aa7.91□□□□□ -1.14
NEK3-207ENST00000617054 SEMA3CQ99985 751 aa7.91□□□□□ -1.14
NEK3-207ENST00000617054 OXCT2Q9BYC2 517 aaPredicted RBP7.91□□□□□ -1.14
NEK3-207ENST00000617054 ZNF395Q9H8N7 513 aaPredicted RBP7.91□□□□□ -1.14
NEK3-207ENST00000617054 LRRC40Q9H9A6 602 aa7.91□□□□□ -1.14
NEK3-207ENST00000617054 ACSS2Q9NR19 701 aa7.91□□□□□ -1.14
NEK3-207ENST00000617054 UXTQ9UBK9 157 aaPredicted RBP7.91□□□□□ -1.14
NEK3-207ENST00000617054 HBS1LQ9Y450 684 aaKnown RBP7.91□□□□□ -1.14
NEK3-207ENST00000617054 PCDHGA10Q9Y5H3 936 aa7.91□□□□□ -1.14
NEK3-207ENST00000617054 WASH4PA8MWX3 477 aa7.9□□□□□ -1.14
NEK3-207ENST00000617054 H3BNC9 293 aa7.9□□□□□ -1.14
NEK3-207ENST00000617054 EBAG9O00559 213 aa7.9□□□□□ -1.14
NEK3-207ENST00000617054 TBL1XO60907 577 aa7.9□□□□□ -1.14
NEK3-207ENST00000617054 BAIAP3O94812 1187 aa7.9□□□□□ -1.14
NEK3-207ENST00000617054 LRG1P02750 347 aa7.9□□□□□ -1.14
NEK3-207ENST00000617054 SNRPAP09012 282 aaKnown RBP7.9□□□□□ -1.14
NEK3-207ENST00000617054 TAC1P20366 129 aa7.9□□□□□ -1.14
NEK3-207ENST00000617054 SCNN1BP51168 640 aa7.9□□□□□ -1.14
NEK3-207ENST00000617054 RENBPP51606 427 aa7.9□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms