RNA–Protein interactions for RNA: ENST00000602783.1

PPFIA3-209, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 1 (best)

Gene PPFIA3, Length 980 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-209ENST00000602783 SEPT11Q9NVA2 429 aaKnown RBP21.64■■□□□ 1.05
PPFIA3-209ENST00000602783 ZNF212Q9UDV6 495 aa21.64■■□□□ 1.05
PPFIA3-209ENST00000602783 ZNF821O75541 412 aaPredicted RBP21.63■■□□□ 1.05
PPFIA3-209ENST00000602783 LEFTY1O75610 366 aa21.63■■□□□ 1.05
PPFIA3-209ENST00000602783 ZMPSTE24O75844 475 aa21.63■■□□□ 1.05
PPFIA3-209ENST00000602783 CKMT2P17540 419 aa21.63■■□□□ 1.05
PPFIA3-209ENST00000602783 SDC4P31431 198 aa21.63■■□□□ 1.05
PPFIA3-209ENST00000602783 DNA2P51530 1060 aa21.63■■□□□ 1.05
PPFIA3-209ENST00000602783 SLC20A2Q08357 652 aa21.63■■□□□ 1.05
PPFIA3-209ENST00000602783 CCDC14Q49A88 953 aa21.63■■□□□ 1.05
PPFIA3-209ENST00000602783 PDZD3Q86UT5 571 aa21.63■■□□□ 1.05
PPFIA3-209ENST00000602783 DRC7Q8IY82 874 aa21.63■■□□□ 1.05
PPFIA3-209ENST00000602783 PPP1R16AQ96I34 528 aa21.63■■□□□ 1.05
PPFIA3-209ENST00000602783 HDAC8Q9BY41 377 aa21.63■■□□□ 1.05
PPFIA3-209ENST00000602783 NAT10Q9H0A0 1025 aaKnown RBP21.63■■□□□ 1.05
PPFIA3-209ENST00000602783 ZFR2Q9UPR6 939 aaKnown RBP21.63■■□□□ 1.05
PPFIA3-209ENST00000602783 WASF2Q9Y6W5 498 aa21.63■■□□□ 1.05
PPFIA3-209ENST00000602783 C2CD4BA6NLJ0 364 aa21.62■■□□□ 1.05
PPFIA3-209ENST00000602783 AKT2P31751 481 aa21.62■■□□□ 1.05
PPFIA3-209ENST00000602783 SERPINH1P50454 418 aaKnown RBP21.62■■□□□ 1.05
PPFIA3-209ENST00000602783 GSCP56915 257 aaPredicted RBP21.62■■□□□ 1.05
PPFIA3-209ENST00000602783 GNA12Q03113 381 aa21.62■■□□□ 1.05
PPFIA3-209ENST00000602783 TARDBPQ13148 414 aaKnown RBP eCLIP21.62■■□□□ 1.05
PPFIA3-209ENST00000602783 HES3Q5TGS1 186 aa21.62■■□□□ 1.05
PPFIA3-209ENST00000602783 CALN1Q9BXU9 219 aa21.62■■□□□ 1.05
PPFIA3-209ENST00000602783 CEP44Q9C0F1 390 aa21.62■■□□□ 1.05
PPFIA3-209ENST00000602783 SCUBE2Q9NQ36 999 aa21.62■■□□□ 1.05
PPFIA3-209ENST00000602783 ADAM22Q9P0K1 906 aa21.62■■□□□ 1.05
PPFIA3-209ENST00000602783 PPARGC1AQ9UBK2 798 aaKnown RBP21.62■■□□□ 1.05
PPFIA3-209ENST00000602783 ITPR1Q14643 2758 aa21.62■■□□□ 1.05
PPFIA3-209ENST00000602783 CHD5Q8TDI0 1954 aa21.61■■□□□ 1.05
PPFIA3-209ENST00000602783 CALB1P05937 261 aa21.61■■□□□ 1.05
PPFIA3-209ENST00000602783 HNRNPA2B1P22626 353 aaKnown RBP21.61■■□□□ 1.05
PPFIA3-209ENST00000602783 PTPN9P43378 593 aa21.61■■□□□ 1.05
PPFIA3-209ENST00000602783 CLDN2P57739 230 aa21.61■■□□□ 1.05
PPFIA3-209ENST00000602783 ARF5P84085 180 aa21.61■■□□□ 1.05
PPFIA3-209ENST00000602783 ILKQ13418 452 aa21.61■■□□□ 1.05
PPFIA3-209ENST00000602783 COL9A2Q14055 689 aaPredicted RBP21.61■■□□□ 1.05
PPFIA3-209ENST00000602783 CARD16Q5EG05 197 aa21.61■■□□□ 1.05
PPFIA3-209ENST00000602783 SEL1L3Q68CR1 1132 aa21.61■■□□□ 1.05
PPFIA3-209ENST00000602783 FBXL19Q6PCT2 694 aa21.61■■□□□ 1.05
PPFIA3-209ENST00000602783 PHF13Q86YI8 300 aaPredicted RBP21.61■■□□□ 1.05
PPFIA3-209ENST00000602783 SLC25A45Q8N413 288 aa21.61■■□□□ 1.05
PPFIA3-209ENST00000602783 PCDH20Q8N6Y1 951 aaKnown RBP21.61■■□□□ 1.05
PPFIA3-209ENST00000602783 OR13H1Q8NG92 308 aa21.61■■□□□ 1.05
PPFIA3-209ENST00000602783 BPIFA3Q9BQP9 254 aa21.61■■□□□ 1.05
PPFIA3-209ENST00000602783 HEPHQ9BQS7 1158 aa21.61■■□□□ 1.05
PPFIA3-209ENST00000602783 SELENOOQ9BVL4 669 aa21.61■■□□□ 1.05
PPFIA3-209ENST00000602783 KLHL11Q9NVR0 708 aa21.61■■□□□ 1.05
PPFIA3-209ENST00000602783 OR12D3Q9UGF7 316 aa21.61■■□□□ 1.05
PPFIA3-209ENST00000602783 FCF1Q9Y324 198 aaKnown RBP21.61■■□□□ 1.05
PPFIA3-209ENST00000602783 ACTL7AQ9Y615 435 aa21.61■■□□□ 1.05
PPFIA3-209ENST00000602783 TRIM38O00635 465 aa21.6■■□□□ 1.05
PPFIA3-209ENST00000602783 TEX33O43247 280 aa21.6■■□□□ 1.05
PPFIA3-209ENST00000602783 SIGLEC6O43699 453 aa21.6■■□□□ 1.05
PPFIA3-209ENST00000602783 KRT3P12035 628 aa21.6■■□□□ 1.05
PPFIA3-209ENST00000602783 DGKAP23743 735 aa21.6■■□□□ 1.05
PPFIA3-209ENST00000602783 ADRA1BP35368 520 aa21.6■■□□□ 1.05
PPFIA3-209ENST00000602783 NEK3P51956 506 aa21.6■■□□□ 1.05
PPFIA3-209ENST00000602783 PROX2Q3B8N5 592 aa21.6■■□□□ 1.05
PPFIA3-209ENST00000602783 ARL13BQ3SXY8 428 aa21.6■■□□□ 1.05
PPFIA3-209ENST00000602783 CAVIN1Q6NZI2 390 aaKnown RBP21.6■■□□□ 1.05
PPFIA3-209ENST00000602783 MON1BQ7L1V2 547 aa21.6■■□□□ 1.05
PPFIA3-209ENST00000602783 STRADAQ7RTN6 431 aa21.6■■□□□ 1.05
PPFIA3-209ENST00000602783 C3orf20Q8ND61 904 aa21.6■■□□□ 1.05
PPFIA3-209ENST00000602783 FAM172AQ8WUF8 416 aa21.6■■□□□ 1.05
PPFIA3-209ENST00000602783 NXPE2Q96DL1 559 aa21.6■■□□□ 1.05
PPFIA3-209ENST00000602783 LRIG1Q96JA1 1093 aa21.6■■□□□ 1.05
PPFIA3-209ENST00000602783 AGPAT1Q99943 283 aa21.6■■□□□ 1.05
PPFIA3-209ENST00000602783 UCKL1Q9NWZ5 548 aa21.6■■□□□ 1.05
PPFIA3-209ENST00000602783 TDRD6O60522 2096 aaKnown RBP21.6■■□□□ 1.05
PPFIA3-209ENST00000602783 ASXL3Q9C0F0 2248 aa21.6■■□□□ 1.05
PPFIA3-209ENST00000602783 TRPM6Q9BX84 2022 aa21.6■■□□□ 1.05
PPFIA3-209ENST00000602783 FERP16591 822 aa21.59■■□□□ 1.05
PPFIA3-209ENST00000602783 GPD1P21695 349 aa21.59■■□□□ 1.05
PPFIA3-209ENST00000602783 ACP1P24666 158 aa21.59■■□□□ 1.05
PPFIA3-209ENST00000602783 L1CAMP32004 1257 aa21.59■■□□□ 1.05
PPFIA3-209ENST00000602783 ACVRL1P37023 503 aa21.59■■□□□ 1.05
PPFIA3-209ENST00000602783 CCNHP51946 323 aaPredicted RBP21.59■■□□□ 1.05
PPFIA3-209ENST00000602783 MAPK8IP2Q13387 824 aaPredicted RBP21.59■■□□□ 1.05
PPFIA3-209ENST00000602783 ZNF211Q13398 564 aaPredicted RBP21.59■■□□□ 1.05
PPFIA3-209ENST00000602783 TMEM259Q4ZIN3 620 aa21.59■■□□□ 1.05
PPFIA3-209ENST00000602783 HS1BP3Q53T59 392 aa21.59■■□□□ 1.05
PPFIA3-209ENST00000602783 MANEALQ5VSG8 457 aa21.59■■□□□ 1.05
PPFIA3-209ENST00000602783 RWDD4Q6NW29 188 aaKnown RBP21.59■■□□□ 1.05
PPFIA3-209ENST00000602783 GCNT7Q6ZNI0 430 aa21.59■■□□□ 1.05
PPFIA3-209ENST00000602783 CCDC185Q8N715 623 aa21.59■■□□□ 1.05
PPFIA3-209ENST00000602783 FEM1CQ96JP0 617 aa21.59■■□□□ 1.05
PPFIA3-209ENST00000602783 MAGEB5Q9BZ81 275 aa21.59■■□□□ 1.05
PPFIA3-209ENST00000602783 NDFIP2Q9NV92 336 aa21.59■■□□□ 1.05
PPFIA3-209ENST00000602783 HECAQ9UBI9 543 aaPredicted RBP21.59■■□□□ 1.05
PPFIA3-209ENST00000602783 AK5Q9Y6K8 562 aa21.59■■□□□ 1.05
PPFIA3-209ENST00000602783 CD160O95971 181 aa21.58■■□□□ 1.05
PPFIA3-209ENST00000602783 ADRB3P13945 408 aa21.58■■□□□ 1.05
PPFIA3-209ENST00000602783 ITGB7P26010 798 aa21.58■■□□□ 1.05
PPFIA3-209ENST00000602783 RFC1P35251 1148 aaPredicted RBP21.58■■□□□ 1.05
PPFIA3-209ENST00000602783 HDAC4P56524 1084 aa21.58■■□□□ 1.05
PPFIA3-209ENST00000602783 NRG1Q02297 640 aaPredicted RBP21.58■■□□□ 1.05
PPFIA3-209ENST00000602783 C1QBPQ07021 282 aaKnown RBP21.58■■□□□ 1.05
PPFIA3-209ENST00000602783 DNAJC24Q6P3W2 148 aa21.58■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms