RNA–Protein interactions for RNA: ENST00000602190.1

IRF3-231, Transcript of interferon regulatory factor 3, human

TSL 3

Gene IRF3, Length 413 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
IRF3-231	ENST00000602190	RABIF	P47224	123 aa		18.68	■□□□□ 0.58
IRF3-231	ENST00000602190	CSRP3	P50461	194 aa		18.68	■□□□□ 0.58
IRF3-231	ENST00000602190	NEK3	P51956	506 aa		18.68	■□□□□ 0.58
IRF3-231	ENST00000602190	CETN1	Q12798	172 aa		18.68	■□□□□ 0.58
IRF3-231	ENST00000602190	EIF2B5	Q13144	721 aa	Known RBP	18.68	■□□□□ 0.58
IRF3-231	ENST00000602190	CDKN3	Q16667	212 aa		18.68	■□□□□ 0.58
IRF3-231	ENST00000602190	EFHC1	Q5JVL4	640 aa		18.68	■□□□□ 0.58
IRF3-231	ENST00000602190	PERM1	Q5SV97	790 aa		18.68	■□□□□ 0.58
IRF3-231	ENST00000602190	XKR5	Q6UX68	686 aa		18.68	■□□□□ 0.58
IRF3-231	ENST00000602190	DPY19L3	Q6ZPD9	716 aa		18.68	■□□□□ 0.58
IRF3-231	ENST00000602190	SLC26A9	Q7LBE3	791 aa		18.68	■□□□□ 0.58
IRF3-231	ENST00000602190	EFL1	Q7Z2Z2	1120 aa	Known RBP	18.68	■□□□□ 0.58
IRF3-231	ENST00000602190	PTAR1	Q7Z6K3	402 aa	Predicted RBP	18.68	■□□□□ 0.58
IRF3-231	ENST00000602190	HSCB	Q8IWL3	235 aa		18.68	■□□□□ 0.58
IRF3-231	ENST00000602190	EXD3	Q8N9H8	876 aa		18.68	■□□□□ 0.58
IRF3-231	ENST00000602190	DENND6B	Q8NEG7	585 aa		18.68	■□□□□ 0.58
IRF3-231	ENST00000602190	ZNF397	Q8NF99	534 aa	Predicted RBP	18.68	■□□□□ 0.58
IRF3-231	ENST00000602190	WDR48	Q8TAF3	677 aa		18.68	■□□□□ 0.58
IRF3-231	ENST00000602190	NT5C3B	Q969T7	300 aa		18.68	■□□□□ 0.58
IRF3-231	ENST00000602190	LIN37	Q96GY3	246 aa	Predicted RBP	18.68	■□□□□ 0.58
IRF3-231	ENST00000602190	DHTKD1	Q96HY7	919 aa	Predicted RBP	18.68	■□□□□ 0.58
IRF3-231	ENST00000602190	HNRNPUL1	Q9BUJ2	856 aa	Known RBP eCLIP	18.68	■□□□□ 0.58
IRF3-231	ENST00000602190	OSBPL2	Q9H1P3	480 aa		18.68	■□□□□ 0.58
IRF3-231	ENST00000602190	ACP6	Q9NPH0	428 aa		18.68	■□□□□ 0.58
IRF3-231	ENST00000602190	IL36A	Q9UHA7	158 aa		18.68	■□□□□ 0.58
IRF3-231	ENST00000602190	ATXN7L1	Q9ULK2	861 aa	Predicted RBP	18.68	■□□□□ 0.58
IRF3-231	ENST00000602190		A0A0D9SEW6	157 aa		18.67	■□□□□ 0.58
IRF3-231	ENST00000602190	CXorf51A	A0A1B0GTR3	108 aa		18.67	■□□□□ 0.58
IRF3-231	ENST00000602190	BECN2	A8MW95	431 aa		18.67	■□□□□ 0.58
IRF3-231	ENST00000602190		H3BM21	787 aa		18.67	■□□□□ 0.58
IRF3-231	ENST00000602190	PYCARD-AS1	I3L0S3	204 aa		18.67	■□□□□ 0.58
IRF3-231	ENST00000602190	TERT	O14746	1132 aa	Known RBP	18.67	■□□□□ 0.58
IRF3-231	ENST00000602190	SLC28A2	O43868	658 aa		18.67	■□□□□ 0.58
IRF3-231	ENST00000602190	LEFTY1	O75610	366 aa		18.67	■□□□□ 0.58
IRF3-231	ENST00000602190	CD44	P16070	742 aa	Known RBP	18.67	■□□□□ 0.58
IRF3-231	ENST00000602190	LINC00303	Q3SY05	128 aa		18.67	■□□□□ 0.58
IRF3-231	ENST00000602190	SLC35F3	Q8IY50	421 aa		18.67	■□□□□ 0.58
IRF3-231	ENST00000602190	ATP11C	Q8NB49	1132 aa		18.67	■□□□□ 0.58
IRF3-231	ENST00000602190	WDR36	Q8NI36	951 aa	Known RBP	18.67	■□□□□ 0.58
IRF3-231	ENST00000602190	PGAP3	Q96FM1	320 aa	Predicted RBP	18.67	■□□□□ 0.58
IRF3-231	ENST00000602190	CCDC34	Q96HJ3	373 aa		18.67	■□□□□ 0.58
IRF3-231	ENST00000602190	PPP1R16A	Q96I34	528 aa		18.67	■□□□□ 0.58
IRF3-231	ENST00000602190	NPY6R	Q99463	290 aa		18.67	■□□□□ 0.58
IRF3-231	ENST00000602190	CEP44	Q9C0F1	390 aa		18.67	■□□□□ 0.58
IRF3-231	ENST00000602190	PNMA8B	Q9ULN7	279 aa	Predicted RBP	18.67	■□□□□ 0.58
IRF3-231	ENST00000602190	PCDHGC3	Q9UN70	934 aa		18.67	■□□□□ 0.58
IRF3-231	ENST00000602190	PCDHGA7	Q9Y5G6	932 aa		18.67	■□□□□ 0.58
IRF3-231	ENST00000602190	COL12A1	Q99715	3063 aa		18.66	■□□□□ 0.58
IRF3-231	ENST00000602190	CASC3	O15234	703 aa	Known RBP	18.66	■□□□□ 0.58
IRF3-231	ENST00000602190	BNIP3L	O60238	219 aa		18.66	■□□□□ 0.58
IRF3-231	ENST00000602190	DAB1	O75553	588 aa		18.66	■□□□□ 0.58
IRF3-231	ENST00000602190	LETM1	O95202	739 aa	Predicted RBP	18.66	■□□□□ 0.58
IRF3-231	ENST00000602190	PCDH8	O95206	1070 aa		18.66	■□□□□ 0.58
IRF3-231	ENST00000602190	PAK4	O96013	591 aa	Predicted RBP	18.66	■□□□□ 0.58
IRF3-231	ENST00000602190	L1CAM	P32004	1257 aa		18.66	■□□□□ 0.58
IRF3-231	ENST00000602190	CXCR3	P49682	368 aa		18.66	■□□□□ 0.58
IRF3-231	ENST00000602190	SRSF1	Q07955	248 aa	Known RBP eCLIP	18.66	■□□□□ 0.58
IRF3-231	ENST00000602190	ARSI	Q5FYB1	569 aa		18.66	■□□□□ 0.58
IRF3-231	ENST00000602190	BRMS1L	Q5PSV4	323 aa		18.66	■□□□□ 0.58
IRF3-231	ENST00000602190	CCDC81	Q6ZN84	652 aa		18.66	■□□□□ 0.58
IRF3-231	ENST00000602190	PLPP6	Q8IY26	295 aa		18.66	■□□□□ 0.58
IRF3-231	ENST00000602190	NAT6	Q93015	286 aa		18.66	■□□□□ 0.58
IRF3-231	ENST00000602190	RNF34	Q969K3	372 aa		18.66	■□□□□ 0.58
IRF3-231	ENST00000602190	MUC3B	Q9H195	1237 aa		18.66	■□□□□ 0.58
IRF3-231	ENST00000602190	DYRK4	Q9NR20	520 aa		18.66	■□□□□ 0.58
IRF3-231	ENST00000602190	STARD5	Q9NSY2	213 aa		18.66	■□□□□ 0.58
IRF3-231	ENST00000602190	PIGV	Q9NUD9	493 aa		18.66	■□□□□ 0.58
IRF3-231	ENST00000602190	FLNC	Q14315	2725 aa		18.65	■□□□□ 0.58
IRF3-231	ENST00000602190	CCDC187	A0A096LP49	1063 aa		18.65	■□□□□ 0.58
IRF3-231	ENST00000602190	LMO7DN	F2Z398	122 aa		18.65	■□□□□ 0.58
IRF3-231	ENST00000602190	PSMA7	O14818	248 aa		18.65	■□□□□ 0.58
IRF3-231	ENST00000602190	NOBOX	O60393	691 aa		18.65	■□□□□ 0.58
IRF3-231	ENST00000602190	GCAT	O75600	419 aa		18.65	■□□□□ 0.58
IRF3-231	ENST00000602190	CD160	O95971	181 aa		18.65	■□□□□ 0.58
IRF3-231	ENST00000602190	HSP90AA1	P07900	732 aa	Known RBP	18.65	■□□□□ 0.58
IRF3-231	ENST00000602190	RHOC	P08134	193 aa		18.65	■□□□□ 0.58
IRF3-231	ENST00000602190	ITGB6	P18564	788 aa		18.65	■□□□□ 0.58
IRF3-231	ENST00000602190	GNA15	P30679	374 aa		18.65	■□□□□ 0.58
IRF3-231	ENST00000602190	NOS2	P35228	1153 aa		18.65	■□□□□ 0.58
IRF3-231	ENST00000602190	SERPINH1	P50454	418 aa	Known RBP	18.65	■□□□□ 0.58
IRF3-231	ENST00000602190	NR0B2	Q15466	257 aa		18.65	■□□□□ 0.58
IRF3-231	ENST00000602190	C6orf132	Q5T0Z8	1188 aa		18.65	■□□□□ 0.58
IRF3-231	ENST00000602190	ZNF783	Q6ZMS7	281 aa		18.65	■□□□□ 0.58
IRF3-231	ENST00000602190	PARS2	Q7L3T8	475 aa	Known RBP	18.65	■□□□□ 0.58
IRF3-231	ENST00000602190	ENOSF1	Q7L5Y1	443 aa		18.65	■□□□□ 0.58
IRF3-231	ENST00000602190	BNIPL	Q7Z465	357 aa		18.65	■□□□□ 0.58
IRF3-231	ENST00000602190	ARL14	Q8N4G2	192 aa		18.65	■□□□□ 0.58
IRF3-231	ENST00000602190	PCDH20	Q8N6Y1	951 aa	Known RBP	18.65	■□□□□ 0.58
IRF3-231	ENST00000602190	FEM1C	Q96JP0	617 aa		18.65	■□□□□ 0.58
IRF3-231	ENST00000602190	C1orf74	Q96LT6	269 aa		18.65	■□□□□ 0.58
IRF3-231	ENST00000602190	CCNL2	Q96S94	520 aa	Predicted RBP	18.65	■□□□□ 0.58
IRF3-231	ENST00000602190	INTS2	Q9H0H0	1204 aa	Known RBP	18.65	■□□□□ 0.58
IRF3-231	ENST00000602190	CPED1	A4D0V7	1026 aa		18.64	■□□□□ 0.57
IRF3-231	ENST00000602190	ADCY5	O95622	1261 aa		18.64	■□□□□ 0.57
IRF3-231	ENST00000602190	JUND	P17535	347 aa		18.64	■□□□□ 0.57
IRF3-231	ENST00000602190	PDE1C	Q14123	709 aa	Predicted RBP	18.64	■□□□□ 0.57
IRF3-231	ENST00000602190	DRAP1	Q14919	205 aa	Predicted RBP	18.64	■□□□□ 0.57
IRF3-231	ENST00000602190	DEFB133	Q30KQ1	61 aa		18.64	■□□□□ 0.57
IRF3-231	ENST00000602190	CCDC40	Q4G0X9	1142 aa		18.64	■□□□□ 0.57
IRF3-231	ENST00000602190	FAM183BP	Q6ZVS7	135 aa		18.64	■□□□□ 0.57

Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms