RNA–Protein interactions for RNA: ENST00000597901.1

LIG1-215, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-215ENST00000597901 LEKR1Q6ZMV7 388 aa15.36■□□□□ 0.05
LIG1-215ENST00000597901 RAB44Q7Z6P3 723 aaPredicted RBP15.36■□□□□ 0.05
LIG1-215ENST00000597901 DNAAF5Q86Y56 855 aa15.36■□□□□ 0.05
LIG1-215ENST00000597901 GRIN3AQ8TCU5 1115 aa15.36■□□□□ 0.05
LIG1-215ENST00000597901 ADAMTS14Q8WXS8 1223 aa15.36■□□□□ 0.05
LIG1-215ENST00000597901 TTYH3Q9C0H2 523 aa15.36■□□□□ 0.05
LIG1-215ENST00000597901 NOL6Q9H6R4 1146 aaKnown RBP15.36■□□□□ 0.05
LIG1-215ENST00000597901 GDF3Q9NR23 364 aa15.36■□□□□ 0.05
LIG1-215ENST00000597901 KLK13Q9UKR3 277 aa15.36■□□□□ 0.05
LIG1-215ENST00000597901 APOBEC2Q9Y235 224 aaKnown RBP15.36■□□□□ 0.05
LIG1-215ENST00000597901 NEUROG3Q9Y4Z2 214 aa15.36■□□□□ 0.05
LIG1-215ENST00000597901 TMEM191CA6NGB0 347 aa15.35■□□□□ 0.05
LIG1-215ENST00000597901 WASH4PA8MWX3 477 aa15.35■□□□□ 0.05
LIG1-215ENST00000597901 PRAMEF26H0Y7S4 382 aa15.35■□□□□ 0.05
LIG1-215ENST00000597901 DDX3XO00571 662 aaKnown RBP eCLIP15.35■□□□□ 0.05
LIG1-215ENST00000597901 SLC31A1O15431 190 aa15.35■□□□□ 0.05
LIG1-215ENST00000597901 CREB3O43889 395 aa15.35■□□□□ 0.05
LIG1-215ENST00000597901 ATXN1LP0C7T5 689 aaKnown RBP15.35■□□□□ 0.05
LIG1-215ENST00000597901 GRK6P43250 576 aa15.35■□□□□ 0.05
LIG1-215ENST00000597901 CCNHP51946 323 aaPredicted RBP15.35■□□□□ 0.05
LIG1-215ENST00000597901 GEMIN4P57678 1058 aaKnown RBP15.35■□□□□ 0.05
LIG1-215ENST00000597901 NXPH1P58417 271 aa15.35■□□□□ 0.05
LIG1-215ENST00000597901 FANCCQ00597 558 aa15.35■□□□□ 0.05
LIG1-215ENST00000597901 KLHL30Q0D2K2 578 aa15.35■□□□□ 0.05
LIG1-215ENST00000597901 SETMARQ53H47 684 aaPredicted RBP15.35■□□□□ 0.05
LIG1-215ENST00000597901 TMC6Q7Z403 805 aa15.35■□□□□ 0.05
LIG1-215ENST00000597901 LUZP1Q86V48 1076 aa15.35■□□□□ 0.05
LIG1-215ENST00000597901 IQCHQ86VS3 1027 aa15.35■□□□□ 0.05
LIG1-215ENST00000597901 HORMAD1Q86X24 394 aa15.35■□□□□ 0.05
LIG1-215ENST00000597901 SPATS2Q86XZ4 545 aaKnown RBP15.35■□□□□ 0.05
LIG1-215ENST00000597901 RYBPQ8N488 228 aaPredicted RBP15.35■□□□□ 0.05
LIG1-215ENST00000597901 ARFGAP1Q8N6T3 406 aa15.35■□□□□ 0.05
LIG1-215ENST00000597901 RTL3Q8N8U3 475 aaKnown RBP15.35■□□□□ 0.05
LIG1-215ENST00000597901 KLK6Q92876 244 aa15.35■□□□□ 0.05
LIG1-215ENST00000597901 PPP1R16AQ96I34 528 aa15.35■□□□□ 0.05
LIG1-215ENST00000597901 ERVMER34-1Q9H9K5 563 aa15.35■□□□□ 0.05
LIG1-215ENST00000597901 MSRB2Q9Y3D2 182 aa15.35■□□□□ 0.05
LIG1-215ENST00000597901 CACNA1EQ15878 2313 aa15.35■□□□□ 0.05
LIG1-215ENST00000597901 ACACBO00763 2458 aa15.34■□□□□ 0.05
LIG1-215ENST00000597901 BUB1O43683 1085 aa15.34■□□□□ 0.05
LIG1-215ENST00000597901 MAGEC1O60732 1142 aa15.34■□□□□ 0.05
LIG1-215ENST00000597901 PCDH8O95206 1070 aa15.34■□□□□ 0.05
LIG1-215ENST00000597901 POP4O95707 220 aaKnown RBP15.34■□□□□ 0.05
LIG1-215ENST00000597901 DESP17661 470 aa15.34■□□□□ 0.05
LIG1-215ENST00000597901 PSMA2P25787 234 aa15.34■□□□□ 0.05
LIG1-215ENST00000597901 GKP32189 559 aa15.34■□□□□ 0.05
LIG1-215ENST00000597901 RXRGP48443 463 aa15.34■□□□□ 0.05
LIG1-215ENST00000597901 YBEYP58557 167 aaPredicted RBP15.34■□□□□ 0.05
LIG1-215ENST00000597901 TPM4P67936 248 aa15.34■□□□□ 0.05
LIG1-215ENST00000597901 OVGP1Q12889 678 aa15.34■□□□□ 0.05
LIG1-215ENST00000597901 ZNF284Q2VY69 593 aa15.34■□□□□ 0.05
LIG1-215ENST00000597901 MYLK3Q32MK0 819 aa15.34■□□□□ 0.05
LIG1-215ENST00000597901 FIGNQ5HY92 759 aa15.34■□□□□ 0.05
LIG1-215ENST00000597901 FBXL19Q6PCT2 694 aa15.34■□□□□ 0.05
LIG1-215ENST00000597901 GATAD2AQ86YP4 633 aa15.34■□□□□ 0.05
LIG1-215ENST00000597901 SAP25Q8TEE9 199 aa15.34■□□□□ 0.05
LIG1-215ENST00000597901 GATA6Q92908 595 aa15.34■□□□□ 0.05
LIG1-215ENST00000597901 KLHDC7BQ96G42 594 aa15.34■□□□□ 0.05
LIG1-215ENST00000597901 LRIG1Q96JA1 1093 aa15.34■□□□□ 0.05
LIG1-215ENST00000597901 EPAS1Q99814 870 aa15.34■□□□□ 0.05
LIG1-215ENST00000597901 TMEM121BQ9BXQ6 578 aaPredicted RBP15.34■□□□□ 0.05
LIG1-215ENST00000597901 TM6SF2Q9BZW4 377 aa15.34■□□□□ 0.05
LIG1-215ENST00000597901 KLC2Q9H0B6 622 aa15.34■□□□□ 0.05
LIG1-215ENST00000597901 CATSPERBQ9H7T0 1116 aa15.34■□□□□ 0.05
LIG1-215ENST00000597901 ZFR2Q9UPR6 939 aaKnown RBP15.34■□□□□ 0.05
LIG1-215ENST00000597901 CA5BQ9Y2D0 317 aa15.34■□□□□ 0.05
LIG1-215ENST00000597901 TPRP12270 2363 aaKnown RBP15.33■□□□□ 0.04
LIG1-215ENST00000597901 ZSCAN5CA6NGD5 496 aaPredicted RBP15.33■□□□□ 0.04
LIG1-215ENST00000597901 RASA4BC9J798 803 aa15.33■□□□□ 0.04
LIG1-215ENST00000597901 ATMINO43313 823 aaPredicted RBP15.33■□□□□ 0.04
LIG1-215ENST00000597901 RASA4O43374 803 aa15.33■□□□□ 0.04
LIG1-215ENST00000597901 TNFSF14O43557 240 aa15.33■□□□□ 0.04
LIG1-215ENST00000597901 ITGAVP06756 1048 aa15.33■□□□□ 0.04
LIG1-215ENST00000597901 PRLRP16471 622 aa15.33■□□□□ 0.04
LIG1-215ENST00000597901 ITGB7P26010 798 aa15.33■□□□□ 0.04
LIG1-215ENST00000597901 PBX1P40424 430 aa15.33■□□□□ 0.04
LIG1-215ENST00000597901 ARRB1P49407 418 aaPredicted RBP15.33■□□□□ 0.04
LIG1-215ENST00000597901 NEK3P51956 506 aa15.33■□□□□ 0.04
LIG1-215ENST00000597901 UBASH3AP57075 661 aa15.33■□□□□ 0.04
LIG1-215ENST00000597901 SNRPD1P62314 119 aaKnown RBP15.33■□□□□ 0.04
LIG1-215ENST00000597901 BNIP3Q12983 259 aa15.33■□□□□ 0.04
LIG1-215ENST00000597901 ERMARDQ5T6L9 678 aa15.33■□□□□ 0.04
LIG1-215ENST00000597901 ZNF354CQ86Y25 554 aa15.33■□□□□ 0.04
LIG1-215ENST00000597901 UMODL1-AS1Q8N2C9 162 aa15.33■□□□□ 0.04
LIG1-215ENST00000597901 OR2AP1Q8NGE2 309 aa15.33■□□□□ 0.04
LIG1-215ENST00000597901 OR6K2Q8NGY2 324 aa15.33■□□□□ 0.04
LIG1-215ENST00000597901 VOPP1Q96AW1 172 aa15.33■□□□□ 0.04
LIG1-215ENST00000597901 HMCESQ96FZ2 354 aa15.33■□□□□ 0.04
LIG1-215ENST00000597901 FEM1CQ96JP0 617 aa15.33■□□□□ 0.04
LIG1-215ENST00000597901 ISCUQ9H1K1 167 aa15.33■□□□□ 0.04
LIG1-215ENST00000597901 ZDHHC6Q9H6R6 413 aa15.33■□□□□ 0.04
LIG1-215ENST00000597901 GPATCH2LQ9NWQ4 482 aa15.33■□□□□ 0.04
LIG1-215ENST00000597901 TOR4AQ9NXH8 423 aa15.33■□□□□ 0.04
LIG1-215ENST00000597901 CNOT8Q9UFF9 292 aaKnown RBP15.33■□□□□ 0.04
LIG1-215ENST00000597901 PCSK1NQ9UHG2 260 aa15.33■□□□□ 0.04
LIG1-215ENST00000597901 GOLGA8CPA6NN73 597 aa15.32■□□□□ 0.04
LIG1-215ENST00000597901 C16orf96A6NNT2 1141 aa15.32■□□□□ 0.04
LIG1-215ENST00000597901 KRIT1O00522 736 aa15.32■□□□□ 0.04
LIG1-215ENST00000597901 DKK1O94907 266 aa15.32■□□□□ 0.04
LIG1-215ENST00000597901 GSRP00390 522 aa15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms