RNA–Protein interactions for RNA: ENST00000597354.1

CAPN12-206, Transcript of calpain 12, humanhuman

TSL 3

Gene CAPN12, Length 519 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN12-206ENST00000597354 PTMAP06454 111 aaKnown RBP17.04■□□□□ 0.32
CAPN12-206ENST00000597354 KRT10P13645 584 aa17.04■□□□□ 0.32
CAPN12-206ENST00000597354 C5AR1P21730 350 aa17.04■□□□□ 0.32
CAPN12-206ENST00000597354 OXTRP30559 389 aa17.04■□□□□ 0.32
CAPN12-206ENST00000597354 PTGER3P43115 390 aa17.04■□□□□ 0.32
CAPN12-206ENST00000597354 GBE1Q04446 702 aa17.04■□□□□ 0.32
CAPN12-206ENST00000597354 IL10RBQ08334 325 aa17.04■□□□□ 0.32
CAPN12-206ENST00000597354 PAFAH1B3Q15102 231 aaKnown RBP17.04■□□□□ 0.32
CAPN12-206ENST00000597354 KAZNQ674X7 775 aa17.04■□□□□ 0.32
CAPN12-206ENST00000597354 LAIR1Q6GTX8 287 aa17.04■□□□□ 0.32
CAPN12-206ENST00000597354 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP17.04■□□□□ 0.32
CAPN12-206ENST00000597354 SLC36A4Q6YBV0 504 aa17.04■□□□□ 0.32
CAPN12-206ENST00000597354 LPCAT2Q7L5N7 544 aa17.04■□□□□ 0.32
CAPN12-206ENST00000597354 C11orf74Q86VG3 221 aa17.04■□□□□ 0.32
CAPN12-206ENST00000597354 ATPAF2Q8N5M1 289 aa17.04■□□□□ 0.32
CAPN12-206ENST00000597354 LRRC57Q8N9N7 239 aa17.04■□□□□ 0.32
CAPN12-206ENST00000597354 TRAF3IP1Q8TDR0 691 aaPredicted RBP17.04■□□□□ 0.32
CAPN12-206ENST00000597354 ISG20Q96AZ6 181 aaKnown RBP17.04■□□□□ 0.32
CAPN12-206ENST00000597354 HEPHQ9BQS7 1158 aa17.04■□□□□ 0.32
CAPN12-206ENST00000597354 ARRDC1-AS1Q9H2J1 176 aa17.04■□□□□ 0.32
CAPN12-206ENST00000597354 LHX3Q9UBR4 397 aa17.04■□□□□ 0.32
CAPN12-206ENST00000597354 EVLQ9UI08 416 aaPredicted RBP17.04■□□□□ 0.32
CAPN12-206ENST00000597354 NCKAP1Q9Y2A7 1128 aa17.04■□□□□ 0.32
CAPN12-206ENST00000597354 WASF2Q9Y6W5 498 aa17.04■□□□□ 0.32
CAPN12-206ENST00000597354 FAM47DPA6NHR8 397 aa17.03■□□□□ 0.32
CAPN12-206ENST00000597354 C1QTNF3-AMACRE9PGA6 284 aa17.03■□□□□ 0.32
CAPN12-206ENST00000597354 KRIT1O00522 736 aa17.03■□□□□ 0.32
CAPN12-206ENST00000597354 ALOX15BO15296 676 aa17.03■□□□□ 0.32
CAPN12-206ENST00000597354 INSIG1O15503 277 aa17.03■□□□□ 0.32
CAPN12-206ENST00000597354 NRDCO43847 1150 aa17.03■□□□□ 0.32
CAPN12-206ENST00000597354 MAFKO60675 156 aa17.03■□□□□ 0.32
CAPN12-206ENST00000597354 LEFTY1O75610 366 aa17.03■□□□□ 0.32
CAPN12-206ENST00000597354 FTCDO95954 541 aa17.03■□□□□ 0.32
CAPN12-206ENST00000597354 SNRPD1P62314 119 aaKnown RBP17.03■□□□□ 0.32
CAPN12-206ENST00000597354 CREB5Q02930 508 aa17.03■□□□□ 0.32
CAPN12-206ENST00000597354 SLC10A2Q12908 348 aaPredicted RBP17.03■□□□□ 0.32
CAPN12-206ENST00000597354 INO80DQ53TQ3 878 aaPredicted RBP17.03■□□□□ 0.32
CAPN12-206ENST00000597354 FAM46CQ5VWP2 391 aa17.03■□□□□ 0.32
CAPN12-206ENST00000597354 NPNTQ6UXI9 565 aa17.03■□□□□ 0.32
CAPN12-206ENST00000597354 SPOCD1Q6ZMY3 1216 aa17.03■□□□□ 0.32
CAPN12-206ENST00000597354 SLC41A1Q8IVJ1 513 aa17.03■□□□□ 0.32
CAPN12-206ENST00000597354 CCDC50Q8IVM0 306 aa17.03■□□□□ 0.32
CAPN12-206ENST00000597354 OR2AP1Q8NGE2 309 aa17.03■□□□□ 0.32
CAPN12-206ENST00000597354 ARRDC3Q96B67 414 aa17.03■□□□□ 0.32
CAPN12-206ENST00000597354 CALR3Q96L12 384 aaKnown RBP17.03■□□□□ 0.32
CAPN12-206ENST00000597354 BTBD1Q9H0C5 482 aa17.03■□□□□ 0.32
CAPN12-206ENST00000597354 LZTFL1Q9NQ48 299 aa17.03■□□□□ 0.32
CAPN12-206ENST00000597354 GMEB2Q9UKD1 530 aa17.03■□□□□ 0.32
CAPN12-206ENST00000597354 PACSIN2Q9UNF0 486 aaPredicted RBP17.03■□□□□ 0.32
CAPN12-206ENST00000597354 HEY1Q9Y5J3 304 aa17.03■□□□□ 0.32
CAPN12-206ENST00000597354 CAPN6Q9Y6Q1 641 aa17.03■□□□□ 0.32
CAPN12-206ENST00000597354 CEP192Q8TEP8 1941 aa17.03■□□□□ 0.32
CAPN12-206ENST00000597354 SHROOM3Q8TF72 1996 aa17.02■□□□□ 0.32
CAPN12-206ENST00000597354 ATXN2Q99700 1313 aaKnown RBP17.02■□□□□ 0.32
CAPN12-206ENST00000597354 CXorf51AA0A1B0GTR3 108 aa17.02■□□□□ 0.32
CAPN12-206ENST00000597354 APOL1O14791 398 aa17.02■□□□□ 0.32
CAPN12-206ENST00000597354 GJB3O75712 270 aa17.02■□□□□ 0.32
CAPN12-206ENST00000597354 IGSF6O95976 241 aa17.02■□□□□ 0.32
CAPN12-206ENST00000597354 GSRP00390 522 aa17.02■□□□□ 0.32
CAPN12-206ENST00000597354 IGLV3-19P01714 112 aa17.02■□□□□ 0.32
CAPN12-206ENST00000597354 PRNPP04156 253 aa17.02■□□□□ 0.32
CAPN12-206ENST00000597354 CCDC175P0C221 793 aa17.02■□□□□ 0.32
CAPN12-206ENST00000597354 CTNNA1P35221 906 aaKnown RBP17.02■□□□□ 0.32
CAPN12-206ENST00000597354 DRD3P35462 400 aa17.02■□□□□ 0.32
CAPN12-206ENST00000597354 CDKN2BP42772 138 aa17.02■□□□□ 0.32
CAPN12-206ENST00000597354 RGRP47804 291 aa17.02■□□□□ 0.32
CAPN12-206ENST00000597354 SLC10A7Q0GE19 358 aa17.02■□□□□ 0.32
CAPN12-206ENST00000597354 SPEM2Q0P670 501 aa17.02■□□□□ 0.32
CAPN12-206ENST00000597354 CNTN1Q12860 1018 aa17.02■□□□□ 0.32
CAPN12-206ENST00000597354 IFI16Q16666 785 aaKnown RBP17.02■□□□□ 0.32
CAPN12-206ENST00000597354 MYLK3Q32MK0 819 aa17.02■□□□□ 0.32
CAPN12-206ENST00000597354 FAM182AQ5T1J6 154 aa17.02■□□□□ 0.32
CAPN12-206ENST00000597354 B4GALNT4Q76KP1 1039 aa17.02■□□□□ 0.32
CAPN12-206ENST00000597354 PEX26Q7Z412 305 aa17.02■□□□□ 0.32
CAPN12-206ENST00000597354 NT5DC3Q86UY8 548 aa17.02■□□□□ 0.32
CAPN12-206ENST00000597354 KATNAL2Q8IYT4 538 aa17.02■□□□□ 0.32
CAPN12-206ENST00000597354 PLD5Q8N7P1 536 aa17.02■□□□□ 0.32
CAPN12-206ENST00000597354 TSEN2Q8NCE0 465 aaKnown RBP17.02■□□□□ 0.32
CAPN12-206ENST00000597354 CASKIN2Q8WXE0 1202 aa17.02■□□□□ 0.32
CAPN12-206ENST00000597354 HSPA12BQ96MM6 686 aa17.02■□□□□ 0.32
CAPN12-206ENST00000597354 GDAP1L1Q96MZ0 367 aa17.02■□□□□ 0.32
CAPN12-206ENST00000597354 CINPQ9BW66 212 aaPredicted RBP17.02■□□□□ 0.32
CAPN12-206ENST00000597354 SMOC1Q9H4F8 434 aa17.02■□□□□ 0.32
CAPN12-206ENST00000597354 C6orf106Q9H6K1 298 aaPredicted RBP17.02■□□□□ 0.32
CAPN12-206ENST00000597354 AMFRQ9UKV5 643 aa17.02■□□□□ 0.32
CAPN12-206ENST00000597354 SCML1Q9UN30 329 aa17.02■□□□□ 0.32
CAPN12-206ENST00000597354 SBDSQ9Y3A5 250 aaKnown RBP eCLIP17.02■□□□□ 0.32
CAPN12-206ENST00000597354 PCDHA3Q9Y5H8 950 aa17.02■□□□□ 0.32
CAPN12-206ENST00000597354 VPS13AQ96RL7 3174 aa17.01■□□□□ 0.31
CAPN12-206ENST00000597354 TTC24A2A3L6 582 aaPredicted RBP17.01■□□□□ 0.31
CAPN12-206ENST00000597354 KRT86O43790 486 aa17.01■□□□□ 0.31
CAPN12-206ENST00000597354 ZRANB2O95218 330 aaKnown RBP eCLIP17.01■□□□□ 0.31
CAPN12-206ENST00000597354 SEMA4FO95754 770 aa17.01■□□□□ 0.31
CAPN12-206ENST00000597354 RETP07949 1114 aa17.01■□□□□ 0.31
CAPN12-206ENST00000597354 C7P10643 843 aa17.01■□□□□ 0.31
CAPN12-206ENST00000597354 ITPKAP23677 461 aa17.01■□□□□ 0.31
CAPN12-206ENST00000597354 MAOBP27338 520 aa17.01■□□□□ 0.31
CAPN12-206ENST00000597354 ZNF33AQ06730 810 aa17.01■□□□□ 0.31
CAPN12-206ENST00000597354 GALNT2Q10471 571 aa17.01■□□□□ 0.31
CAPN12-206ENST00000597354 LBRQ14739 615 aaKnown RBP17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms