RNA–Protein interactions for RNA: ENST00000592815.5

CIRBP-240, Transcript of cold inducible RNA binding protein, humanhuman

TSL 4

Gene CIRBP, Length 334 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-240ENST00000592815 MAPKAPK2P49137 400 aa16.39■□□□□ 0.21
CIRBP-240ENST00000592815 HDAC4P56524 1084 aa16.39■□□□□ 0.21
CIRBP-240ENST00000592815 SFMBT2Q5VUG0 894 aa16.39■□□□□ 0.21
CIRBP-240ENST00000592815 SEL1L3Q68CR1 1132 aa16.39■□□□□ 0.21
CIRBP-240ENST00000592815 FBXL19Q6PCT2 694 aa16.39■□□□□ 0.21
CIRBP-240ENST00000592815 WDR59Q6PJI9 974 aa16.39■□□□□ 0.21
CIRBP-240ENST00000592815 KANSL1Q7Z3B3 1105 aa16.39■□□□□ 0.21
CIRBP-240ENST00000592815 NLRP14Q86W24 1093 aa16.39■□□□□ 0.21
CIRBP-240ENST00000592815 TMPRSS12Q86WS5 348 aa16.39■□□□□ 0.21
CIRBP-240ENST00000592815 PHF13Q86YI8 300 aaPredicted RBP16.39■□□□□ 0.21
CIRBP-240ENST00000592815 RYBPQ8N488 228 aaPredicted RBP16.39■□□□□ 0.21
CIRBP-240ENST00000592815 CCDC185Q8N715 623 aa16.39■□□□□ 0.21
CIRBP-240ENST00000592815 TMEM145Q8NBT3 493 aa16.39■□□□□ 0.21
CIRBP-240ENST00000592815 ARHGEF2Q92974 986 aaKnown RBP16.39■□□□□ 0.21
CIRBP-240ENST00000592815 RETREG1Q9H6L5 497 aa16.39■□□□□ 0.21
CIRBP-240ENST00000592815 HECAQ9UBI9 543 aaPredicted RBP16.39■□□□□ 0.21
CIRBP-240ENST00000592815 ZFR2Q9UPR6 939 aaKnown RBP16.39■□□□□ 0.21
CIRBP-240ENST00000592815 FAM208BQ5VWN6 2430 aa16.39■□□□□ 0.21
CIRBP-240ENST00000592815 ZFYVE26Q68DK2 2539 aa16.39■□□□□ 0.21
CIRBP-240ENST00000592815 SIGLEC16A6NMB1 481 aa16.38■□□□□ 0.21
CIRBP-240ENST00000592815 GOLGA6L22H0YM25 854 aa16.38■□□□□ 0.21
CIRBP-240ENST00000592815 CD160O95971 181 aa16.38■□□□□ 0.21
CIRBP-240ENST00000592815 JUPP14923 745 aa16.38■□□□□ 0.21
CIRBP-240ENST00000592815 GPD1P21695 349 aa16.38■□□□□ 0.21
CIRBP-240ENST00000592815 L1CAMP32004 1257 aa16.38■□□□□ 0.21
CIRBP-240ENST00000592815 CCNHP51946 323 aaPredicted RBP16.38■□□□□ 0.21
CIRBP-240ENST00000592815 NEK3P51956 506 aa16.38■□□□□ 0.21
CIRBP-240ENST00000592815 CLDN6P56747 220 aa16.38■□□□□ 0.21
CIRBP-240ENST00000592815 CLDN2P57739 230 aa16.38■□□□□ 0.21
CIRBP-240ENST00000592815 CYP4F3Q08477 520 aa16.38■□□□□ 0.21
CIRBP-240ENST00000592815 MAPK8IP2Q13387 824 aaPredicted RBP16.38■□□□□ 0.21
CIRBP-240ENST00000592815 CAMK2BQ13554 666 aa16.38■□□□□ 0.21
CIRBP-240ENST00000592815 C19orf48Q6RUI8 117 aa16.38■□□□□ 0.21
CIRBP-240ENST00000592815 LEKR1Q6ZMV7 388 aa16.38■□□□□ 0.21
CIRBP-240ENST00000592815 PDCD7Q8N8D1 485 aaKnown RBP16.38■□□□□ 0.21
CIRBP-240ENST00000592815 TSC1Q92574 1164 aa16.38■□□□□ 0.21
CIRBP-240ENST00000592815 ISG20Q96AZ6 181 aaKnown RBP16.38■□□□□ 0.21
CIRBP-240ENST00000592815 TBC1D31Q96DN5 1066 aa16.38■□□□□ 0.21
CIRBP-240ENST00000592815 FEM1CQ96JP0 617 aa16.38■□□□□ 0.21
CIRBP-240ENST00000592815 AGPAT1Q99943 283 aa16.38■□□□□ 0.21
CIRBP-240ENST00000592815 TM6SF2Q9BZW4 377 aa16.38■□□□□ 0.21
CIRBP-240ENST00000592815 MAGEH1Q9H213 219 aa16.38■□□□□ 0.21
CIRBP-240ENST00000592815 ZDHHC6Q9H6R6 413 aa16.38■□□□□ 0.21
CIRBP-240ENST00000592815 KLHL11Q9NVR0 708 aa16.38■□□□□ 0.21
CIRBP-240ENST00000592815 TMEM248Q9NWD8 314 aa16.38■□□□□ 0.21
CIRBP-240ENST00000592815 HPCAL4Q9UM19 191 aa16.38■□□□□ 0.21
CIRBP-240ENST00000592815 LHX6Q9UPM6 363 aa16.38■□□□□ 0.21
CIRBP-240ENST00000592815 KNTC1P50748 2209 aa16.37■□□□□ 0.21
CIRBP-240ENST00000592815 RAMP2O60895 175 aa16.37■□□□□ 0.21
CIRBP-240ENST00000592815 RFPL3O75679 317 aa16.37■□□□□ 0.21
CIRBP-240ENST00000592815 CDK4P11802 303 aa16.37■□□□□ 0.21
CIRBP-240ENST00000592815 ADRB3P13945 408 aa16.37■□□□□ 0.21
CIRBP-240ENST00000592815 HNRNPA2B1P22626 353 aaKnown RBP16.37■□□□□ 0.21
CIRBP-240ENST00000592815 ITGB7P26010 798 aa16.37■□□□□ 0.21
CIRBP-240ENST00000592815 GKP32189 559 aa16.37■□□□□ 0.21
CIRBP-240ENST00000592815 ACADVLP49748 655 aa16.37■□□□□ 0.21
CIRBP-240ENST00000592815 RPS21P63220 83 aaKnown RBP16.37■□□□□ 0.21
CIRBP-240ENST00000592815 NCAPHQ15003 741 aa16.37■□□□□ 0.21
CIRBP-240ENST00000592815 POLD3Q15054 466 aaPredicted RBP16.37■□□□□ 0.21
CIRBP-240ENST00000592815 TMEM259Q4ZIN3 620 aa16.37■□□□□ 0.21
CIRBP-240ENST00000592815 SCYL2Q6P3W7 929 aa16.37■□□□□ 0.21
CIRBP-240ENST00000592815 SLFN11Q7Z7L1 901 aa16.37■□□□□ 0.21
CIRBP-240ENST00000592815 PLPP6Q8IY26 295 aa16.37■□□□□ 0.21
CIRBP-240ENST00000592815 PYROXD2Q8N2H3 581 aa16.37■□□□□ 0.21
CIRBP-240ENST00000592815 SLC25A45Q8N413 288 aa16.37■□□□□ 0.21
CIRBP-240ENST00000592815 C3orf20Q8ND61 904 aa16.37■□□□□ 0.21
CIRBP-240ENST00000592815 OR13H1Q8NG92 308 aa16.37■□□□□ 0.21
CIRBP-240ENST00000592815 OR6K2Q8NGY2 324 aa16.37■□□□□ 0.21
CIRBP-240ENST00000592815 NTAN1Q96AB6 310 aa16.37■□□□□ 0.21
CIRBP-240ENST00000592815 ERGIC2Q96RQ1 377 aa16.37■□□□□ 0.21
CIRBP-240ENST00000592815 CALN1Q9BXU9 219 aa16.37■□□□□ 0.21
CIRBP-240ENST00000592815 SLC17A9Q9BYT1 436 aa16.37■□□□□ 0.21
CIRBP-240ENST00000592815 RAXQ9Y2V3 346 aa16.37■□□□□ 0.21
CIRBP-240ENST00000592815 FADS3Q9Y5Q0 445 aa16.37■□□□□ 0.21
CIRBP-240ENST00000592815 NYNRINQ9P2P1 1898 aaKnown RBP16.37■□□□□ 0.21
CIRBP-240ENST00000592815 PTPRBP23467 1997 aa16.37■□□□□ 0.21
CIRBP-240ENST00000592815 CXorf51AA0A1B0GTR3 108 aa16.36■□□□□ 0.21
CIRBP-240ENST00000592815 ANKRD62A6NC57 917 aa16.36■□□□□ 0.21
CIRBP-240ENST00000592815 KRIT1O00522 736 aa16.36■□□□□ 0.21
CIRBP-240ENST00000592815 PAK4O96013 591 aaPredicted RBP16.36■□□□□ 0.21
CIRBP-240ENST00000592815 CKMT2P17540 419 aa16.36■□□□□ 0.21
CIRBP-240ENST00000592815 GSCP56915 257 aaPredicted RBP16.36■□□□□ 0.21
CIRBP-240ENST00000592815 GEMIN4P57678 1058 aaKnown RBP16.36■□□□□ 0.21
CIRBP-240ENST00000592815 C1QBPQ07021 282 aaKnown RBP16.36■□□□□ 0.21
CIRBP-240ENST00000592815 MYLK3Q32MK0 819 aa16.36■□□□□ 0.21
CIRBP-240ENST00000592815 DNAJC24Q6P3W2 148 aa16.36■□□□□ 0.21
CIRBP-240ENST00000592815 Q6ZSR6 202 aa16.36■□□□□ 0.21
CIRBP-240ENST00000592815 MON1BQ7L1V2 547 aa16.36■□□□□ 0.21
CIRBP-240ENST00000592815 APTXQ7Z2E3 356 aaKnown RBP16.36■□□□□ 0.21
CIRBP-240ENST00000592815 ZNF354CQ86Y25 554 aa16.36■□□□□ 0.21
CIRBP-240ENST00000592815 HSD3B7Q9H2F3 369 aa16.36■□□□□ 0.21
CIRBP-240ENST00000592815 NEU3Q9UQ49 428 aa16.36■□□□□ 0.21
CIRBP-240ENST00000592815 GPSM3Q9Y4H4 160 aa16.36■□□□□ 0.21
CIRBP-240ENST00000592815 HS3ST3A1Q9Y663 406 aa16.36■□□□□ 0.21
CIRBP-240ENST00000592815 DOCK9Q9BZ29 2069 aa16.36■□□□□ 0.21
CIRBP-240ENST00000592815 APC2O95996 2303 aa16.35■□□□□ 0.21
CIRBP-240ENST00000592815 C16orf96A6NNT2 1141 aa16.35■□□□□ 0.21
CIRBP-240ENST00000592815 TRIM38O00635 465 aa16.35■□□□□ 0.21
CIRBP-240ENST00000592815 CCP110O43303 1012 aa16.35■□□□□ 0.21
CIRBP-240ENST00000592815 BUB1O43683 1085 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms