RNA–Protein interactions for RNA: ENST00000589788.1

SDF2-208, Transcript of stromal cell derived factor 2, humanhuman

TSL 2

Gene SDF2, Length 1,342 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-208ENST00000589788 AP4E1Q9UPM8 1137 aa10.6□□□□□ -0.71
SDF2-208ENST00000589788 NCKAP1Q9Y2A7 1128 aa10.6□□□□□ -0.71
SDF2-208ENST00000589788 SSU72P8A0A1W2PR75 194 aa10.59□□□□□ -0.71
SDF2-208ENST00000589788 MEI4A8MW99 385 aa10.59□□□□□ -0.71
SDF2-208ENST00000589788 PRR5-ARHGAP8B1AHC4 643 aa10.59□□□□□ -0.71
SDF2-208ENST00000589788 EIF3CLB5ME19 914 aaKnown RBP10.59□□□□□ -0.71
SDF2-208ENST00000589788 AKR1B15C9JRZ8 316 aaPredicted RBP10.59□□□□□ -0.71
SDF2-208ENST00000589788 BNIP3LO60238 219 aa10.59□□□□□ -0.71
SDF2-208ENST00000589788 IGLV3-19P01714 112 aa10.59□□□□□ -0.71
SDF2-208ENST00000589788 CYP1A2P05177 515 aa10.59□□□□□ -0.71
SDF2-208ENST00000589788 ZNF806P0C7X5 589 aa10.59□□□□□ -0.71
SDF2-208ENST00000589788 VAV1P15498 845 aa10.59□□□□□ -0.71
SDF2-208ENST00000589788 TGM1P22735 817 aa10.59□□□□□ -0.71
SDF2-208ENST00000589788 PSMD8P48556 350 aa10.59□□□□□ -0.71
SDF2-208ENST00000589788 GALCP54803 685 aa10.59□□□□□ -0.71
SDF2-208ENST00000589788 TPI1P60174 286 aa10.59□□□□□ -0.71
SDF2-208ENST00000589788 ARHGAP8P85298 464 aa10.59□□□□□ -0.71
SDF2-208ENST00000589788 ZNF33AQ06730 810 aa10.59□□□□□ -0.71
SDF2-208ENST00000589788 ZNF252P-AS1Q0IIN9 211 aa10.59□□□□□ -0.71
SDF2-208ENST00000589788 PIGHQ14442 188 aaPredicted RBP10.59□□□□□ -0.71
SDF2-208ENST00000589788 ELAVL3Q14576 367 aaKnown RBP10.59□□□□□ -0.71
SDF2-208ENST00000589788 SF3A2Q15428 464 aaKnown RBP10.59□□□□□ -0.71
SDF2-208ENST00000589788 DLG2Q15700 870 aa10.59□□□□□ -0.71
SDF2-208ENST00000589788 CST6Q15828 149 aa10.59□□□□□ -0.71
SDF2-208ENST00000589788 SLC18A3Q16572 532 aa10.59□□□□□ -0.71
SDF2-208ENST00000589788 AASDHQ4L235 1098 aaPredicted RBP10.59□□□□□ -0.71
SDF2-208ENST00000589788 SYCP2LQ5T4T6 812 aa10.59□□□□□ -0.71
SDF2-208ENST00000589788 ARTNQ5T4W7 220 aa10.59□□□□□ -0.71
SDF2-208ENST00000589788 ERMARDQ5T6L9 678 aa10.59□□□□□ -0.71
SDF2-208ENST00000589788 RETSATQ6NUM9 610 aa10.59□□□□□ -0.71
SDF2-208ENST00000589788 LINGO4Q6UY18 593 aa10.59□□□□□ -0.71
SDF2-208ENST00000589788 NLRP14Q86W24 1093 aa10.59□□□□□ -0.71
SDF2-208ENST00000589788 ZNF354CQ86Y25 554 aa10.59□□□□□ -0.71
SDF2-208ENST00000589788 SYT12Q8IV01 421 aa10.59□□□□□ -0.71
SDF2-208ENST00000589788 MMAAQ8IVH4 418 aaKnown RBP10.59□□□□□ -0.71
SDF2-208ENST00000589788 TC2NQ8N9U0 490 aa10.59□□□□□ -0.71
SDF2-208ENST00000589788 OR8D1Q8WZ84 308 aa10.59□□□□□ -0.71
SDF2-208ENST00000589788 PTPRN2Q92932 1015 aa10.59□□□□□ -0.71
SDF2-208ENST00000589788 CCDC114Q96M63 670 aa10.59□□□□□ -0.71
SDF2-208ENST00000589788 CCDC42Q96M95 316 aa10.59□□□□□ -0.71
SDF2-208ENST00000589788 EIF3CQ99613 913 aaKnown RBP10.59□□□□□ -0.71
SDF2-208ENST00000589788 NUP85Q9BW27 656 aa10.59□□□□□ -0.71
SDF2-208ENST00000589788 GPR174Q9BXC1 333 aa10.59□□□□□ -0.71
SDF2-208ENST00000589788 MAGEH1Q9H213 219 aa10.59□□□□□ -0.71
SDF2-208ENST00000589788 PABPC3Q9H361 631 aaKnown RBP10.59□□□□□ -0.71
SDF2-208ENST00000589788 SMOC1Q9H4F8 434 aa10.59□□□□□ -0.71
SDF2-208ENST00000589788 DHX35Q9H5Z1 703 aaKnown RBP10.59□□□□□ -0.71
SDF2-208ENST00000589788 CATSPERBQ9H7T0 1116 aa10.59□□□□□ -0.71
SDF2-208ENST00000589788 GPATCH2LQ9NWQ4 482 aa10.59□□□□□ -0.71
SDF2-208ENST00000589788 DONSONQ9NYP3 566 aa10.59□□□□□ -0.71
SDF2-208ENST00000589788 WSB2Q9NYS7 404 aaPredicted RBP10.59□□□□□ -0.71
SDF2-208ENST00000589788 ZNF212Q9UDV6 495 aa10.59□□□□□ -0.71
SDF2-208ENST00000589788 IP6K2Q9UHH9 426 aa10.59□□□□□ -0.71
SDF2-208ENST00000589788 ANAPC7Q9UJX3 599 aa10.59□□□□□ -0.71
SDF2-208ENST00000589788 HS3ST2Q9Y278 367 aa10.59□□□□□ -0.71
SDF2-208ENST00000589788 DYNC1LI1Q9Y6G9 523 aaKnown RBP10.59□□□□□ -0.71
SDF2-208ENST00000589788 VPS13AQ96RL7 3174 aa10.59□□□□□ -0.71
SDF2-208ENST00000589788 ZNF292O60281 2723 aa10.59□□□□□ -0.71
SDF2-208ENST00000589788 TNRC6BQ9UPQ9 1833 aaKnown RBP10.59□□□□□ -0.71
SDF2-208ENST00000589788 GON4LQ3T8J9 2241 aa10.59□□□□□ -0.71
SDF2-208ENST00000589788 MYO1FO00160 1098 aa10.58□□□□□ -0.71
SDF2-208ENST00000589788 KHNYNO15037 678 aaKnown RBP10.58□□□□□ -0.71
SDF2-208ENST00000589788 MID1O15344 667 aa10.58□□□□□ -0.71
SDF2-208ENST00000589788 FGF10O15520 208 aaPredicted RBP10.58□□□□□ -0.71
SDF2-208ENST00000589788 DAPK3O43293 454 aa10.58□□□□□ -0.71
SDF2-208ENST00000589788 RAMP2O60895 175 aa10.58□□□□□ -0.71
SDF2-208ENST00000589788 MT-CO1P00395 513 aa10.58□□□□□ -0.71
SDF2-208ENST00000589788 IL1BP01584 269 aa10.58□□□□□ -0.71
SDF2-208ENST00000589788 PTMAP06454 111 aaKnown RBP10.58□□□□□ -0.71
SDF2-208ENST00000589788 H2AFZP0C0S5 128 aa10.58□□□□□ -0.71
SDF2-208ENST00000589788 SRCP12931 536 aa10.58□□□□□ -0.71
SDF2-208ENST00000589788 GLDCP23378 1020 aa10.58□□□□□ -0.71
SDF2-208ENST00000589788 MIPP30301 263 aa10.58□□□□□ -0.71
SDF2-208ENST00000589788 SLC8A1P32418 973 aa10.58□□□□□ -0.71
SDF2-208ENST00000589788 HTR7P34969 479 aa10.58□□□□□ -0.71
SDF2-208ENST00000589788 HOXD12P35452 270 aa10.58□□□□□ -0.71
SDF2-208ENST00000589788 DEKP35659 375 aaKnown RBP10.58□□□□□ -0.71
SDF2-208ENST00000589788 RECQLP46063 649 aaPredicted RBP10.58□□□□□ -0.71
SDF2-208ENST00000589788 SMCPP49901 116 aaPredicted RBP10.58□□□□□ -0.71
SDF2-208ENST00000589788 GEMIN4P57678 1058 aaKnown RBP10.58□□□□□ -0.71
SDF2-208ENST00000589788 SLC20A2Q08357 652 aa10.58□□□□□ -0.71
SDF2-208ENST00000589788 POLD3Q15054 466 aaPredicted RBP10.58□□□□□ -0.71
SDF2-208ENST00000589788 WDR45BQ5MNZ6 344 aa10.58□□□□□ -0.71
SDF2-208ENST00000589788 USP30Q70CQ3 517 aa10.58□□□□□ -0.71
SDF2-208ENST00000589788 H2AFVQ71UI9 128 aa10.58□□□□□ -0.71
SDF2-208ENST00000589788 RABEPKQ7Z6M1 372 aa10.58□□□□□ -0.71
SDF2-208ENST00000589788 PSTKQ8IV42 348 aaKnown RBP10.58□□□□□ -0.71
SDF2-208ENST00000589788 RGL4Q8IZJ4 473 aa10.58□□□□□ -0.71
SDF2-208ENST00000589788 ARFGAP1Q8N6T3 406 aa10.58□□□□□ -0.71
SDF2-208ENST00000589788 RTL3Q8N8U3 475 aaKnown RBP10.58□□□□□ -0.71
SDF2-208ENST00000589788 CADM4Q8NFZ8 388 aa10.58□□□□□ -0.71
SDF2-208ENST00000589788 FRS2Q8WU20 508 aa10.58□□□□□ -0.71
SDF2-208ENST00000589788 CTNNBL1Q8WYA6 563 aaPredicted RBP10.58□□□□□ -0.71
SDF2-208ENST00000589788 PANX2Q96RD6 677 aa10.58□□□□□ -0.71
SDF2-208ENST00000589788 PEBP4Q96S96 227 aa10.58□□□□□ -0.71
SDF2-208ENST00000589788 FAM129BQ96TA1 746 aa10.58□□□□□ -0.71
SDF2-208ENST00000589788 OMDQ99983 421 aa10.58□□□□□ -0.71
SDF2-208ENST00000589788 SNRNP25Q9BV90 132 aaKnown RBP10.58□□□□□ -0.71
SDF2-208ENST00000589788 RBCK1Q9BYM8 510 aa10.58□□□□□ -0.71
SDF2-208ENST00000589788 BTBD1Q9H0C5 482 aa10.58□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms