RNA–Protein interactions for RNA: ENST00000589758.1

MBD1-220, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 1 (best)

Gene MBD1, Length 385 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-220ENST00000589758 L1CAMP32004 1257 aa14.64□□□□□ -0.07
MBD1-220ENST00000589758 DNA2P51530 1060 aa14.64□□□□□ -0.07
MBD1-220ENST00000589758 NEK3P51956 506 aa14.64□□□□□ -0.07
MBD1-220ENST00000589758 FANCCQ00597 558 aa14.64□□□□□ -0.07
MBD1-220ENST00000589758 PTP4A2Q12974 167 aa14.64□□□□□ -0.07
MBD1-220ENST00000589758 BNIP3Q12983 259 aa14.64□□□□□ -0.07
MBD1-220ENST00000589758 CLEC16AQ2KHT3 1053 aa14.64□□□□□ -0.07
MBD1-220ENST00000589758 ZNF284Q2VY69 593 aa14.64□□□□□ -0.07
MBD1-220ENST00000589758 SFMBT2Q5VUG0 894 aa14.64□□□□□ -0.07
MBD1-220ENST00000589758 RWDD4Q6NW29 188 aaKnown RBP14.64□□□□□ -0.07
MBD1-220ENST00000589758 DHRS13Q6UX07 377 aa14.64□□□□□ -0.07
MBD1-220ENST00000589758 KANSL1Q7Z3B3 1105 aa14.64□□□□□ -0.07
MBD1-220ENST00000589758 TMPRSS12Q86WS5 348 aa14.64□□□□□ -0.07
MBD1-220ENST00000589758 TMEM145Q8NBT3 493 aa14.64□□□□□ -0.07
MBD1-220ENST00000589758 RNF214Q8ND24 703 aa14.64□□□□□ -0.07
MBD1-220ENST00000589758 C3orf20Q8ND61 904 aa14.64□□□□□ -0.07
MBD1-220ENST00000589758 NTAN1Q96AB6 310 aa14.64□□□□□ -0.07
MBD1-220ENST00000589758 PCDHB18PQ96TA0 734 aa14.64□□□□□ -0.07
MBD1-220ENST00000589758 MAGEH1Q9H213 219 aa14.64□□□□□ -0.07
MBD1-220ENST00000589758 TMEM248Q9NWD8 314 aa14.64□□□□□ -0.07
MBD1-220ENST00000589758 WASF2Q9Y6W5 498 aa14.64□□□□□ -0.07
MBD1-220ENST00000589758 CFAP47Q6ZTR5 3102 aa14.64□□□□□ -0.07
MBD1-220ENST00000589758 A0A1B0GTH6 734 aa14.63□□□□□ -0.07
MBD1-220ENST00000589758 ANKRD62A6NC57 917 aa14.63□□□□□ -0.07
MBD1-220ENST00000589758 SIGLEC16A6NMB1 481 aa14.63□□□□□ -0.07
MBD1-220ENST00000589758 RFPL3O75679 317 aa14.63□□□□□ -0.07
MBD1-220ENST00000589758 LRIG2O94898 1065 aa14.63□□□□□ -0.07
MBD1-220ENST00000589758 THEGLP0DJG4 465 aa14.63□□□□□ -0.07
MBD1-220ENST00000589758 GPD1P21695 349 aa14.63□□□□□ -0.07
MBD1-220ENST00000589758 RFC1P35251 1148 aaPredicted RBP14.63□□□□□ -0.07
MBD1-220ENST00000589758 HDAC4P56524 1084 aa14.63□□□□□ -0.07
MBD1-220ENST00000589758 ILKQ13418 452 aa14.63□□□□□ -0.07
MBD1-220ENST00000589758 HS1BP3Q53T59 392 aa14.63□□□□□ -0.07
MBD1-220ENST00000589758 KIAA1161Q6NSJ0 714 aa14.63□□□□□ -0.07
MBD1-220ENST00000589758 FBXL19Q6PCT2 694 aa14.63□□□□□ -0.07
MBD1-220ENST00000589758 WDR59Q6PJI9 974 aa14.63□□□□□ -0.07
MBD1-220ENST00000589758 NLRP14Q86W24 1093 aa14.63□□□□□ -0.07
MBD1-220ENST00000589758 PDCD7Q8N8D1 485 aaKnown RBP14.63□□□□□ -0.07
MBD1-220ENST00000589758 FAM172AQ8WUF8 416 aa14.63□□□□□ -0.07
MBD1-220ENST00000589758 TSC1Q92574 1164 aa14.63□□□□□ -0.07
MBD1-220ENST00000589758 KLK6Q92876 244 aa14.63□□□□□ -0.07
MBD1-220ENST00000589758 ARHGEF2Q92974 986 aaKnown RBP14.63□□□□□ -0.07
MBD1-220ENST00000589758 TBC1D31Q96DN5 1066 aa14.63□□□□□ -0.07
MBD1-220ENST00000589758 LRIG1Q96JA1 1093 aa14.63□□□□□ -0.07
MBD1-220ENST00000589758 FEM1CQ96JP0 617 aa14.63□□□□□ -0.07
MBD1-220ENST00000589758 SEPT11Q9NVA2 429 aaKnown RBP14.63□□□□□ -0.07
MBD1-220ENST00000589758 HECAQ9UBI9 543 aaPredicted RBP14.63□□□□□ -0.07
MBD1-220ENST00000589758 FCF1Q9Y324 198 aaKnown RBP14.63□□□□□ -0.07
MBD1-220ENST00000589758 TRABD2BA6NFA1 517 aa14.62□□□□□ -0.07
MBD1-220ENST00000589758 FAM72CH0Y354 149 aa14.62□□□□□ -0.07
MBD1-220ENST00000589758 AP1G1O43747 822 aa14.62□□□□□ -0.07
MBD1-220ENST00000589758 RAMP2O60895 175 aa14.62□□□□□ -0.07
MBD1-220ENST00000589758 PLEKP08567 350 aaPredicted RBP14.62□□□□□ -0.07
MBD1-220ENST00000589758 ADRB3P13945 408 aa14.62□□□□□ -0.07
MBD1-220ENST00000589758 PRLRP16471 622 aa14.62□□□□□ -0.07
MBD1-220ENST00000589758 CKMT2P17540 419 aa14.62□□□□□ -0.07
MBD1-220ENST00000589758 HNF1BP35680 557 aa14.62□□□□□ -0.07
MBD1-220ENST00000589758 ACVRL1P37023 503 aa14.62□□□□□ -0.07
MBD1-220ENST00000589758 ACADVLP49748 655 aa14.62□□□□□ -0.07
MBD1-220ENST00000589758 CCNHP51946 323 aaPredicted RBP14.62□□□□□ -0.07
MBD1-220ENST00000589758 AIF1P55008 147 aa14.62□□□□□ -0.07
MBD1-220ENST00000589758 UBASH3AP57075 661 aa14.62□□□□□ -0.07
MBD1-220ENST00000589758 SNRPD1P62314 119 aaKnown RBP14.62□□□□□ -0.07
MBD1-220ENST00000589758 RPS21P63220 83 aaKnown RBP14.62□□□□□ -0.07
MBD1-220ENST00000589758 C1QBPQ07021 282 aaKnown RBP14.62□□□□□ -0.07
MBD1-220ENST00000589758 CAMK2BQ13554 666 aa14.62□□□□□ -0.07
MBD1-220ENST00000589758 POLD3Q15054 466 aaPredicted RBP14.62□□□□□ -0.07
MBD1-220ENST00000589758 RAB6CQ53S08 254 aa14.62□□□□□ -0.07
MBD1-220ENST00000589758 FAM72AQ5TYM5 149 aa14.62□□□□□ -0.07
MBD1-220ENST00000589758 FAM72DQ6L9T8 149 aa14.62□□□□□ -0.07
MBD1-220ENST00000589758 SLFN11Q7Z7L1 901 aa14.62□□□□□ -0.07
MBD1-220ENST00000589758 FAM72BQ86X60 149 aa14.62□□□□□ -0.07
MBD1-220ENST00000589758 DCP2Q8IU60 420 aaKnown RBP14.62□□□□□ -0.07
MBD1-220ENST00000589758 MDM1Q8TC05 714 aa14.62□□□□□ -0.07
MBD1-220ENST00000589758 IFT43Q96FT9 208 aa14.62□□□□□ -0.07
MBD1-220ENST00000589758 AGPAT1Q99943 283 aa14.62□□□□□ -0.07
MBD1-220ENST00000589758 RAB6CQ9H0N0 254 aa14.62□□□□□ -0.07
MBD1-220ENST00000589758 NDFIP2Q9NV92 336 aa14.62□□□□□ -0.07
MBD1-220ENST00000589758 KLHL11Q9NVR0 708 aa14.62□□□□□ -0.07
MBD1-220ENST00000589758 DNAI1Q9UI46 699 aa14.62□□□□□ -0.07
MBD1-220ENST00000589758 ZFR2Q9UPR6 939 aaKnown RBP14.62□□□□□ -0.07
MBD1-220ENST00000589758 CA5BQ9Y2D0 317 aa14.62□□□□□ -0.07
MBD1-220ENST00000589758 FADS3Q9Y5Q0 445 aa14.62□□□□□ -0.07
MBD1-220ENST00000589758 HS3ST3A1Q9Y663 406 aa14.62□□□□□ -0.07
MBD1-220ENST00000589758 ASPMQ8IZT6 3477 aa14.62□□□□□ -0.07
MBD1-220ENST00000589758 FRYQ5TBA9 3013 aa14.62□□□□□ -0.07
MBD1-220ENST00000589758 CHD6Q8TD26 2715 aa14.61□□□□□ -0.07
MBD1-220ENST00000589758 DOCK9Q9BZ29 2069 aa14.61□□□□□ -0.07
MBD1-220ENST00000589758 ZSCAN5CA6NGD5 496 aaPredicted RBP14.61□□□□□ -0.07
MBD1-220ENST00000589758 RNF103O00237 685 aa14.61□□□□□ -0.07
MBD1-220ENST00000589758 KDELR3O43731 214 aa14.61□□□□□ -0.07
MBD1-220ENST00000589758 GJB6O95452 261 aa14.61□□□□□ -0.07
MBD1-220ENST00000589758 CD160O95971 181 aa14.61□□□□□ -0.07
MBD1-220ENST00000589758 GSRP00390 522 aa14.61□□□□□ -0.07
MBD1-220ENST00000589758 JUPP14923 745 aa14.61□□□□□ -0.07
MBD1-220ENST00000589758 FERP16591 822 aa14.61□□□□□ -0.07
MBD1-220ENST00000589758 DESP17661 470 aa14.61□□□□□ -0.07
MBD1-220ENST00000589758 DNAJC3Q13217 504 aa14.61□□□□□ -0.07
MBD1-220ENST00000589758 NR1I3Q14994 352 aa14.61□□□□□ -0.07
MBD1-220ENST00000589758 TMEM259Q4ZIN3 620 aa14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms