RNA–Protein interactions for RNA: ENST00000589577.1

VPS25-204, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 5

Gene VPS25, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-204ENST00000589577 SYCP3Q8IZU3 236 aa6.25□□□□□ -1.41
VPS25-204ENST00000589577 MMP21Q8N119 569 aa6.25□□□□□ -1.41
VPS25-204ENST00000589577 SLC34A3Q8N130 599 aa6.25□□□□□ -1.41
VPS25-204ENST00000589577 IL22RA1Q8N6P7 574 aa6.25□□□□□ -1.41
VPS25-204ENST00000589577 EFCAB3Q8N7B9 438 aa6.25□□□□□ -1.41
VPS25-204ENST00000589577 GPT2Q8TD30 523 aa6.25□□□□□ -1.41
VPS25-204ENST00000589577 PLEKHO2Q8TD55 490 aa6.25□□□□□ -1.41
VPS25-204ENST00000589577 GPBAR1Q8TDU6 330 aa6.25□□□□□ -1.41
VPS25-204ENST00000589577 NDRG1Q92597 394 aaKnown RBP6.25□□□□□ -1.41
VPS25-204ENST00000589577 TMEM159Q96B96 161 aa6.25□□□□□ -1.41
VPS25-204ENST00000589577 HEXIM2Q96MH2 286 aaKnown RBP6.25□□□□□ -1.41
VPS25-204ENST00000589577 KLF6Q99612 283 aaPredicted RBP6.25□□□□□ -1.41
VPS25-204ENST00000589577 TSG101Q99816 390 aa6.25□□□□□ -1.41
VPS25-204ENST00000589577 CDH19Q9H159 772 aa6.25□□□□□ -1.41
VPS25-204ENST00000589577 BLZF1Q9H2G9 400 aa6.25□□□□□ -1.41
VPS25-204ENST00000589577 SEMA6CQ9H3T2 930 aa6.25□□□□□ -1.41
VPS25-204ENST00000589577 LRRN3Q9H3W5 708 aa6.25□□□□□ -1.41
VPS25-204ENST00000589577 OLFML3Q9NRN5 406 aa6.25□□□□□ -1.41
VPS25-204ENST00000589577 STIM2Q9P246 746 aa6.25□□□□□ -1.41
VPS25-204ENST00000589577 KIAA1468Q9P260 1216 aa6.25□□□□□ -1.41
VPS25-204ENST00000589577 APOBEC3BQ9UH17 382 aaKnown RBP6.25□□□□□ -1.41
VPS25-204ENST00000589577 SFMBT1Q9UHJ3 866 aa6.25□□□□□ -1.41
VPS25-204ENST00000589577 KCNMB2Q9Y691 235 aa6.25□□□□□ -1.41
VPS25-204ENST00000589577 ARHGEF17Q96PE2 2063 aaPredicted RBP6.25□□□□□ -1.41
VPS25-204ENST00000589577 CHD5Q8TDI0 1954 aa6.24□□□□□ -1.41
VPS25-204ENST00000589577 ARHGAP10A1A4S6 786 aa6.24□□□□□ -1.41
VPS25-204ENST00000589577 BICDL2A1A5D9 508 aa6.24□□□□□ -1.41
VPS25-204ENST00000589577 HNRNPRO43390 633 aaKnown RBP6.24□□□□□ -1.41
VPS25-204ENST00000589577 VNN1O95497 513 aa6.24□□□□□ -1.41
VPS25-204ENST00000589577 FGFR1OPO95684 399 aaKnown RBP6.24□□□□□ -1.41
VPS25-204ENST00000589577 FGF3P11487 239 aaPredicted RBP6.24□□□□□ -1.41
VPS25-204ENST00000589577 TSHRP16473 764 aa6.24□□□□□ -1.41
VPS25-204ENST00000589577 TNNI1P19237 187 aa6.24□□□□□ -1.41
VPS25-204ENST00000589577 NOS2P35228 1153 aa6.24□□□□□ -1.41
VPS25-204ENST00000589577 ASPAP45381 313 aa6.24□□□□□ -1.41
VPS25-204ENST00000589577 CASP4P49662 377 aa6.24□□□□□ -1.41
VPS25-204ENST00000589577 CYP24A1Q07973 514 aa6.24□□□□□ -1.41
VPS25-204ENST00000589577 CUL4BQ13620 913 aa6.24□□□□□ -1.41
VPS25-204ENST00000589577 SNRNP35Q16560 246 aaKnown RBP6.24□□□□□ -1.41
VPS25-204ENST00000589577 ZNF699Q32M78 642 aa6.24□□□□□ -1.41
VPS25-204ENST00000589577 ZNF667Q5HYK9 610 aa6.24□□□□□ -1.41
VPS25-204ENST00000589577 EFHC2Q5JST6 749 aa6.24□□□□□ -1.41
VPS25-204ENST00000589577 RAB41Q5JT25 222 aa6.24□□□□□ -1.41
VPS25-204ENST00000589577 NEK5Q6P3R8 708 aa6.24□□□□□ -1.41
VPS25-204ENST00000589577 ASB18Q6ZVZ8 466 aa6.24□□□□□ -1.41
VPS25-204ENST00000589577 XYLT1Q86Y38 959 aa6.24□□□□□ -1.41
VPS25-204ENST00000589577 CCNJLQ8IV13 435 aa6.24□□□□□ -1.41
VPS25-204ENST00000589577 MCEMP1Q8IX19 187 aa6.24□□□□□ -1.41
VPS25-204ENST00000589577 GRAMD1CQ8IYS0 662 aa6.24□□□□□ -1.41
VPS25-204ENST00000589577 PHACTR4Q8IZ21 702 aa6.24□□□□□ -1.41
VPS25-204ENST00000589577 CACNA2D3Q8IZS8 1091 aa6.24□□□□□ -1.41
VPS25-204ENST00000589577 CARNMT1Q8N4J0 409 aa6.24□□□□□ -1.41
VPS25-204ENST00000589577 ARL10Q8N8L6 244 aa6.24□□□□□ -1.41
VPS25-204ENST00000589577 PCDH19Q8TAB3 1148 aa6.24□□□□□ -1.41
VPS25-204ENST00000589577 PRR7Q8TB68 274 aa6.24□□□□□ -1.41
VPS25-204ENST00000589577 GOLGA5Q8TBA6 731 aa6.24□□□□□ -1.41
VPS25-204ENST00000589577 NANOS1Q8WY41 292 aaKnown RBP6.24□□□□□ -1.41
VPS25-204ENST00000589577 GLMNQ92990 594 aa6.24□□□□□ -1.41
VPS25-204ENST00000589577 CCDC127Q96BQ5 260 aa6.24□□□□□ -1.41
VPS25-204ENST00000589577 CYFIP2Q96F07 1278 aa6.24□□□□□ -1.41
VPS25-204ENST00000589577 CMKLR1Q99788 373 aa6.24□□□□□ -1.41
VPS25-204ENST00000589577 SIRPGQ9P1W8 387 aa6.24□□□□□ -1.41
VPS25-204ENST00000589577 SPASTQ9UBP0 616 aa6.24□□□□□ -1.41
VPS25-204ENST00000589577 HBS1LQ9Y450 684 aaKnown RBP6.24□□□□□ -1.41
VPS25-204ENST00000589577 PCDHGA3Q9Y5H0 932 aa6.24□□□□□ -1.41
VPS25-204ENST00000589577 RNF215Q9Y6U7 377 aa6.24□□□□□ -1.41
VPS25-204ENST00000589577 ANKRD36A6QL64 1941 aa6.23□□□□□ -1.41
VPS25-204ENST00000589577 POLEQ07864 2286 aa6.23□□□□□ -1.41
VPS25-204ENST00000589577 LOC101059948A0A1B0GTJ6 334 aa6.23□□□□□ -1.41
VPS25-204ENST00000589577 FRMD3A2A2Y4 597 aa6.23□□□□□ -1.41
VPS25-204ENST00000589577 BECN2A8MW95 431 aa6.23□□□□□ -1.41
VPS25-204ENST00000589577 BIN1O00499 593 aa6.23□□□□□ -1.41
VPS25-204ENST00000589577 MCF2LO15068 1137 aa6.23□□□□□ -1.41
VPS25-204ENST00000589577 KIAA0391O15091 583 aaKnown RBP6.23□□□□□ -1.41
VPS25-204ENST00000589577 EIF3DO15371 548 aaKnown RBP eCLIP6.23□□□□□ -1.41
VPS25-204ENST00000589577 IRAK2O43187 625 aa6.23□□□□□ -1.41
VPS25-204ENST00000589577 RHOBTB3O94955 611 aa6.23□□□□□ -1.41
VPS25-204ENST00000589577 LUC7L3O95232 432 aaKnown RBP6.23□□□□□ -1.41
VPS25-204ENST00000589577 TPM2P07951 284 aa6.23□□□□□ -1.41
VPS25-204ENST00000589577 ANXA6P08133 673 aa6.23□□□□□ -1.41
VPS25-204ENST00000589577 RECQLP46063 649 aaPredicted RBP6.23□□□□□ -1.41
VPS25-204ENST00000589577 RABIFP47224 123 aa6.23□□□□□ -1.41
VPS25-204ENST00000589577 PFN3P60673 137 aa6.23□□□□□ -1.41
VPS25-204ENST00000589577 INCA1Q0VD86 236 aa6.23□□□□□ -1.41
VPS25-204ENST00000589577 DPYDQ12882 1025 aa6.23□□□□□ -1.41
VPS25-204ENST00000589577 TRPC3Q13507 836 aa6.23□□□□□ -1.41
VPS25-204ENST00000589577 CDH18Q13634 790 aa6.23□□□□□ -1.41
VPS25-204ENST00000589577 PTK2BQ14289 1009 aa6.23□□□□□ -1.41
VPS25-204ENST00000589577 KMT5BQ4FZB7 885 aa6.23□□□□□ -1.41
VPS25-204ENST00000589577 NADK2Q4G0N4 442 aa6.23□□□□□ -1.41
VPS25-204ENST00000589577 CT47A1Q5JQC4 288 aaPredicted RBP6.23□□□□□ -1.41
VPS25-204ENST00000589577 PPP1R26Q5T8A7 1209 aaPredicted RBP6.23□□□□□ -1.41
VPS25-204ENST00000589577 ZNF658Q5TYW1 1059 aaPredicted RBP6.23□□□□□ -1.41
VPS25-204ENST00000589577 FAM46CQ5VWP2 391 aa6.23□□□□□ -1.41
VPS25-204ENST00000589577 PM20D1Q6GTS8 502 aa6.23□□□□□ -1.41
VPS25-204ENST00000589577 SPOPLQ6IQ16 392 aa6.23□□□□□ -1.41
VPS25-204ENST00000589577 ESRP1Q6NXG1 681 aaKnown RBP6.23□□□□□ -1.41
VPS25-204ENST00000589577 NYAP1Q6ZVC0 841 aa6.23□□□□□ -1.41
VPS25-204ENST00000589577 Q6ZVU0 165 aa6.23□□□□□ -1.41
VPS25-204ENST00000589577 SPRED1Q7Z699 444 aa6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms