RNA–Protein interactions for RNA: ENST00000589118.5

SF3A2-204, Transcript of splicing factor 3a subunit 2, humanhuman

TSL 2

Gene SF3A2, Length 759 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A2-204ENST00000589118 IFT43Q96FT9 208 aa15.41■□□□□ 0.06
SF3A2-204ENST00000589118 IL12RB2Q99665 862 aa15.41■□□□□ 0.06
SF3A2-204ENST00000589118 CCDC3Q9BQI4 270 aa15.41■□□□□ 0.06
SF3A2-204ENST00000589118 GTPBP4Q9BZE4 634 aaKnown RBP15.41■□□□□ 0.06
SF3A2-204ENST00000589118 FOXP3Q9BZS1 431 aa15.41■□□□□ 0.06
SF3A2-204ENST00000589118 MPP6Q9NZW5 540 aa15.41■□□□□ 0.06
SF3A2-204ENST00000589118 TBC1D30Q9Y2I9 924 aa15.41■□□□□ 0.06
SF3A2-204ENST00000589118 PCDHGA8Q9Y5G5 932 aa15.41■□□□□ 0.06
SF3A2-204ENST00000589118 FADS3Q9Y5Q0 445 aa15.41■□□□□ 0.06
SF3A2-204ENST00000589118 SCN8AQ9UQD0 1980 aa15.4■□□□□ 0.06
SF3A2-204ENST00000589118 UBR5O95071 2799 aaPredicted RBP15.4■□□□□ 0.06
SF3A2-204ENST00000589118 DOPEY2Q9Y3R5 2298 aa15.4■□□□□ 0.06
SF3A2-204ENST00000589118 TERTO14746 1132 aaKnown RBP15.4■□□□□ 0.06
SF3A2-204ENST00000589118 THAP12O43422 761 aa15.4■□□□□ 0.06
SF3A2-204ENST00000589118 ADCY5O95622 1261 aa15.4■□□□□ 0.06
SF3A2-204ENST00000589118 RHOCP08134 193 aa15.4■□□□□ 0.06
SF3A2-204ENST00000589118 ITGB6P18564 788 aa15.4■□□□□ 0.06
SF3A2-204ENST00000589118 DNA2P51530 1060 aa15.4■□□□□ 0.06
SF3A2-204ENST00000589118 CDK17Q00537 523 aa15.4■□□□□ 0.06
SF3A2-204ENST00000589118 APBA1Q02410 837 aa15.4■□□□□ 0.06
SF3A2-204ENST00000589118 OTUD1Q5VV17 481 aaPredicted RBP15.4■□□□□ 0.06
SF3A2-204ENST00000589118 C22orf39Q6P5X5 142 aa15.4■□□□□ 0.06
SF3A2-204ENST00000589118 KYAT3Q6YP21 454 aaKnown RBP15.4■□□□□ 0.06
SF3A2-204ENST00000589118 USP53Q70EK8 1073 aa15.4■□□□□ 0.06
SF3A2-204ENST00000589118 TFAP2DQ7Z6R9 452 aa15.4■□□□□ 0.06
SF3A2-204ENST00000589118 CLEC14AQ86T13 490 aa15.4■□□□□ 0.06
SF3A2-204ENST00000589118 PARGQ86W56 976 aa15.4■□□□□ 0.06
SF3A2-204ENST00000589118 PASD1Q8IV76 773 aa15.4■□□□□ 0.06
SF3A2-204ENST00000589118 ARL14Q8N4G2 192 aa15.4■□□□□ 0.06
SF3A2-204ENST00000589118 ZNF606Q8WXB4 792 aa15.4■□□□□ 0.06
SF3A2-204ENST00000589118 SLC2A13Q96QE2 648 aa15.4■□□□□ 0.06
SF3A2-204ENST00000589118 CPXM1Q96SM3 734 aa15.4■□□□□ 0.06
SF3A2-204ENST00000589118 HDAC8Q9BY41 377 aa15.4■□□□□ 0.06
SF3A2-204ENST00000589118 CLPBQ9H078 707 aa15.4■□□□□ 0.06
SF3A2-204ENST00000589118 USP29Q9HBJ7 922 aa15.4■□□□□ 0.06
SF3A2-204ENST00000589118 EPB41L5Q9HCM4 733 aa15.4■□□□□ 0.06
SF3A2-204ENST00000589118 GULP1Q9UBP9 304 aa15.4■□□□□ 0.06
SF3A2-204ENST00000589118 SALL4Q9UJQ4 1053 aa15.4■□□□□ 0.06
SF3A2-204ENST00000589118 FARP1Q9Y4F1 1045 aaPredicted RBP15.4■□□□□ 0.06
SF3A2-204ENST00000589118 ZFC3H1O60293 1989 aaKnown RBP15.39■□□□□ 0.05
SF3A2-204ENST00000589118 CCDC187A0A096LP49 1063 aa15.39■□□□□ 0.05
SF3A2-204ENST00000589118 CLDN11O75508 207 aa15.39■□□□□ 0.05
SF3A2-204ENST00000589118 PRNPP04156 253 aa15.39■□□□□ 0.05
SF3A2-204ENST00000589118 ADRB3P13945 408 aa15.39■□□□□ 0.05
SF3A2-204ENST00000589118 CD44P16070 742 aaKnown RBP15.39■□□□□ 0.05
SF3A2-204ENST00000589118 WT1P19544 449 aaPredicted RBP15.39■□□□□ 0.05
SF3A2-204ENST00000589118 ITIH2P19823 946 aa15.39■□□□□ 0.05
SF3A2-204ENST00000589118 ABL2P42684 1182 aa15.39■□□□□ 0.05
SF3A2-204ENST00000589118 OXCT1P55809 520 aa15.39■□□□□ 0.05
SF3A2-204ENST00000589118 KRT83P78385 493 aa15.39■□□□□ 0.05
SF3A2-204ENST00000589118 PDCLQ13371 301 aa15.39■□□□□ 0.05
SF3A2-204ENST00000589118 CCDC40Q4G0X9 1142 aa15.39■□□□□ 0.05
SF3A2-204ENST00000589118 PRRT3Q5FWE3 981 aa15.39■□□□□ 0.05
SF3A2-204ENST00000589118 LRRC73Q5JTD7 316 aa15.39■□□□□ 0.05
SF3A2-204ENST00000589118 ZNF658Q5TYW1 1059 aaPredicted RBP15.39■□□□□ 0.05
SF3A2-204ENST00000589118 FAM183BPQ6ZVS7 135 aa15.39■□□□□ 0.05
SF3A2-204ENST00000589118 PARS2Q7L3T8 475 aaKnown RBP15.39■□□□□ 0.05
SF3A2-204ENST00000589118 VASH2Q86V25 355 aa15.39■□□□□ 0.05
SF3A2-204ENST00000589118 OR6K2Q8NGY2 324 aa15.39■□□□□ 0.05
SF3A2-204ENST00000589118 CCDC97Q96F63 343 aaPredicted RBP15.39■□□□□ 0.05
SF3A2-204ENST00000589118 FEM1CQ96JP0 617 aa15.39■□□□□ 0.05
SF3A2-204ENST00000589118 MED15Q96RN5 788 aa15.39■□□□□ 0.05
SF3A2-204ENST00000589118 SPON2Q9BUD6 331 aa15.39■□□□□ 0.05
SF3A2-204ENST00000589118 BOCQ9BWV1 1114 aa15.39■□□□□ 0.05
SF3A2-204ENST00000589118 SIRPGQ9P1W8 387 aa15.39■□□□□ 0.05
SF3A2-204ENST00000589118 FCF1Q9Y324 198 aaKnown RBP15.39■□□□□ 0.05
SF3A2-204ENST00000589118 CSNK1G3Q9Y6M4 447 aa15.39■□□□□ 0.05
SF3A2-204ENST00000589118 BOD1L1Q8NFC6 3051 aa15.39■□□□□ 0.05
SF3A2-204ENST00000589118 COL12A1Q99715 3063 aa15.39■□□□□ 0.05
SF3A2-204ENST00000589118 DOCK4Q8N1I0 1966 aa15.38■□□□□ 0.05
SF3A2-204ENST00000589118 H3BM21 787 aa15.38■□□□□ 0.05
SF3A2-204ENST00000589118 M0QYT0 321 aa15.38■□□□□ 0.05
SF3A2-204ENST00000589118 FPGTO14772 594 aa15.38■□□□□ 0.05
SF3A2-204ENST00000589118 YY2O15391 372 aa15.38■□□□□ 0.05
SF3A2-204ENST00000589118 UGT1A5P35504 534 aa15.38■□□□□ 0.05
SF3A2-204ENST00000589118 NEK3P51956 506 aa15.38■□□□□ 0.05
SF3A2-204ENST00000589118 CDH4P55283 916 aa15.38■□□□□ 0.05
SF3A2-204ENST00000589118 RPS21P63220 83 aaKnown RBP15.38■□□□□ 0.05
SF3A2-204ENST00000589118 SPIDRQ14159 915 aa15.38■□□□□ 0.05
SF3A2-204ENST00000589118 DCP2Q8IU60 420 aaKnown RBP15.38■□□□□ 0.05
SF3A2-204ENST00000589118 ZNF683Q8IZ20 524 aa15.38■□□□□ 0.05
SF3A2-204ENST00000589118 STK32AQ8WU08 396 aa15.38■□□□□ 0.05
SF3A2-204ENST00000589118 PPP1R9BQ96SB3 815 aa15.38■□□□□ 0.05
SF3A2-204ENST00000589118 ARHGAP9Q9BRR9 750 aa15.38■□□□□ 0.05
SF3A2-204ENST00000589118 LRRC61Q9BV99 259 aa15.38■□□□□ 0.05
SF3A2-204ENST00000589118 UBE2TQ9NPD8 197 aaPredicted RBP15.38■□□□□ 0.05
SF3A2-204ENST00000589118 PIGVQ9NUD9 493 aa15.38■□□□□ 0.05
SF3A2-204ENST00000589118 EVA1BQ9NVM1 165 aa15.38■□□□□ 0.05
SF3A2-204ENST00000589118 ATXN7L1Q9ULK2 861 aaPredicted RBP15.38■□□□□ 0.05
SF3A2-204ENST00000589118 PADI4Q9UM07 663 aa15.38■□□□□ 0.05
SF3A2-204ENST00000589118 CNTN6Q9UQ52 1028 aa15.38■□□□□ 0.05
SF3A2-204ENST00000589118 SUV39H1O43463 412 aa15.37■□□□□ 0.05
SF3A2-204ENST00000589118 GJB6O95452 261 aa15.37■□□□□ 0.05
SF3A2-204ENST00000589118 SLC2A3P11169 496 aa15.37■□□□□ 0.05
SF3A2-204ENST00000589118 TSHRP16473 764 aa15.37■□□□□ 0.05
SF3A2-204ENST00000589118 ITIH1P19827 911 aa15.37■□□□□ 0.05
SF3A2-204ENST00000589118 GNA15P30679 374 aa15.37■□□□□ 0.05
SF3A2-204ENST00000589118 L1CAMP32004 1257 aa15.37■□□□□ 0.05
SF3A2-204ENST00000589118 RABIFP47224 123 aa15.37■□□□□ 0.05
SF3A2-204ENST00000589118 PFN3P60673 137 aa15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms