RNA–Protein interactions for RNA: ENST00000589078.1

APOC1-204, Transcript of apolipoprotein C1, humanhuman

TSL 2

Gene APOC1, Length 213 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-204ENST00000589078 NAP1L1P55209 391 aaKnown RBP9.86□□□□□ -0.83
APOC1-204ENST00000589078 DPYSQ14117 519 aa9.86□□□□□ -0.83
APOC1-204ENST00000589078 CST6Q15828 149 aa9.86□□□□□ -0.83
APOC1-204ENST00000589078 IFI16Q16666 785 aaKnown RBP9.86□□□□□ -0.83
APOC1-204ENST00000589078 LRRC38Q5VT99 294 aa9.86□□□□□ -0.83
APOC1-204ENST00000589078 PMS2CLQ68D20 193 aa9.86□□□□□ -0.83
APOC1-204ENST00000589078 C22orf39Q6P5X5 142 aa9.86□□□□□ -0.83
APOC1-204ENST00000589078 LINGO4Q6UY18 593 aa9.86□□□□□ -0.83
APOC1-204ENST00000589078 Q6ZVU0 165 aa9.86□□□□□ -0.83
APOC1-204ENST00000589078 USP30Q70CQ3 517 aa9.86□□□□□ -0.83
APOC1-204ENST00000589078 CYP2U1Q7Z449 544 aa9.86□□□□□ -0.83
APOC1-204ENST00000589078 MMAAQ8IVH4 418 aaKnown RBP9.86□□□□□ -0.83
APOC1-204ENST00000589078 STK40Q8N2I9 435 aa9.86□□□□□ -0.83
APOC1-204ENST00000589078 FRS2Q8WU20 508 aa9.86□□□□□ -0.83
APOC1-204ENST00000589078 ISG20Q96AZ6 181 aaKnown RBP9.86□□□□□ -0.83
APOC1-204ENST00000589078 HMCESQ96FZ2 354 aa9.86□□□□□ -0.83
APOC1-204ENST00000589078 CSPG4P5Q96PW8 444 aa9.86□□□□□ -0.83
APOC1-204ENST00000589078 OMDQ99983 421 aa9.86□□□□□ -0.83
APOC1-204ENST00000589078 ZNF670Q9BS34 389 aa9.86□□□□□ -0.83
APOC1-204ENST00000589078 CALN1Q9BXU9 219 aa9.86□□□□□ -0.83
APOC1-204ENST00000589078 SLC6A17Q9H1V8 727 aa9.86□□□□□ -0.83
APOC1-204ENST00000589078 PABPC3Q9H361 631 aaKnown RBP9.86□□□□□ -0.83
APOC1-204ENST00000589078 PCDH18Q9HCL0 1135 aa9.86□□□□□ -0.83
APOC1-204ENST00000589078 DYRK4Q9NR20 520 aa9.86□□□□□ -0.83
APOC1-204ENST00000589078 NDFIP2Q9NV92 336 aa9.86□□□□□ -0.83
APOC1-204ENST00000589078 CWC15Q9P013 229 aaKnown RBP9.86□□□□□ -0.83
APOC1-204ENST00000589078 MSRB2Q9Y3D2 182 aa9.86□□□□□ -0.83
APOC1-204ENST00000589078 ABCA7Q8IZY2 2146 aa9.86□□□□□ -0.83
APOC1-204ENST00000589078 CACNA1EQ15878 2313 aa9.85□□□□□ -0.83
APOC1-204ENST00000589078 SPAARA0A1B0GVQ0 90 aa9.85□□□□□ -0.83
APOC1-204ENST00000589078 DFFAO00273 331 aa9.85□□□□□ -0.83
APOC1-204ENST00000589078 MCF2LO15068 1137 aa9.85□□□□□ -0.83
APOC1-204ENST00000589078 RNASEH2AO75792 299 aaKnown RBP9.85□□□□□ -0.83
APOC1-204ENST00000589078 ZMPSTE24O75844 475 aa9.85□□□□□ -0.83
APOC1-204ENST00000589078 ZIC2O95409 532 aaPredicted RBP9.85□□□□□ -0.83
APOC1-204ENST00000589078 MT-CO1P00395 513 aa9.85□□□□□ -0.83
APOC1-204ENST00000589078 IGLV3-19P01714 112 aa9.85□□□□□ -0.83
APOC1-204ENST00000589078 PRNPP04156 253 aa9.85□□□□□ -0.83
APOC1-204ENST00000589078 C7P10643 843 aa9.85□□□□□ -0.83
APOC1-204ENST00000589078 TCF4P15884 667 aa9.85□□□□□ -0.83
APOC1-204ENST00000589078 BCKDHBP21953 392 aa9.85□□□□□ -0.83
APOC1-204ENST00000589078 GLDCP23378 1020 aa9.85□□□□□ -0.83
APOC1-204ENST00000589078 SLC8A1P32418 973 aa9.85□□□□□ -0.83
APOC1-204ENST00000589078 DHPSP49366 369 aaPredicted RBP9.85□□□□□ -0.83
APOC1-204ENST00000589078 SNRPD1P62314 119 aaKnown RBP9.85□□□□□ -0.83
APOC1-204ENST00000589078 IRX4P78413 519 aa9.85□□□□□ -0.83
APOC1-204ENST00000589078 ARF5P84085 180 aa9.85□□□□□ -0.83
APOC1-204ENST00000589078 KIF5AQ12840 1032 aa9.85□□□□□ -0.83
APOC1-204ENST00000589078 SERINC3Q13530 473 aa9.85□□□□□ -0.83
APOC1-204ENST00000589078 SOWAHCQ53LP3 525 aaPredicted RBP9.85□□□□□ -0.83
APOC1-204ENST00000589078 INO80DQ53TQ3 878 aaPredicted RBP9.85□□□□□ -0.83
APOC1-204ENST00000589078 SYCP2LQ5T4T6 812 aa9.85□□□□□ -0.83
APOC1-204ENST00000589078 LYSMD4Q5XG99 296 aa9.85□□□□□ -0.83
APOC1-204ENST00000589078 TXNRD3NBQ6F5E7 133 aa9.85□□□□□ -0.83
APOC1-204ENST00000589078 RHOT1Q8IXI2 618 aa9.85□□□□□ -0.83
APOC1-204ENST00000589078 PLPP6Q8IY26 295 aa9.85□□□□□ -0.83
APOC1-204ENST00000589078 RYBPQ8N488 228 aaPredicted RBP9.85□□□□□ -0.83
APOC1-204ENST00000589078 NSMCE1Q8WV22 266 aa9.85□□□□□ -0.83
APOC1-204ENST00000589078 PTPRN2Q92932 1015 aa9.85□□□□□ -0.83
APOC1-204ENST00000589078 TOE1Q96GM8 510 aaKnown RBP9.85□□□□□ -0.83
APOC1-204ENST00000589078 PPP1R16AQ96I34 528 aa9.85□□□□□ -0.83
APOC1-204ENST00000589078 CELF6Q96J87 481 aaKnown RBP9.85□□□□□ -0.83
APOC1-204ENST00000589078 BTBD1Q9H0C5 482 aa9.85□□□□□ -0.83
APOC1-204ENST00000589078 PCED1AQ9H1Q7 454 aa9.85□□□□□ -0.83
APOC1-204ENST00000589078 MTG2Q9H4K7 406 aa9.85□□□□□ -0.83
APOC1-204ENST00000589078 LRRC19Q9H756 370 aa9.85□□□□□ -0.83
APOC1-204ENST00000589078 GRPEL1Q9HAV7 217 aa9.85□□□□□ -0.83
APOC1-204ENST00000589078 SP110Q9HB58 689 aa9.85□□□□□ -0.83
APOC1-204ENST00000589078 SGK2Q9HBY8 427 aa9.85□□□□□ -0.83
APOC1-204ENST00000589078 FBXL12Q9NXK8 326 aa9.85□□□□□ -0.83
APOC1-204ENST00000589078 DDX56Q9NY93 547 aaKnown RBP9.85□□□□□ -0.83
APOC1-204ENST00000589078 UBA2Q9UBT2 640 aaPredicted RBP9.85□□□□□ -0.83
APOC1-204ENST00000589078 SBDSQ9Y3A5 250 aaKnown RBP eCLIP9.85□□□□□ -0.83
APOC1-204ENST00000589078 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa9.84□□□□□ -0.83
APOC1-204ENST00000589078 LRRD1A4D1F6 860 aa9.84□□□□□ -0.83
APOC1-204ENST00000589078 LRRC72A6NJI9 287 aa9.84□□□□□ -0.83
APOC1-204ENST00000589078 BTNL10A8MVZ5 291 aa9.84□□□□□ -0.83
APOC1-204ENST00000589078 K7ERQ8 282 aa9.84□□□□□ -0.83
APOC1-204ENST00000589078 MID1O15344 667 aa9.84□□□□□ -0.83
APOC1-204ENST00000589078 SMAD6O43541 496 aaKnown RBP9.84□□□□□ -0.83
APOC1-204ENST00000589078 PSTPIP1O43586 416 aa9.84□□□□□ -0.83
APOC1-204ENST00000589078 BUB1BO60566 1050 aaPredicted RBP9.84□□□□□ -0.83
APOC1-204ENST00000589078 PRAMEF11O60813 436 aa9.84□□□□□ -0.83
APOC1-204ENST00000589078 GSRP00390 522 aa9.84□□□□□ -0.83
APOC1-204ENST00000589078 VAV1P15498 845 aa9.84□□□□□ -0.83
APOC1-204ENST00000589078 MX2P20592 715 aa9.84□□□□□ -0.83
APOC1-204ENST00000589078 COMTP21964 271 aa9.84□□□□□ -0.83
APOC1-204ENST00000589078 CHRNA3P32297 505 aa9.84□□□□□ -0.83
APOC1-204ENST00000589078 HOXD12P35452 270 aa9.84□□□□□ -0.83
APOC1-204ENST00000589078 MAPK8P45983 427 aa9.84□□□□□ -0.83
APOC1-204ENST00000589078 PAPOLAP51003 745 aaKnown RBP9.84□□□□□ -0.83
APOC1-204ENST00000589078 VAV2P52735 878 aa9.84□□□□□ -0.83
APOC1-204ENST00000589078 TAS2R40P59535 323 aa9.84□□□□□ -0.83
APOC1-204ENST00000589078 SIM1P81133 766 aaPredicted RBP9.84□□□□□ -0.83
APOC1-204ENST00000589078 RAD51Q06609 339 aa9.84□□□□□ -0.83
APOC1-204ENST00000589078 RFTN1Q14699 578 aaPredicted RBP9.84□□□□□ -0.83
APOC1-204ENST00000589078 CARD16Q5EG05 197 aa9.84□□□□□ -0.83
APOC1-204ENST00000589078 WDR45BQ5MNZ6 344 aa9.84□□□□□ -0.83
APOC1-204ENST00000589078 TMCO4Q5TGY1 634 aa9.84□□□□□ -0.83
APOC1-204ENST00000589078 C11orf63Q6NUN7 778 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 83.5 ms