RNA–Protein interactions for RNA: ENST00000588745.5

SMAD4-205, Transcript of SMAD family member 4, humanhuman

TSL 5 BASIC

Gene SMAD4, Length 1,371 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-205ENST00000588745 CINPQ9BW66 212 aaPredicted RBP11.59□□□□□ -0.55
SMAD4-205ENST00000588745 FSD1LQ9BXM9 530 aa11.59□□□□□ -0.55
SMAD4-205ENST00000588745 STMN4Q9H169 189 aaPredicted RBP11.59□□□□□ -0.55
SMAD4-205ENST00000588745 NSUN3Q9H649 340 aaKnown RBP11.59□□□□□ -0.55
SMAD4-205ENST00000588745 PLAC1Q9HBJ0 212 aa11.59□□□□□ -0.55
SMAD4-205ENST00000588745 VPS45Q9NRW7 570 aa11.59□□□□□ -0.55
SMAD4-205ENST00000588745 EURLQ9NYK6 297 aa11.59□□□□□ -0.55
SMAD4-205ENST00000588745 BFARQ9NZS9 450 aa11.59□□□□□ -0.55
SMAD4-205ENST00000588745 BCCIPQ9P287 314 aaKnown RBP eCLIP11.59□□□□□ -0.55
SMAD4-205ENST00000588745 SEPT3Q9UH03 358 aa11.59□□□□□ -0.55
SMAD4-205ENST00000588745 LGALS13Q9UHV8 139 aa11.59□□□□□ -0.55
SMAD4-205ENST00000588745 RABGEF1Q9UJ41 708 aa11.59□□□□□ -0.55
SMAD4-205ENST00000588745 VPS28Q9UK41 221 aa11.59□□□□□ -0.55
SMAD4-205ENST00000588745 OR51B4Q9Y5P0 310 aa11.59□□□□□ -0.55
SMAD4-205ENST00000588745 TRANK1O15050 2925 aa11.59□□□□□ -0.55
SMAD4-205ENST00000588745 RANBP2P49792 3224 aaKnown RBP11.58□□□□□ -0.55
SMAD4-205ENST00000588745 CBX4O00257 560 aa11.58□□□□□ -0.56
SMAD4-205ENST00000588745 MUSKO15146 869 aa11.58□□□□□ -0.56
SMAD4-205ENST00000588745 ZMPSTE24O75844 475 aa11.58□□□□□ -0.56
SMAD4-205ENST00000588745 AGTP01019 485 aa11.58□□□□□ -0.56
SMAD4-205ENST00000588745 MMP2P08253 660 aa11.58□□□□□ -0.56
SMAD4-205ENST00000588745 GCAP28676 217 aa11.58□□□□□ -0.56
SMAD4-205ENST00000588745 MZF1P28698 734 aaPredicted RBP11.58□□□□□ -0.56
SMAD4-205ENST00000588745 WEE1P30291 646 aa11.58□□□□□ -0.56
SMAD4-205ENST00000588745 CD86P42081 329 aa11.58□□□□□ -0.56
SMAD4-205ENST00000588745 NPY2RP49146 381 aa11.58□□□□□ -0.56
SMAD4-205ENST00000588745 CRADDP78560 199 aa11.58□□□□□ -0.56
SMAD4-205ENST00000588745 EFTUD2Q15029 972 aaKnown RBP eCLIP11.58□□□□□ -0.569e-8■■■■■ 28.2
SMAD4-205ENST00000588745 TNFAIP8L3Q5GJ75 292 aa11.58□□□□□ -0.56
SMAD4-205ENST00000588745 TCEAL5Q5H9L2 206 aa11.58□□□□□ -0.56
SMAD4-205ENST00000588745 STEAP4Q687X5 459 aa11.58□□□□□ -0.56
SMAD4-205ENST00000588745 CASC4Q6P4E1 433 aa11.58□□□□□ -0.56
SMAD4-205ENST00000588745 TMEM184AQ6ZMB5 413 aa11.58□□□□□ -0.56
SMAD4-205ENST00000588745 PRPF39Q86UA1 669 aaKnown RBP11.58□□□□□ -0.56
SMAD4-205ENST00000588745 EFHBQ8N7U6 833 aa11.58□□□□□ -0.56
SMAD4-205ENST00000588745 FAM76AQ8TAV0 307 aa11.58□□□□□ -0.56
SMAD4-205ENST00000588745 TADA1Q96BN2 335 aa11.58□□□□□ -0.56
SMAD4-205ENST00000588745 OTUB2Q96DC9 234 aa11.58□□□□□ -0.56
SMAD4-205ENST00000588745 ALG14Q96F25 216 aa11.58□□□□□ -0.56
SMAD4-205ENST00000588745 MRGPRX2Q96LB1 330 aa11.58□□□□□ -0.56
SMAD4-205ENST00000588745 PSKH2Q96QS6 385 aa11.58□□□□□ -0.56
SMAD4-205ENST00000588745 MGME1Q9BQP7 344 aa11.58□□□□□ -0.56
SMAD4-205ENST00000588745 FEM1AQ9BSK4 669 aa11.58□□□□□ -0.56
SMAD4-205ENST00000588745 IGFLR1Q9H665 355 aa11.58□□□□□ -0.56
SMAD4-205ENST00000588745 PLK2Q9NYY3 685 aa11.58□□□□□ -0.56
SMAD4-205ENST00000588745 SAMD15Q9P1V8 674 aa11.58□□□□□ -0.56
SMAD4-205ENST00000588745 TBC1D14Q9P2M4 693 aa11.58□□□□□ -0.56
SMAD4-205ENST00000588745 CTNNAL1Q9UBT7 734 aa11.58□□□□□ -0.56
SMAD4-205ENST00000588745 SLC24A2Q9UI40 661 aa11.58□□□□□ -0.56
SMAD4-205ENST00000588745 NOVA2Q9UNW9 492 aaKnown RBP11.58□□□□□ -0.56
SMAD4-205ENST00000588745 ACTL7AQ9Y615 435 aa11.58□□□□□ -0.56
SMAD4-205ENST00000588745 MIA3Q5JRA6 1907 aa11.58□□□□□ -0.56
SMAD4-205ENST00000588745 POC1B-GALNT4F8VUJ3 575 aa11.57□□□□□ -0.56
SMAD4-205ENST00000588745 SNAP91O60641 907 aa11.57□□□□□ -0.56
SMAD4-205ENST00000588745 PMPCBO75439 489 aa11.57□□□□□ -0.56
SMAD4-205ENST00000588745 PENKP01210 267 aaPredicted RBP11.57□□□□□ -0.56
SMAD4-205ENST00000588745 C1QAP02745 245 aa11.57□□□□□ -0.56
SMAD4-205ENST00000588745 NR1D1P20393 614 aa11.57□□□□□ -0.56
SMAD4-205ENST00000588745 FSHRP23945 695 aa11.57□□□□□ -0.56
SMAD4-205ENST00000588745 PRKCHP24723 683 aa11.57□□□□□ -0.56
SMAD4-205ENST00000588745 ATP5DP30049 168 aa11.57□□□□□ -0.56
SMAD4-205ENST00000588745 WNT3AP56704 352 aa11.57□□□□□ -0.56
SMAD4-205ENST00000588745 GEMIN4P57678 1058 aaKnown RBP11.57□□□□□ -0.56
SMAD4-205ENST00000588745 SKOR1P84550 965 aa11.57□□□□□ -0.56
SMAD4-205ENST00000588745 HYAL1Q12794 435 aa11.57□□□□□ -0.56
SMAD4-205ENST00000588745 LMAN2Q12907 356 aa11.57□□□□□ -0.56
SMAD4-205ENST00000588745 CBX2Q14781 532 aaPredicted RBP11.57□□□□□ -0.56
SMAD4-205ENST00000588745 RASA2Q15283 850 aa11.57□□□□□ -0.56
SMAD4-205ENST00000588745 SLC14A2Q15849 920 aa11.57□□□□□ -0.56
SMAD4-205ENST00000588745 DENND5AQ6IQ26 1287 aa11.57□□□□□ -0.56
SMAD4-205ENST00000588745 GPR149Q86SP6 731 aa11.57□□□□□ -0.56
SMAD4-205ENST00000588745 NPAS3Q8IXF0 933 aa11.57□□□□□ -0.56
SMAD4-205ENST00000588745 CELF5Q8N6W0 485 aaKnown RBP11.57□□□□□ -0.56
SMAD4-205ENST00000588745 FIBINQ8TAL6 211 aa11.57□□□□□ -0.56
SMAD4-205ENST00000588745 PAFAH2Q99487 392 aa11.57□□□□□ -0.56
SMAD4-205ENST00000588745 SEMA3CQ99985 751 aa11.57□□□□□ -0.56
SMAD4-205ENST00000588745 TRIM56Q9BRZ2 755 aaKnown RBP11.57□□□□□ -0.56
SMAD4-205ENST00000588745 DHRS4Q9BTZ2 278 aa11.57□□□□□ -0.56
SMAD4-205ENST00000588745 C2orf49Q9BVC5 232 aaPredicted RBP11.57□□□□□ -0.56
SMAD4-205ENST00000588745 IL22Q9GZX6 179 aa11.57□□□□□ -0.56
SMAD4-205ENST00000588745 KIAA1522Q9P206 1035 aaPredicted RBP11.57□□□□□ -0.56
SMAD4-205ENST00000588745 PSMC3IPQ9P2W1 217 aaPredicted RBP11.57□□□□□ -0.56
SMAD4-205ENST00000588745 VPS51Q9UID3 782 aa11.57□□□□□ -0.56
SMAD4-205ENST00000588745 CLEC4EQ9ULY5 219 aa11.57□□□□□ -0.56
SMAD4-205ENST00000588745 MYLKQ15746 1914 aa11.56□□□□□ -0.56
SMAD4-205ENST00000588745 KIF26AQ9ULI4 1882 aaPredicted RBP11.56□□□□□ -0.56
SMAD4-205ENST00000588745 SLC9A3R1O14745 358 aaPredicted RBP11.56□□□□□ -0.56
SMAD4-205ENST00000588745 LINC01565O15544 149 aa11.56□□□□□ -0.56
SMAD4-205ENST00000588745 TMCC1O94876 653 aa11.56□□□□□ -0.56
SMAD4-205ENST00000588745 CD160O95971 181 aa11.56□□□□□ -0.56
SMAD4-205ENST00000588745 CR2P20023 1033 aa11.56□□□□□ -0.56
SMAD4-205ENST00000588745 CD70P32970 193 aa11.56□□□□□ -0.56
SMAD4-205ENST00000588745 MAGOHP61326 146 aaKnown RBP11.56□□□□□ -0.56
SMAD4-205ENST00000588745 SLC12A1Q13621 1099 aa11.56□□□□□ -0.56
SMAD4-205ENST00000588745 IHHQ14623 411 aa11.56□□□□□ -0.56
SMAD4-205ENST00000588745 CRYMQ14894 314 aa11.56□□□□□ -0.56
SMAD4-205ENST00000588745 TMED2Q15363 201 aa11.56□□□□□ -0.56
SMAD4-205ENST00000588745 CYTH1Q15438 398 aa11.56□□□□□ -0.56
SMAD4-205ENST00000588745 PCSK7Q16549 785 aa11.56□□□□□ -0.56
SMAD4-205ENST00000588745 SKIDA1Q1XH10 827 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms