RNA–Protein interactions for RNA: ENST00000587525.5

CACNA1A-209, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 1 (best)

Gene CACNA1A, Length 3,765 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-209ENST00000587525 PBX3P40426 434 aa13.94□□□□□ -0.18
CACNA1A-209ENST00000587525 ZNF157P51786 506 aaPredicted RBP13.94□□□□□ -0.18
CACNA1A-209ENST00000587525 CHN2P52757 468 aa13.94□□□□□ -0.18
CACNA1A-209ENST00000587525 SEMG2Q02383 582 aa13.94□□□□□ -0.18
CACNA1A-209ENST00000587525 CAPRIN1Q14444 709 aaKnown RBP13.94□□□□□ -0.18
CACNA1A-209ENST00000587525 TARBP2Q15633 366 aaKnown RBP13.94□□□□□ -0.18
CACNA1A-209ENST00000587525 NCBP2-AS2Q69YL0 99 aa13.94□□□□□ -0.18
CACNA1A-209ENST00000587525 DRICH1Q6PGQ1 229 aaPredicted RBP13.94□□□□□ -0.18
CACNA1A-209ENST00000587525 C2orf69Q8N8R5 385 aa13.94□□□□□ -0.18
CACNA1A-209ENST00000587525 KHSRPQ92945 711 aaKnown RBP eCLIP13.94□□□□□ -0.18
CACNA1A-209ENST00000587525 HPS4Q9NQG7 708 aa13.94□□□□□ -0.18
CACNA1A-209ENST00000587525 NCKIPSDQ9NZQ3 722 aa13.94□□□□□ -0.18
CACNA1A-209ENST00000587525 CDH22Q9UJ99 828 aa13.94□□□□□ -0.18
CACNA1A-209ENST00000587525 IPPQ9Y573 584 aa13.94□□□□□ -0.18
CACNA1A-209ENST00000587525 ARHGEF37A1IGU5 675 aa13.93□□□□□ -0.18
CACNA1A-209ENST00000587525 C17orf102A2RUQ5 167 aa13.93□□□□□ -0.18
CACNA1A-209ENST00000587525 ALDOAP04075 364 aaKnown RBP13.93□□□□□ -0.18
CACNA1A-209ENST00000587525 TFEBP19484 476 aa13.93□□□□□ -0.18
CACNA1A-209ENST00000587525 NR4A1P22736 598 aa13.93□□□□□ -0.18
CACNA1A-209ENST00000587525 GABRB2P47870 512 aa13.93□□□□□ -0.18
CACNA1A-209ENST00000587525 PIK3CGP48736 1102 aa13.93□□□□□ -0.18
CACNA1A-209ENST00000587525 RPL14P50914 215 aaKnown RBP13.93□□□□□ -0.18
CACNA1A-209ENST00000587525 FASTKQ14296 549 aaKnown RBP13.93□□□□□ -0.18
CACNA1A-209ENST00000587525 SLC39A12Q504Y0 691 aa13.93□□□□□ -0.18
CACNA1A-209ENST00000587525 FRA10AC1Q70Z53 315 aa13.93□□□□□ -0.18
CACNA1A-209ENST00000587525 OR9I1Q8NGQ6 314 aa13.93□□□□□ -0.18
CACNA1A-209ENST00000587525 FNIP1Q8TF40 1166 aa13.93□□□□□ -0.18
CACNA1A-209ENST00000587525 TRAPPC9Q96Q05 1148 aa13.93□□□□□ -0.18
CACNA1A-209ENST00000587525 TINF2Q9BSI4 451 aa13.93□□□□□ -0.18
CACNA1A-209ENST00000587525 C1orf50Q9BV19 199 aa13.93□□□□□ -0.18
CACNA1A-209ENST00000587525 FRMD8Q9BZ67 464 aaPredicted RBP13.93□□□□□ -0.18
CACNA1A-209ENST00000587525 FAM96AQ9H5X1 160 aa13.93□□□□□ -0.18
CACNA1A-209ENST00000587525 MID1IP1Q9NPA3 183 aa13.93□□□□□ -0.18
CACNA1A-209ENST00000587525 SLC12A8A0AV02 714 aa13.93□□□□□ -0.18
CACNA1A-209ENST00000587525 OAS1P00973 400 aaKnown RBP13.93□□□□□ -0.18
CACNA1A-209ENST00000587525 CRHR1P34998 444 aa13.93□□□□□ -0.18
CACNA1A-209ENST00000587525 GRIA3P42263 894 aa13.93□□□□□ -0.18
CACNA1A-209ENST00000587525 ZNF132P52740 706 aa13.93□□□□□ -0.18
CACNA1A-209ENST00000587525 NEDD8Q15843 81 aa13.93□□□□□ -0.18
CACNA1A-209ENST00000587525 CCL14Q16627 93 aa13.93□□□□□ -0.18
CACNA1A-209ENST00000587525 MTX3Q5HYI7 312 aa13.93□□□□□ -0.18
CACNA1A-209ENST00000587525 OVOS1Q6IE37 1185 aa13.93□□□□□ -0.18
CACNA1A-209ENST00000587525 C16orf89Q6UX73 402 aa13.93□□□□□ -0.18
CACNA1A-209ENST00000587525 ZBTB49Q6ZSB9 765 aa13.93□□□□□ -0.18
CACNA1A-209ENST00000587525 ACVR1CQ8NER5 493 aa13.93□□□□□ -0.18
CACNA1A-209ENST00000587525 DTNBP1Q96EV8 351 aa13.93□□□□□ -0.18
CACNA1A-209ENST00000587525 HSPBAP1Q96EW2 488 aa13.93□□□□□ -0.18
CACNA1A-209ENST00000587525 ANKRD27Q96NW4 1050 aa13.93□□□□□ -0.18
CACNA1A-209ENST00000587525 PAAF1Q9BRP4 392 aa13.93□□□□□ -0.18
CACNA1A-209ENST00000587525 KANSL3Q9P2N6 904 aa13.93□□□□□ -0.18
CACNA1A-209ENST00000587525 POMPQ9Y244 141 aa13.93□□□□□ -0.18
CACNA1A-209ENST00000587525 TLL2Q9Y6L7 1015 aa13.93□□□□□ -0.18
CACNA1A-209ENST00000587525 KLHL33A6NCF5 533 aa13.93□□□□□ -0.18
CACNA1A-209ENST00000587525 FKBP6O75344 327 aa13.93□□□□□ -0.18
CACNA1A-209ENST00000587525 HSPA8P11142 646 aaKnown RBP13.93□□□□□ -0.18
CACNA1A-209ENST00000587525 PCSK1P29120 753 aa13.93□□□□□ -0.18
CACNA1A-209ENST00000587525 CCDC15Q0P6D6 951 aa13.93□□□□□ -0.18
CACNA1A-209ENST00000587525 PPP1R8Q12972 351 aaKnown RBP13.93□□□□□ -0.18
CACNA1A-209ENST00000587525 LSM12Q3MHD2 195 aaKnown RBP13.93□□□□□ -0.18
CACNA1A-209ENST00000587525 PLEKHH3Q7Z736 793 aa13.93□□□□□ -0.18
CACNA1A-209ENST00000587525 PCED1BQ96HM7 432 aa13.93□□□□□ -0.18
CACNA1A-209ENST00000587525 SLC45A3Q96JT2 553 aa13.93□□□□□ -0.18
CACNA1A-209ENST00000587525 CPNE1Q99829 537 aa13.93□□□□□ -0.18
CACNA1A-209ENST00000587525 TIMM22Q9Y584 194 aa13.93□□□□□ -0.18
CACNA1A-209ENST00000587525 NDUFS3O75489 264 aa13.92□□□□□ -0.18
CACNA1A-209ENST00000587525 TFPTP0C1Z6 253 aa13.92□□□□□ -0.18
CACNA1A-209ENST00000587525 NR2C2P49116 596 aa13.92□□□□□ -0.18
CACNA1A-209ENST00000587525 CDK7P50613 346 aa13.92□□□□□ -0.18
CACNA1A-209ENST00000587525 SOX4Q06945 474 aaPredicted RBP13.92□□□□□ -0.18
CACNA1A-209ENST00000587525 COL9A2Q14055 689 aaPredicted RBP13.92□□□□□ -0.18
CACNA1A-209ENST00000587525 GALNT3Q14435 633 aa13.92□□□□□ -0.18
CACNA1A-209ENST00000587525 GPC2Q8N158 579 aa13.92□□□□□ -0.18
CACNA1A-209ENST00000587525 OR6K2Q8NGY2 324 aa13.92□□□□□ -0.18
CACNA1A-209ENST00000587525 HDAC10Q969S8 669 aa13.92□□□□□ -0.18
CACNA1A-209ENST00000587525 RPL10LQ96L21 214 aaKnown RBP13.92□□□□□ -0.18
CACNA1A-209ENST00000587525 LATS2Q9NRM7 1088 aa13.92□□□□□ -0.18
CACNA1A-209ENST00000587525 AP4B1Q9Y6B7 739 aa13.92□□□□□ -0.18
CACNA1A-209ENST00000587525 STYXL1Q9Y6J8 313 aa13.92□□□□□ -0.18
CACNA1A-209ENST00000587525 SCN9AQ15858 1988 aa13.92□□□□□ -0.18
CACNA1A-209ENST00000587525 TIPRLO75663 272 aa13.92□□□□□ -0.18
CACNA1A-209ENST00000587525 XRCC1P18887 633 aaPredicted RBP13.92□□□□□ -0.18
CACNA1A-209ENST00000587525 CD52P31358 61 aa13.92□□□□□ -0.18
CACNA1A-209ENST00000587525 GGT5P36269 586 aa13.92□□□□□ -0.18
CACNA1A-209ENST00000587525 CD151P48509 253 aa13.92□□□□□ -0.18
CACNA1A-209ENST00000587525 CARTPTQ16568 116 aa13.92□□□□□ -0.18
CACNA1A-209ENST00000587525 SLC25A52Q3SY17 297 aa13.92□□□□□ -0.18
CACNA1A-209ENST00000587525 TEDDM1Q5T9Z0 273 aa13.92□□□□□ -0.18
CACNA1A-209ENST00000587525 TRPC4APQ8TEL6 797 aa13.92□□□□□ -0.18
CACNA1A-209ENST00000587525 FCRL2Q96LA5 508 aaPredicted RBP13.92□□□□□ -0.18
CACNA1A-209ENST00000587525 FCRL3Q96P31 734 aaPredicted RBP13.92□□□□□ -0.18
CACNA1A-209ENST00000587525 COLEC11Q9BWP8 271 aa13.92□□□□□ -0.18
CACNA1A-209ENST00000587525 S100A14Q9HCY8 104 aa13.92□□□□□ -0.18
CACNA1A-209ENST00000587525 CD274Q9NZQ7 290 aa13.92□□□□□ -0.18
CACNA1A-209ENST00000587525 HEMK1Q9Y5R4 338 aaPredicted RBP13.92□□□□□ -0.18
CACNA1A-209ENST00000587525 CBX4O00257 560 aa13.92□□□□□ -0.18
CACNA1A-209ENST00000587525 ICAM3P32942 547 aa13.92□□□□□ -0.18
CACNA1A-209ENST00000587525 CDH15P55291 814 aa13.92□□□□□ -0.18
CACNA1A-209ENST00000587525 SNX17Q15036 470 aa13.92□□□□□ -0.18
CACNA1A-209ENST00000587525 GRTP1Q5TC63 336 aa13.92□□□□□ -0.18
CACNA1A-209ENST00000587525 RAP1GAP2Q684P5 730 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms