RNA–Protein interactions for RNA: ENST00000585058.1

RAB11FIP4-210, Transcript of RAB11 family interacting protein 4, humanhuman

TSL 2

Gene RAB11FIP4, Length 5,824 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP4-210ENST00000585058 HIST1H2ACQ93077 130 aa13.41□□□□□ -0.26
RAB11FIP4-210ENST00000585058 DUSP9Q99956 384 aaKnown RBP13.41□□□□□ -0.26
RAB11FIP4-210ENST00000585058 NCKAP1Q9Y2A7 1128 aa13.41□□□□□ -0.26
RAB11FIP4-210ENST00000585058 ECDO95905 644 aaPredicted RBP13.41□□□□□ -0.26
RAB11FIP4-210ENST00000585058 CALCAP01258 141 aa13.41□□□□□ -0.26
RAB11FIP4-210ENST00000585058 ANXA5P08758 320 aa13.41□□□□□ -0.26
RAB11FIP4-210ENST00000585058 PRG2P13727 222 aa13.41□□□□□ -0.26
RAB11FIP4-210ENST00000585058 EIF4BP23588 611 aaKnown RBP13.41□□□□□ -0.26
RAB11FIP4-210ENST00000585058 NTRK3Q16288 839 aa13.41□□□□□ -0.26
RAB11FIP4-210ENST00000585058 INTS11Q5TA45 600 aaKnown RBP13.41□□□□□ -0.26
RAB11FIP4-210ENST00000585058 GCNT7Q6ZNI0 430 aa13.41□□□□□ -0.26
RAB11FIP4-210ENST00000585058 PSTKQ8IV42 348 aaKnown RBP13.41□□□□□ -0.26
RAB11FIP4-210ENST00000585058 FBXW8Q8N3Y1 598 aa13.41□□□□□ -0.26
RAB11FIP4-210ENST00000585058 PDGFDQ9GZP0 370 aaPredicted RBP13.41□□□□□ -0.26
RAB11FIP4-210ENST00000585058 IL22Q9GZX6 179 aa13.41□□□□□ -0.26
RAB11FIP4-210ENST00000585058 TRIT1Q9H3H1 467 aaKnown RBP13.41□□□□□ -0.26
RAB11FIP4-210ENST00000585058 PSMD11O00231 422 aa13.4□□□□□ -0.26
RAB11FIP4-210ENST00000585058 TGFB3P10600 412 aa13.4□□□□□ -0.26
RAB11FIP4-210ENST00000585058 SLC45A4Q5BKX6 768 aa13.4□□□□□ -0.26
RAB11FIP4-210ENST00000585058 PCID2Q5JVF3 399 aa13.4□□□□□ -0.26
RAB11FIP4-210ENST00000585058 PACS2Q86VP3 889 aa13.4□□□□□ -0.26
RAB11FIP4-210ENST00000585058 MAGEC3Q8TD91 643 aa13.4□□□□□ -0.26
RAB11FIP4-210ENST00000585058 DPF3Q92784 378 aa13.4□□□□□ -0.26
RAB11FIP4-210ENST00000585058 LENG9Q96B70 501 aa13.4□□□□□ -0.26
RAB11FIP4-210ENST00000585058 CLIP3Q96DZ5 547 aa13.4□□□□□ -0.26
RAB11FIP4-210ENST00000585058 QRFPRQ96P65 431 aa13.4□□□□□ -0.26
RAB11FIP4-210ENST00000585058 FUCA2Q9BTY2 467 aa13.4□□□□□ -0.26
RAB11FIP4-210ENST00000585058 ZNF232Q9UNY5 417 aa13.4□□□□□ -0.26
RAB11FIP4-210ENST00000585058 GMPPBQ9Y5P6 360 aa13.4□□□□□ -0.26
RAB11FIP4-210ENST00000585058 ANKRD63C9JTQ0 380 aa13.4□□□□□ -0.26
RAB11FIP4-210ENST00000585058 SASH3O75995 380 aa13.4□□□□□ -0.26
RAB11FIP4-210ENST00000585058 CATP04040 527 aaKnown RBP13.4□□□□□ -0.26
RAB11FIP4-210ENST00000585058 UQCRBP14927 111 aa13.4□□□□□ -0.26
RAB11FIP4-210ENST00000585058 PPIL2Q13356 520 aa13.4□□□□□ -0.26
RAB11FIP4-210ENST00000585058 TMEM119Q4V9L6 283 aa13.4□□□□□ -0.26
RAB11FIP4-210ENST00000585058 ARHGAP36Q6ZRI8 547 aa13.4□□□□□ -0.26
RAB11FIP4-210ENST00000585058 FAM220AQ7Z4H9 259 aa13.4□□□□□ -0.26
RAB11FIP4-210ENST00000585058 EEF1AKMT1Q8WVE0 214 aa13.4□□□□□ -0.26
RAB11FIP4-210ENST00000585058 ZFP14Q9HCL3 533 aa13.4□□□□□ -0.26
RAB11FIP4-210ENST00000585058 SNX6Q9UNH7 406 aa13.4□□□□□ -0.26
RAB11FIP4-210ENST00000585058 ASTN2O75129 1339 aaPredicted RBP13.4□□□□□ -0.26
RAB11FIP4-210ENST00000585058 NFASCO94856 1347 aa13.4□□□□□ -0.26
RAB11FIP4-210ENST00000585058 C1orf167Q5SNV9 1468 aa13.4□□□□□ -0.26
RAB11FIP4-210ENST00000585058 IFNA16P05015 189 aa13.4□□□□□ -0.26
RAB11FIP4-210ENST00000585058 SKP1P63208 163 aa13.4□□□□□ -0.26
RAB11FIP4-210ENST00000585058 TOP3AQ13472 1001 aaPredicted RBP13.4□□□□□ -0.26
RAB11FIP4-210ENST00000585058 DCTN2Q13561 401 aaKnown RBP13.4□□□□□ -0.26
RAB11FIP4-210ENST00000585058 ACAP1Q15027 740 aa13.4□□□□□ -0.26
RAB11FIP4-210ENST00000585058 UTS2BQ765I0 119 aa13.4□□□□□ -0.26
RAB11FIP4-210ENST00000585058 CREG2Q8IUH2 290 aa13.4□□□□□ -0.26
RAB11FIP4-210ENST00000585058 PIWIL2Q8TC59 973 aaKnown RBP13.4□□□□□ -0.26
RAB11FIP4-210ENST00000585058 FAM192AQ9GZU8 254 aa13.4□□□□□ -0.26
RAB11FIP4-210ENST00000585058 KIAA1683Q9H0B3 1180 aa13.4□□□□□ -0.26
RAB11FIP4-210ENST00000585058 CLN6Q9NWW5 311 aa13.4□□□□□ -0.26
RAB11FIP4-210ENST00000585058 SLC12A4Q9UP95 1085 aa13.4□□□□□ -0.26
RAB11FIP4-210ENST00000585058 PCDHA11Q9Y5I1 949 aa13.4□□□□□ -0.26
RAB11FIP4-210ENST00000585058 CCDC189A1A4V9 331 aa13.4□□□□□ -0.26
RAB11FIP4-210ENST00000585058 TISP43B9A030 160 aa13.4□□□□□ -0.26
RAB11FIP4-210ENST00000585058 IDH3BO43837 385 aa13.4□□□□□ -0.26
RAB11FIP4-210ENST00000585058 SHBGP04278 402 aa13.4□□□□□ -0.26
RAB11FIP4-210ENST00000585058 ARF5P84085 180 aa13.4□□□□□ -0.26
RAB11FIP4-210ENST00000585058 RALGDSQ12967 914 aa13.4□□□□□ -0.26
RAB11FIP4-210ENST00000585058 PPM1LQ5SGD2 360 aa13.4□□□□□ -0.26
RAB11FIP4-210ENST00000585058 SPESP1Q6UW49 350 aa13.4□□□□□ -0.26
RAB11FIP4-210ENST00000585058 CYP4X1Q8N118 509 aa13.4□□□□□ -0.26
RAB11FIP4-210ENST00000585058 DNAJC1Q96KC8 554 aaKnown RBP13.4□□□□□ -0.26
RAB11FIP4-210ENST00000585058 MBOAT7Q96N66 472 aa13.4□□□□□ -0.26
RAB11FIP4-210ENST00000585058 TMEM138Q9NPI0 162 aa13.4□□□□□ -0.26
RAB11FIP4-210ENST00000585058 UXTQ9UBK9 157 aaPredicted RBP13.4□□□□□ -0.26
RAB11FIP4-210ENST00000585058 OR12D3Q9UGF7 316 aa13.4□□□□□ -0.26
RAB11FIP4-210ENST00000585058 IKZF3Q9UKT9 509 aa13.4□□□□□ -0.26
RAB11FIP4-210ENST00000585058 AP3M1Q9Y2T2 418 aa13.4□□□□□ -0.26
RAB11FIP4-210ENST00000585058 ADAMTS13Q76LX8 1427 aa13.4□□□□□ -0.26
RAB11FIP4-210ENST00000585058 PDHXO00330 501 aa13.4□□□□□ -0.27
RAB11FIP4-210ENST00000585058 ACSL4O60488 711 aa13.4□□□□□ -0.27
RAB11FIP4-210ENST00000585058 DBTP11182 482 aaKnown RBP13.4□□□□□ -0.27
RAB11FIP4-210ENST00000585058 HOXB8P17481 243 aaPredicted RBP13.4□□□□□ -0.27
RAB11FIP4-210ENST00000585058 TSPAN8P19075 237 aa13.4□□□□□ -0.27
RAB11FIP4-210ENST00000585058 PERM1Q5SV97 790 aa13.4□□□□□ -0.27
RAB11FIP4-210ENST00000585058 ZPBP2Q6X784 338 aa13.4□□□□□ -0.27
RAB11FIP4-210ENST00000585058 CHPFQ8IZ52 775 aa13.4□□□□□ -0.27
RAB11FIP4-210ENST00000585058 KAT5Q92993 513 aa13.4□□□□□ -0.27
RAB11FIP4-210ENST00000585058 NDNQ99608 321 aa13.4□□□□□ -0.27
RAB11FIP4-210ENST00000585058 GBA2Q9HCG7 927 aaPredicted RBP13.4□□□□□ -0.27
RAB11FIP4-210ENST00000585058 ABCB10Q9NRK6 738 aa13.4□□□□□ -0.27
RAB11FIP4-210ENST00000585058 MARCH2Q9P0N8 246 aa13.4□□□□□ -0.27
RAB11FIP4-210ENST00000585058 CD163L1Q9NR16 1453 aa13.39□□□□□ -0.27
RAB11FIP4-210ENST00000585058 FRMPD4Q14CM0 1322 aa13.39□□□□□ -0.27
RAB11FIP4-210ENST00000585058 CHADO15335 359 aa13.39□□□□□ -0.27
RAB11FIP4-210ENST00000585058 SNRPB2P08579 225 aaKnown RBP13.39□□□□□ -0.27
RAB11FIP4-210ENST00000585058 SQLEQ14534 574 aa13.39□□□□□ -0.27
RAB11FIP4-210ENST00000585058 TTMPQ5BVD1 217 aa13.39□□□□□ -0.27
RAB11FIP4-210ENST00000585058 STXBP5Q5T5C0 1151 aa13.39□□□□□ -0.27
RAB11FIP4-210ENST00000585058 UNC5AQ6ZN44 842 aa13.39□□□□□ -0.27
RAB11FIP4-210ENST00000585058 FUKQ8N0W3 1084 aa13.39□□□□□ -0.27
RAB11FIP4-210ENST00000585058 EFCAB3Q8N7B9 438 aa13.39□□□□□ -0.27
RAB11FIP4-210ENST00000585058 ASB8Q9H765 288 aa13.39□□□□□ -0.27
RAB11FIP4-210ENST00000585058 BPIFA1Q9NP55 256 aa13.39□□□□□ -0.27
RAB11FIP4-210ENST00000585058 ABCC13Q9NSE7 274 aa13.39□□□□□ -0.27
RAB11FIP4-210ENST00000585058 PTGFRNQ9P2B2 879 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms