RNA–Protein interactions for RNA: ENST00000584773.5

SRSF1-208, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 5 BASIC

Gene SRSF1, Length 1,317 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-208ENST00000584773 CA9Q16790 459 aa18.36■□□□□ 0.53
SRSF1-208ENST00000584773 ST3GAL2Q16842 350 aa18.36■□□□□ 0.53
SRSF1-208ENST00000584773 CARD16Q5EG05 197 aa18.36■□□□□ 0.53
SRSF1-208ENST00000584773 PLEKHA7Q6IQ23 1121 aa18.36■□□□□ 0.53
SRSF1-208ENST00000584773 PRPF39Q86UA1 669 aaKnown RBP18.36■□□□□ 0.53
SRSF1-208ENST00000584773 TRIM69Q86WT6 500 aa18.36■□□□□ 0.53
SRSF1-208ENST00000584773 SPATS2Q86XZ4 545 aaKnown RBP18.36■□□□□ 0.53
SRSF1-208ENST00000584773 ZNF354CQ86Y25 554 aa18.36■□□□□ 0.53
SRSF1-208ENST00000584773 PCDH20Q8N6Y1 951 aaKnown RBP18.36■□□□□ 0.53
SRSF1-208ENST00000584773 RTL3Q8N8U3 475 aaKnown RBP18.36■□□□□ 0.53
SRSF1-208ENST00000584773 VOPP1Q96AW1 172 aa18.36■□□□□ 0.53
SRSF1-208ENST00000584773 CEP44Q9C0F1 390 aa18.36■□□□□ 0.53
SRSF1-208ENST00000584773 KDM4CQ9H3R0 1056 aa18.36■□□□□ 0.53
SRSF1-208ENST00000584773 ZFR2Q9UPR6 939 aaKnown RBP18.36■□□□□ 0.53
SRSF1-208ENST00000584773 PCDHGB2Q9Y5G2 931 aa18.36■□□□□ 0.53
SRSF1-208ENST00000584773 USP24Q9UPU5 2620 aa18.36■□□□□ 0.53
SRSF1-208ENST00000584773 A0A1B0GTQ1 180 aa18.35■□□□□ 0.53
SRSF1-208ENST00000584773 SLC31A1O15431 190 aa18.35■□□□□ 0.53
SRSF1-208ENST00000584773 FLRT2O43155 660 aa18.35■□□□□ 0.53
SRSF1-208ENST00000584773 FTLP02792 175 aaPredicted RBP18.35■□□□□ 0.53
SRSF1-208ENST00000584773 PBX1P40424 430 aa18.35■□□□□ 0.53
SRSF1-208ENST00000584773 NXPH1P58417 271 aa18.35■□□□□ 0.53
SRSF1-208ENST00000584773 SLC20A2Q08357 652 aa18.35■□□□□ 0.53
SRSF1-208ENST00000584773 ATXN7L2Q5T6C5 722 aaPredicted RBP18.35■□□□□ 0.53
SRSF1-208ENST00000584773 SEL1L3Q68CR1 1132 aa18.35■□□□□ 0.53
SRSF1-208ENST00000584773 ERN2Q76MJ5 926 aaKnown RBP18.35■□□□□ 0.53
SRSF1-208ENST00000584773 PARS2Q7L3T8 475 aaKnown RBP18.35■□□□□ 0.53
SRSF1-208ENST00000584773 RYBPQ8N488 228 aaPredicted RBP18.35■□□□□ 0.53
SRSF1-208ENST00000584773 HMCESQ96FZ2 354 aa18.35■□□□□ 0.53
SRSF1-208ENST00000584773 ELF4Q99607 663 aaPredicted RBP18.35■□□□□ 0.53
SRSF1-208ENST00000584773 HEPHQ9BQS7 1158 aa18.35■□□□□ 0.53
SRSF1-208ENST00000584773 MAGEH1Q9H213 219 aa18.35■□□□□ 0.53
SRSF1-208ENST00000584773 PREBQ9HCU5 417 aa18.35■□□□□ 0.53
SRSF1-208ENST00000584773 DYRK4Q9NR20 520 aa18.35■□□□□ 0.53
SRSF1-208ENST00000584773 TOR4AQ9NXH8 423 aa18.35■□□□□ 0.53
SRSF1-208ENST00000584773 PCSK1NQ9UHG2 260 aa18.35■□□□□ 0.53
SRSF1-208ENST00000584773 TRPM6Q9BX84 2022 aa18.35■□□□□ 0.53
SRSF1-208ENST00000584773 TLR4O00206 839 aa18.34■□□□□ 0.53
SRSF1-208ENST00000584773 KRT37O76014 449 aa18.34■□□□□ 0.53
SRSF1-208ENST00000584773 ATXN1LP0C7T5 689 aaKnown RBP18.34■□□□□ 0.53
SRSF1-208ENST00000584773 HNRNPDQ14103 355 aaKnown RBP18.34■□□□□ 0.53
SRSF1-208ENST00000584773 ZNF284Q2VY69 593 aa18.34■□□□□ 0.53
SRSF1-208ENST00000584773 UNQ6494/PRO21346Q6UXR6 183 aa18.34■□□□□ 0.53
SRSF1-208ENST00000584773 RAB44Q7Z6P3 723 aaPredicted RBP18.34■□□□□ 0.53
SRSF1-208ENST00000584773 ZNF653Q96CK0 615 aa18.34■□□□□ 0.53
SRSF1-208ENST00000584773 VCPIP1Q96JH7 1222 aa18.34■□□□□ 0.53
SRSF1-208ENST00000584773 PARVAQ9NVD7 372 aa18.34■□□□□ 0.53
SRSF1-208ENST00000584773 MYO1AQ9UBC5 1043 aa18.34■□□□□ 0.53
SRSF1-208ENST00000584773 CNOT8Q9UFF9 292 aaKnown RBP18.34■□□□□ 0.53
SRSF1-208ENST00000584773 AP4E1Q9UPM8 1137 aa18.34■□□□□ 0.53
SRSF1-208ENST00000584773 IGF2RP11717 2491 aa18.34■□□□□ 0.53
SRSF1-208ENST00000584773 KMT2BQ9UMN6 2715 aaPredicted RBP18.33■□□□□ 0.53
SRSF1-208ENST00000584773 PTPRBP23467 1997 aa18.33■□□□□ 0.53
SRSF1-208ENST00000584773 TMEM191CA6NGB0 347 aa18.33■□□□□ 0.53
SRSF1-208ENST00000584773 RASA4BC9J798 803 aa18.33■□□□□ 0.53
SRSF1-208ENST00000584773 RASA4O43374 803 aa18.33■□□□□ 0.53
SRSF1-208ENST00000584773 BUB1O43683 1085 aa18.33■□□□□ 0.53
SRSF1-208ENST00000584773 KDELR3O43731 214 aa18.33■□□□□ 0.53
SRSF1-208ENST00000584773 TMCC1O94876 653 aa18.33■□□□□ 0.53
SRSF1-208ENST00000584773 PCDH8O95206 1070 aa18.33■□□□□ 0.53
SRSF1-208ENST00000584773 ETFBP38117 255 aa18.33■□□□□ 0.53
SRSF1-208ENST00000584773 ABL2P42684 1182 aa18.33■□□□□ 0.53
SRSF1-208ENST00000584773 UBASH3AP57075 661 aa18.33■□□□□ 0.53
SRSF1-208ENST00000584773 BNIP3Q12983 259 aa18.33■□□□□ 0.53
SRSF1-208ENST00000584773 ZSCAN23Q3MJ62 389 aa18.33■□□□□ 0.53
SRSF1-208ENST00000584773 SETMARQ53H47 684 aaPredicted RBP18.33■□□□□ 0.53
SRSF1-208ENST00000584773 HGSNATQ68CP4 663 aa18.33■□□□□ 0.53
SRSF1-208ENST00000584773 CYP4V2Q6ZWL3 525 aaPredicted RBP18.33■□□□□ 0.53
SRSF1-208ENST00000584773 HORMAD1Q86X24 394 aa18.33■□□□□ 0.53
SRSF1-208ENST00000584773 CPLX3Q8WVH0 158 aa18.33■□□□□ 0.53
SRSF1-208ENST00000584773 GATA6Q92908 595 aa18.33■□□□□ 0.53
SRSF1-208ENST00000584773 KCTD15Q96SI1 283 aaPredicted RBP18.33■□□□□ 0.53
SRSF1-208ENST00000584773 EPAS1Q99814 870 aa18.33■□□□□ 0.53
SRSF1-208ENST00000584773 SNRNP25Q9BV90 132 aaKnown RBP18.33■□□□□ 0.53
SRSF1-208ENST00000584773 HDAC8Q9BY41 377 aa18.33■□□□□ 0.53
SRSF1-208ENST00000584773 DHX35Q9H5Z1 703 aaKnown RBP18.33■□□□□ 0.53
SRSF1-208ENST00000584773 GDF3Q9NR23 364 aa18.33■□□□□ 0.53
SRSF1-208ENST00000584773 GGT7Q9UJ14 662 aa18.33■□□□□ 0.53
SRSF1-208ENST00000584773 ITM2BQ9Y287 266 aa18.33■□□□□ 0.53
SRSF1-208ENST00000584773 PLXNB3Q9ULL4 1909 aa18.33■□□□□ 0.52
SRSF1-208ENST00000584773 KRIT1O00522 736 aa18.32■□□□□ 0.52
SRSF1-208ENST00000584773 PCDHGA12O60330 932 aa18.32■□□□□ 0.52
SRSF1-208ENST00000584773 ADRB3P13945 408 aa18.32■□□□□ 0.52
SRSF1-208ENST00000584773 ITGB7P26010 798 aa18.32■□□□□ 0.52
SRSF1-208ENST00000584773 NEK3P51956 506 aa18.32■□□□□ 0.52
SRSF1-208ENST00000584773 CLDN2P57739 230 aa18.32■□□□□ 0.52
SRSF1-208ENST00000584773 TPI1P60174 286 aa18.32■□□□□ 0.52
SRSF1-208ENST00000584773 FGL2Q14314 439 aa18.32■□□□□ 0.52
SRSF1-208ENST00000584773 SUZ12Q15022 739 aaKnown RBP18.32■□□□□ 0.52
SRSF1-208ENST00000584773 CCDC157Q569K6 752 aa18.32■□□□□ 0.52
SRSF1-208ENST00000584773 TDRD12Q587J7 1177 aaKnown RBP18.32■□□□□ 0.52
SRSF1-208ENST00000584773 FIGNQ5HY92 759 aa18.32■□□□□ 0.52
SRSF1-208ENST00000584773 LRRC73Q5JTD7 316 aa18.32■□□□□ 0.52
SRSF1-208ENST00000584773 KDM7AQ6ZMT4 941 aa18.32■□□□□ 0.52
SRSF1-208ENST00000584773 GLRX5Q86SX6 157 aa18.32■□□□□ 0.52
SRSF1-208ENST00000584773 MARCH9Q86YJ5 346 aa18.32■□□□□ 0.52
SRSF1-208ENST00000584773 MFSD2AQ8NA29 543 aa18.32■□□□□ 0.52
SRSF1-208ENST00000584773 OR2AP1Q8NGE2 309 aa18.32■□□□□ 0.52
SRSF1-208ENST00000584773 ISG20Q96AZ6 181 aaKnown RBP18.32■□□□□ 0.52
SRSF1-208ENST00000584773 SKA1Q96BD8 255 aa18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms