RNA–Protein interactions for RNA: ENST00000581660.5

CSNK1D-219, Transcript of casein kinase 1 delta, humanhuman

TSL 5

Gene CSNK1D, Length 611 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-219ENST00000581660 CLEC4CQ8WTT0 213 aa14.15□□□□□ -0.14
CSNK1D-219ENST00000581660 ASB12Q8WXK4 309 aa14.15□□□□□ -0.14
CSNK1D-219ENST00000581660 USP7Q93009 1102 aa14.15□□□□□ -0.14
CSNK1D-219ENST00000581660 RNF34Q969K3 372 aa14.15□□□□□ -0.14
CSNK1D-219ENST00000581660 EEF2KMTQ96G04 330 aa14.15□□□□□ -0.14
CSNK1D-219ENST00000581660 CCDC114Q96M63 670 aa14.15□□□□□ -0.14
CSNK1D-219ENST00000581660 C1QTNF2Q9BXJ5 285 aa14.15□□□□□ -0.14
CSNK1D-219ENST00000581660 CLPBQ9H078 707 aa14.15□□□□□ -0.14
CSNK1D-219ENST00000581660 TMPRSS4Q9NRS4 437 aa14.15□□□□□ -0.14
CSNK1D-219ENST00000581660 KIAA1257Q9ULG3 409 aa14.15□□□□□ -0.14
CSNK1D-219ENST00000581660 PNMA8BQ9ULN7 279 aaPredicted RBP14.15□□□□□ -0.14
CSNK1D-219ENST00000581660 TRAF3IP3Q9Y228 551 aa14.15□□□□□ -0.14
CSNK1D-219ENST00000581660 FARP1Q9Y4F1 1045 aaPredicted RBP14.15□□□□□ -0.14
CSNK1D-219ENST00000581660 SPTLC2O15270 562 aa14.14□□□□□ -0.15
CSNK1D-219ENST00000581660 AP1G1O43747 822 aa14.14□□□□□ -0.15
CSNK1D-219ENST00000581660 KLRC4O43908 158 aa14.14□□□□□ -0.15
CSNK1D-219ENST00000581660 BNIP3LO60238 219 aa14.14□□□□□ -0.15
CSNK1D-219ENST00000581660 IGLV3-25P01717 112 aa14.14□□□□□ -0.15
CSNK1D-219ENST00000581660 VDRP11473 427 aa14.14□□□□□ -0.15
CSNK1D-219ENST00000581660 SRCP12931 536 aa14.14□□□□□ -0.15
CSNK1D-219ENST00000581660 CD19P15391 556 aa14.14□□□□□ -0.15
CSNK1D-219ENST00000581660 TSHRP16473 764 aa14.14□□□□□ -0.15
CSNK1D-219ENST00000581660 ITGB7P26010 798 aa14.14□□□□□ -0.15
CSNK1D-219ENST00000581660 NOS2P35228 1153 aa14.14□□□□□ -0.15
CSNK1D-219ENST00000581660 RGS7P49802 495 aa14.14□□□□□ -0.15
CSNK1D-219ENST00000581660 C1orf61Q13536 156 aa14.14□□□□□ -0.15
CSNK1D-219ENST00000581660 NFIL3Q16649 462 aa14.14□□□□□ -0.15
CSNK1D-219ENST00000581660 RABGAP1LQ5R372 815 aa14.14□□□□□ -0.15
CSNK1D-219ENST00000581660 LVRNQ6Q4G3 990 aa14.14□□□□□ -0.15
CSNK1D-219ENST00000581660 FBXL13Q8NEE6 735 aa14.14□□□□□ -0.15
CSNK1D-219ENST00000581660 OR52K2Q8NGK3 314 aa14.14□□□□□ -0.15
CSNK1D-219ENST00000581660 C9orf43Q8TAL5 461 aaPredicted RBP14.14□□□□□ -0.15
CSNK1D-219ENST00000581660 PPP1R16AQ96I34 528 aa14.14□□□□□ -0.15
CSNK1D-219ENST00000581660 FEM1CQ96JP0 617 aa14.14□□□□□ -0.15
CSNK1D-219ENST00000581660 HSFY1Q96LI6 401 aa14.14□□□□□ -0.15
CSNK1D-219ENST00000581660 CATSPER2Q96P56 530 aa14.14□□□□□ -0.15
CSNK1D-219ENST00000581660 CPEB1Q9BZB8 566 aaKnown RBP14.14□□□□□ -0.15
CSNK1D-219ENST00000581660 LRRN3Q9H3W5 708 aa14.14□□□□□ -0.15
CSNK1D-219ENST00000581660 FADS3Q9Y5Q0 445 aa14.14□□□□□ -0.15
CSNK1D-219ENST00000581660 ITPR3Q14573 2671 aa14.13□□□□□ -0.15
CSNK1D-219ENST00000581660 STMND1H3BQB6 276 aa14.13□□□□□ -0.15
CSNK1D-219ENST00000581660 KRT13P13646 458 aa14.13□□□□□ -0.15
CSNK1D-219ENST00000581660 PDIA4P13667 645 aaKnown RBP14.13□□□□□ -0.15
CSNK1D-219ENST00000581660 ADRB3P13945 408 aa14.13□□□□□ -0.15
CSNK1D-219ENST00000581660 PDCP20941 246 aa14.13□□□□□ -0.15
CSNK1D-219ENST00000581660 NEK3P51956 506 aa14.13□□□□□ -0.15
CSNK1D-219ENST00000581660 PTK2BQ14289 1009 aa14.13□□□□□ -0.15
CSNK1D-219ENST00000581660 ZC3H12AQ5D1E8 599 aaKnown RBP14.13□□□□□ -0.15
CSNK1D-219ENST00000581660 SHC4Q6S5L8 630 aa14.13□□□□□ -0.15
CSNK1D-219ENST00000581660 FSTL5Q8N475 847 aaPredicted RBP14.13□□□□□ -0.15
CSNK1D-219ENST00000581660 CHST14Q8NCH0 376 aa14.13□□□□□ -0.15
CSNK1D-219ENST00000581660 LINC00301Q8NCQ3 95 aa14.13□□□□□ -0.15
CSNK1D-219ENST00000581660 OR6C4Q8NGE1 309 aa14.13□□□□□ -0.15
CSNK1D-219ENST00000581660 CMKLR1Q99788 373 aa14.13□□□□□ -0.15
CSNK1D-219ENST00000581660 SLC13A1Q9BZW2 595 aa14.13□□□□□ -0.15
CSNK1D-219ENST00000581660 MMRN2Q9H8L6 949 aa14.13□□□□□ -0.15
CSNK1D-219ENST00000581660 RAB20Q9NX57 234 aa14.13□□□□□ -0.15
CSNK1D-219ENST00000581660 VPS28Q9UK41 221 aa14.13□□□□□ -0.15
CSNK1D-219ENST00000581660 MTMR6Q9Y217 621 aa14.13□□□□□ -0.15
CSNK1D-219ENST00000581660 KCNU1A8MYU2 1149 aa14.12□□□□□ -0.15
CSNK1D-219ENST00000581660 PIK3R2O00459 728 aa14.12□□□□□ -0.15
CSNK1D-219ENST00000581660 CALUO43852 315 aaPredicted RBP14.12□□□□□ -0.15
CSNK1D-219ENST00000581660 MT-CO1P00395 513 aa14.12□□□□□ -0.15
CSNK1D-219ENST00000581660 NR2F2P24468 414 aa14.12□□□□□ -0.15
CSNK1D-219ENST00000581660 RECQLP46063 649 aaPredicted RBP14.12□□□□□ -0.15
CSNK1D-219ENST00000581660 MXI1P50539 228 aa14.12□□□□□ -0.15
CSNK1D-219ENST00000581660 ATP1A2P50993 1020 aa14.12□□□□□ -0.15
CSNK1D-219ENST00000581660 CLCN6P51797 869 aa14.12□□□□□ -0.15
CSNK1D-219ENST00000581660 EIF4EBP2Q13542 120 aaPredicted RBP14.12□□□□□ -0.15
CSNK1D-219ENST00000581660 CUL2Q13617 745 aa14.12□□□□□ -0.15
CSNK1D-219ENST00000581660 CCNJLQ8IV13 435 aa14.12□□□□□ -0.15
CSNK1D-219ENST00000581660 SLITRK4Q8IW52 837 aa14.12□□□□□ -0.15
CSNK1D-219ENST00000581660 FAM186BQ8IYM0 893 aa14.12□□□□□ -0.15
CSNK1D-219ENST00000581660 UBR7Q8N806 425 aa14.12□□□□□ -0.15
CSNK1D-219ENST00000581660 PCDH19Q8TAB3 1148 aa14.12□□□□□ -0.15
CSNK1D-219ENST00000581660 GRIN3AQ8TCU5 1115 aa14.12□□□□□ -0.15
CSNK1D-219ENST00000581660 GPBAR1Q8TDU6 330 aa14.12□□□□□ -0.15
CSNK1D-219ENST00000581660 NKD1Q969G9 470 aa14.12□□□□□ -0.15
CSNK1D-219ENST00000581660 ZNF71Q9NQZ8 489 aaPredicted RBP14.12□□□□□ -0.15
CSNK1D-219ENST00000581660 GULP1Q9UBP9 304 aa14.12□□□□□ -0.15
CSNK1D-219ENST00000581660 IL36AQ9UHA7 158 aa14.12□□□□□ -0.15
CSNK1D-219ENST00000581660 APPL1Q9UKG1 709 aa14.12□□□□□ -0.15
CSNK1D-219ENST00000581660 SRPK3Q9UPE1 567 aa14.12□□□□□ -0.15
CSNK1D-219ENST00000581660 TBC1D30Q9Y2I9 924 aa14.12□□□□□ -0.15
CSNK1D-219ENST00000581660 WASF2Q9Y6W5 498 aa14.12□□□□□ -0.15
CSNK1D-219ENST00000581660 M0QYT0 321 aa14.11□□□□□ -0.15
CSNK1D-219ENST00000581660 POLR2DO15514 142 aaKnown RBP14.11□□□□□ -0.15
CSNK1D-219ENST00000581660 SART1O43290 800 aaKnown RBP14.11□□□□□ -0.15
CSNK1D-219ENST00000581660 PPP6R2O75170 966 aa14.11□□□□□ -0.15
CSNK1D-219ENST00000581660 AGFG2O95081 481 aa14.11□□□□□ -0.15
CSNK1D-219ENST00000581660 CELA2BP08218 269 aaPredicted RBP14.11□□□□□ -0.15
CSNK1D-219ENST00000581660 RPL34P49207 117 aaKnown RBP14.11□□□□□ -0.15
CSNK1D-219ENST00000581660 THOP1P52888 689 aa14.11□□□□□ -0.15
CSNK1D-219ENST00000581660 MAPK10P53779 464 aa14.11□□□□□ -0.15
CSNK1D-219ENST00000581660 YPEL5P62699 121 aa14.11□□□□□ -0.15
CSNK1D-219ENST00000581660 SGCGQ13326 291 aa14.11□□□□□ -0.15
CSNK1D-219ENST00000581660 STK38Q15208 465 aa14.11□□□□□ -0.15
CSNK1D-219ENST00000581660 ARSIQ5FYB1 569 aa14.11□□□□□ -0.15
CSNK1D-219ENST00000581660 TMEM164Q5U3C3 297 aa14.11□□□□□ -0.15
CSNK1D-219ENST00000581660 SYPL2Q5VXT5 272 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms