RNA–Protein interactions for RNA: ENST00000579853.5

CDK5RAP3-216, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 714 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-216ENST00000579853 MUSKO15146 869 aa12.47□□□□□ -0.41
CDK5RAP3-216ENST00000579853 P4HA2O15460 535 aa12.47□□□□□ -0.41
CDK5RAP3-216ENST00000579853 SUV39H1O43463 412 aa12.47□□□□□ -0.41
CDK5RAP3-216ENST00000579853 MED7O43513 233 aa12.47□□□□□ -0.41
CDK5RAP3-216ENST00000579853 AP1G1O43747 822 aa12.47□□□□□ -0.41
CDK5RAP3-216ENST00000579853 PAK4O96013 591 aaPredicted RBP12.47□□□□□ -0.41
CDK5RAP3-216ENST00000579853 AFPP02771 609 aaKnown RBP12.47□□□□□ -0.41
CDK5RAP3-216ENST00000579853 CENPBP07199 599 aaPredicted RBP12.47□□□□□ -0.41
CDK5RAP3-216ENST00000579853 GLI1P08151 1106 aa12.47□□□□□ -0.41
CDK5RAP3-216ENST00000579853 FMO5P49326 533 aa12.47□□□□□ -0.41
CDK5RAP3-216ENST00000579853 CENPCQ03188 943 aa12.47□□□□□ -0.41
CDK5RAP3-216ENST00000579853 LRRC63Q05C16 580 aa12.47□□□□□ -0.41
CDK5RAP3-216ENST00000579853 PDE1CQ14123 709 aaPredicted RBP12.47□□□□□ -0.41
CDK5RAP3-216ENST00000579853 COLEC12Q5KU26 742 aa12.47□□□□□ -0.41
CDK5RAP3-216ENST00000579853 ESRP1Q6NXG1 681 aaKnown RBP12.47□□□□□ -0.41
CDK5RAP3-216ENST00000579853 C14orf80Q86SX3 495 aa12.47□□□□□ -0.41
CDK5RAP3-216ENST00000579853 SETD3Q86TU7 594 aaPredicted RBP12.47□□□□□ -0.41
CDK5RAP3-216ENST00000579853 ZSCAN1Q8NBB4 408 aa12.47□□□□□ -0.41
CDK5RAP3-216ENST00000579853 DENND6BQ8NEG7 585 aa12.47□□□□□ -0.41
CDK5RAP3-216ENST00000579853 ASB12Q8WXK4 309 aa12.47□□□□□ -0.41
CDK5RAP3-216ENST00000579853 SPATA32Q96LK8 384 aa12.47□□□□□ -0.41
CDK5RAP3-216ENST00000579853 GTPBP4Q9BZE4 634 aaKnown RBP12.47□□□□□ -0.41
CDK5RAP3-216ENST00000579853 TRIM4Q9C037 500 aa12.47□□□□□ -0.41
CDK5RAP3-216ENST00000579853 STRADBQ9C0K7 418 aa12.47□□□□□ -0.41
CDK5RAP3-216ENST00000579853 WDR70Q9NW82 654 aa12.47□□□□□ -0.41
CDK5RAP3-216ENST00000579853 ASNSD1Q9NWL6 643 aa12.47□□□□□ -0.41
CDK5RAP3-216ENST00000579853 SEPT10Q9P0V9 454 aa12.47□□□□□ -0.41
CDK5RAP3-216ENST00000579853 VANGL2Q9ULK5 521 aa12.47□□□□□ -0.41
CDK5RAP3-216ENST00000579853 E5RJQ4 531 aa12.46□□□□□ -0.41
CDK5RAP3-216ENST00000579853 LMO7DNF2Z398 122 aa12.46□□□□□ -0.41
CDK5RAP3-216ENST00000579853 M0QYT0 321 aa12.46□□□□□ -0.41
CDK5RAP3-216ENST00000579853 MT-CO1P00395 513 aa12.46□□□□□ -0.41
CDK5RAP3-216ENST00000579853 HSP90AA1P07900 732 aaKnown RBP12.46□□□□□ -0.41
CDK5RAP3-216ENST00000579853 ANXA6P08133 673 aa12.46□□□□□ -0.41
CDK5RAP3-216ENST00000579853 ADRB3P13945 408 aa12.46□□□□□ -0.41
CDK5RAP3-216ENST00000579853 ITGB7P26010 798 aa12.46□□□□□ -0.41
CDK5RAP3-216ENST00000579853 SLC5A2P31639 672 aa12.46□□□□□ -0.41
CDK5RAP3-216ENST00000579853 NDUFA8P51970 172 aa12.46□□□□□ -0.41
CDK5RAP3-216ENST00000579853 THOP1P52888 689 aa12.46□□□□□ -0.41
CDK5RAP3-216ENST00000579853 SLC20A2Q08357 652 aa12.46□□□□□ -0.41
CDK5RAP3-216ENST00000579853 LINC00303Q3SY05 128 aa12.46□□□□□ -0.41
CDK5RAP3-216ENST00000579853 C5orf22Q49AR2 442 aa12.46□□□□□ -0.41
CDK5RAP3-216ENST00000579853 COBLL1Q53SF7 1204 aa12.46□□□□□ -0.41
CDK5RAP3-216ENST00000579853 ARSIQ5FYB1 569 aa12.46□□□□□ -0.41
CDK5RAP3-216ENST00000579853 EFHC1Q5JVL4 640 aa12.46□□□□□ -0.41
CDK5RAP3-216ENST00000579853 PERM1Q5SV97 790 aa12.46□□□□□ -0.41
CDK5RAP3-216ENST00000579853 ACBD5Q5T8D3 534 aaPredicted RBP12.46□□□□□ -0.41
CDK5RAP3-216ENST00000579853 RAB11FIP2Q7L804 512 aa12.46□□□□□ -0.41
CDK5RAP3-216ENST00000579853 LURAP1LQ8IV03 231 aa12.46□□□□□ -0.41
CDK5RAP3-216ENST00000579853 FBXO39Q8N4B4 442 aa12.46□□□□□ -0.41
CDK5RAP3-216ENST00000579853 DCAF4L2Q8NA75 395 aa12.46□□□□□ -0.41
CDK5RAP3-216ENST00000579853 SCG3Q8WXD2 468 aaKnown RBP12.46□□□□□ -0.41
CDK5RAP3-216ENST00000579853 CCDC3Q9BQI4 270 aa12.46□□□□□ -0.41
CDK5RAP3-216ENST00000579853 TMEM51Q9NW97 253 aa12.46□□□□□ -0.41
CDK5RAP3-216ENST00000579853 APOBEC3BQ9UH17 382 aaKnown RBP12.46□□□□□ -0.41
CDK5RAP3-216ENST00000579853 NTN3O00634 580 aaPredicted RBP12.45□□□□□ -0.42
CDK5RAP3-216ENST00000579853 TOR1BO14657 336 aa12.45□□□□□ -0.42
CDK5RAP3-216ENST00000579853 NVLO15381 856 aaKnown RBP12.45□□□□□ -0.42
CDK5RAP3-216ENST00000579853 EFSO43281 561 aa12.45□□□□□ -0.42
CDK5RAP3-216ENST00000579853 TSPAN6O43657 245 aa12.45□□□□□ -0.42
CDK5RAP3-216ENST00000579853 HSF2BPO75031 334 aa12.45□□□□□ -0.42
CDK5RAP3-216ENST00000579853 PPFIA2O75334 1257 aa12.45□□□□□ -0.42
CDK5RAP3-216ENST00000579853 LEFTY1O75610 366 aa12.45□□□□□ -0.42
CDK5RAP3-216ENST00000579853 RHOCP08134 193 aa12.45□□□□□ -0.42
CDK5RAP3-216ENST00000579853 LIPCP11150 499 aa12.45□□□□□ -0.42
CDK5RAP3-216ENST00000579853 KRT10P13645 584 aa12.45□□□□□ -0.42
CDK5RAP3-216ENST00000579853 RRM1P23921 792 aa12.45□□□□□ -0.42
CDK5RAP3-216ENST00000579853 L1CAMP32004 1257 aa12.45□□□□□ -0.42
CDK5RAP3-216ENST00000579853 PRRT3Q5FWE3 981 aa12.45□□□□□ -0.42
CDK5RAP3-216ENST00000579853 RETSATQ6NUM9 610 aa12.45□□□□□ -0.42
CDK5RAP3-216ENST00000579853 C22orf39Q6P5X5 142 aa12.45□□□□□ -0.42
CDK5RAP3-216ENST00000579853 CRTC1Q6UUV9 634 aa12.45□□□□□ -0.42
CDK5RAP3-216ENST00000579853 SLC35F3Q8IY50 421 aa12.45□□□□□ -0.42
CDK5RAP3-216ENST00000579853 SMYD4Q8IYR2 804 aaPredicted RBP12.45□□□□□ -0.42
CDK5RAP3-216ENST00000579853 OR6C4Q8NGE1 309 aa12.45□□□□□ -0.42
CDK5RAP3-216ENST00000579853 OR52K2Q8NGK3 314 aa12.45□□□□□ -0.42
CDK5RAP3-216ENST00000579853 GRIN3AQ8TCU5 1115 aa12.45□□□□□ -0.42
CDK5RAP3-216ENST00000579853 EXTL1Q92935 676 aa12.45□□□□□ -0.42
CDK5RAP3-216ENST00000579853 RAB7BQ96AH8 199 aa12.45□□□□□ -0.42
CDK5RAP3-216ENST00000579853 ARHGEF26Q96DR7 871 aa12.45□□□□□ -0.42
CDK5RAP3-216ENST00000579853 SLC2A13Q96QE2 648 aa12.45□□□□□ -0.42
CDK5RAP3-216ENST00000579853 C1QTNF2Q9BXJ5 285 aa12.45□□□□□ -0.42
CDK5RAP3-216ENST00000579853 SLC13A1Q9BZW2 595 aa12.45□□□□□ -0.42
CDK5RAP3-216ENST00000579853 CEP44Q9C0F1 390 aa12.45□□□□□ -0.42
CDK5RAP3-216ENST00000579853 VPS51Q9UID3 782 aa12.45□□□□□ -0.42
CDK5RAP3-216ENST00000579853 KLF15Q9UIH9 416 aa12.45□□□□□ -0.42
CDK5RAP3-216ENST00000579853 PADI4Q9UM07 663 aa12.45□□□□□ -0.42
CDK5RAP3-216ENST00000579853 CNTN6Q9UQ52 1028 aa12.45□□□□□ -0.42
CDK5RAP3-216ENST00000579853 FADS3Q9Y5Q0 445 aa12.45□□□□□ -0.42
CDK5RAP3-216ENST00000579853 HS3ST4Q9Y661 456 aa12.45□□□□□ -0.42
CDK5RAP3-216ENST00000579853 SYNJ2BP-COX16A0A087WUM0 186 aa12.44□□□□□ -0.42
CDK5RAP3-216ENST00000579853 ATMINO43313 823 aaPredicted RBP12.44□□□□□ -0.42
CDK5RAP3-216ENST00000579853 SMAD6O43541 496 aaKnown RBP12.44□□□□□ -0.42
CDK5RAP3-216ENST00000579853 SNAP91O60641 907 aa12.44□□□□□ -0.42
CDK5RAP3-216ENST00000579853 ITGB6P18564 788 aa12.44□□□□□ -0.42
CDK5RAP3-216ENST00000579853 UGT1A5P35504 534 aa12.44□□□□□ -0.42
CDK5RAP3-216ENST00000579853 PRCPP42785 496 aa12.44□□□□□ -0.42
CDK5RAP3-216ENST00000579853 BLKP51451 505 aa12.44□□□□□ -0.42
CDK5RAP3-216ENST00000579853 PDX1P52945 283 aa12.44□□□□□ -0.42
CDK5RAP3-216ENST00000579853 SNX16P57768 344 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms