RNA–Protein interactions for RNA: ENST00000570871.2

PCDHB19P-201, Transcript of protocadherin beta 19 pseudogene, humanhuman

BASIC

Gene PCDHB19P, Length 2,371 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB19P-201ENST00000570871 RBPJLQ9UBG7 517 aa17.13■□□□□ 0.33
PCDHB19P-201ENST00000570871 A0A1B0GTW7 788 aa17.13■□□□□ 0.33
PCDHB19P-201ENST00000570871 ERI2A8K979 691 aaKnown RBP17.13■□□□□ 0.33
PCDHB19P-201ENST00000570871 TARM1B6A8C7 271 aa17.13■□□□□ 0.33
PCDHB19P-201ENST00000570871 SLCO1B7G3V0H7 640 aa17.13■□□□□ 0.33
PCDHB19P-201ENST00000570871 CLDN5O00501 218 aa17.13■□□□□ 0.33
PCDHB19P-201ENST00000570871 HNRNPRO43390 633 aaKnown RBP17.13■□□□□ 0.33
PCDHB19P-201ENST00000570871 TRPA1O75762 1119 aa17.13■□□□□ 0.33
PCDHB19P-201ENST00000570871 ADRA1BP35368 520 aa17.13■□□□□ 0.33
PCDHB19P-201ENST00000570871 HADHAP40939 763 aa17.13■□□□□ 0.33
PCDHB19P-201ENST00000570871 TMEM62Q0P6H9 643 aa17.13■□□□□ 0.33
PCDHB19P-201ENST00000570871 IL23RQ5VWK5 629 aa17.13■□□□□ 0.33
PCDHB19P-201ENST00000570871 CNTD1Q8N815 330 aa17.13■□□□□ 0.33
PCDHB19P-201ENST00000570871 SLC10A4Q96EP9 437 aa17.13■□□□□ 0.33
PCDHB19P-201ENST00000570871 MRPL1Q9BYD6 325 aaKnown RBP17.13■□□□□ 0.33
PCDHB19P-201ENST00000570871 SLC2A11Q9BYW1 496 aa17.13■□□□□ 0.33
PCDHB19P-201ENST00000570871 NXF3Q9H4D5 531 aaKnown RBP17.13■□□□□ 0.33
PCDHB19P-201ENST00000570871 RHOJQ9H4E5 214 aa17.13■□□□□ 0.33
PCDHB19P-201ENST00000570871 PREBQ9HCU5 417 aa17.13■□□□□ 0.33
PCDHB19P-201ENST00000570871 STAP1Q9ULZ2 295 aa17.13■□□□□ 0.33
PCDHB19P-201ENST00000570871 KCNH4Q9UQ05 1017 aa17.13■□□□□ 0.33
PCDHB19P-201ENST00000570871 CELF2O95319 508 aaKnown RBP17.12■□□□□ 0.33
PCDHB19P-201ENST00000570871 PTPN1P18031 435 aaKnown RBP17.12■□□□□ 0.33
PCDHB19P-201ENST00000570871 GABRB3P28472 473 aa17.12■□□□□ 0.33
PCDHB19P-201ENST00000570871 CLCN2P51788 898 aa17.12■□□□□ 0.33
PCDHB19P-201ENST00000570871 PRKAA2P54646 552 aa17.12■□□□□ 0.33
PCDHB19P-201ENST00000570871 CREB5Q02930 508 aa17.12■□□□□ 0.33
PCDHB19P-201ENST00000570871 PPIL2Q13356 520 aa17.12■□□□□ 0.33
PCDHB19P-201ENST00000570871 PTK2BQ14289 1009 aa17.12■□□□□ 0.33
PCDHB19P-201ENST00000570871 ZNF460Q14592 562 aa17.12■□□□□ 0.33
PCDHB19P-201ENST00000570871 CST9Q5W186 159 aa17.12■□□□□ 0.33
PCDHB19P-201ENST00000570871 LRRC8EQ6NSJ5 796 aa17.12■□□□□ 0.33
PCDHB19P-201ENST00000570871 PDZD4Q76G19 769 aaPredicted RBP17.12■□□□□ 0.33
PCDHB19P-201ENST00000570871 AMIGO2Q86SJ2 522 aa17.12■□□□□ 0.33
PCDHB19P-201ENST00000570871 SLC41A1Q8IVJ1 513 aa17.12■□□□□ 0.33
PCDHB19P-201ENST00000570871 CCNYL1Q8N7R7 359 aa17.12■□□□□ 0.33
PCDHB19P-201ENST00000570871 KDM1BQ8NB78 822 aa17.12■□□□□ 0.33
PCDHB19P-201ENST00000570871 ATP6V1E2Q96A05 226 aa17.12■□□□□ 0.33
PCDHB19P-201ENST00000570871 UNKQ9C0B0 810 aaKnown RBP17.12■□□□□ 0.33
PCDHB19P-201ENST00000570871 SUDS3Q9H7L9 328 aaPredicted RBP17.12■□□□□ 0.33
PCDHB19P-201ENST00000570871 IRAK4Q9NWZ3 460 aa17.12■□□□□ 0.33
PCDHB19P-201ENST00000570871 XPR1Q9UBH6 696 aa17.12■□□□□ 0.33
PCDHB19P-201ENST00000570871 PIRO00625 290 aa17.11■□□□□ 0.33
PCDHB19P-201ENST00000570871 RECQL4O94761 1208 aa17.11■□□□□ 0.33
PCDHB19P-201ENST00000570871 ZNF26P17031 533 aaPredicted RBP17.11■□□□□ 0.33
PCDHB19P-201ENST00000570871 AKAP5P24588 427 aa17.11■□□□□ 0.33
PCDHB19P-201ENST00000570871 PCSK6P29122 969 aa17.11■□□□□ 0.33
PCDHB19P-201ENST00000570871 TPI1P60174 286 aa17.11■□□□□ 0.33
PCDHB19P-201ENST00000570871 SLC12A1Q13621 1099 aa17.11■□□□□ 0.33
PCDHB19P-201ENST00000570871 LAMC2Q13753 1193 aa17.11■□□□□ 0.33
PCDHB19P-201ENST00000570871 MARCH8Q5T0T0 291 aa17.11■□□□□ 0.33
PCDHB19P-201ENST00000570871 SLC27A1Q6PCB7 646 aa17.11■□□□□ 0.33
PCDHB19P-201ENST00000570871 GK5Q6ZS86 529 aa17.11■□□□□ 0.33
PCDHB19P-201ENST00000570871 SPATA6LQ8N4H0 392 aa17.11■□□□□ 0.33
PCDHB19P-201ENST00000570871 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP17.11■□□□□ 0.33
PCDHB19P-201ENST00000570871 APPL2Q8NEU8 664 aa17.11■□□□□ 0.33
PCDHB19P-201ENST00000570871 STON2Q8WXE9 905 aa17.11■□□□□ 0.33
PCDHB19P-201ENST00000570871 OMDQ99983 421 aa17.11■□□□□ 0.33
PCDHB19P-201ENST00000570871 DUSP16Q9BY84 665 aa17.11■□□□□ 0.33
PCDHB19P-201ENST00000570871 ADA2Q9NZK5 511 aa17.11■□□□□ 0.33
PCDHB19P-201ENST00000570871 COL1A2P08123 1366 aa17.11■□□□□ 0.33
PCDHB19P-201ENST00000570871 TRIM38O00635 465 aa17.11■□□□□ 0.33
PCDHB19P-201ENST00000570871 AHSGP02765 367 aa17.11■□□□□ 0.33
PCDHB19P-201ENST00000570871 NR1H2P55055 460 aa17.11■□□□□ 0.33
PCDHB19P-201ENST00000570871 SEMA3BQ13214 749 aa17.11■□□□□ 0.33
PCDHB19P-201ENST00000570871 NRF1Q16656 503 aa17.11■□□□□ 0.33
PCDHB19P-201ENST00000570871 MGAT5BQ3V5L5 792 aa17.11■□□□□ 0.33
PCDHB19P-201ENST00000570871 ALKAL1Q6UXT8 129 aa17.11■□□□□ 0.33
PCDHB19P-201ENST00000570871 DDI1Q8WTU0 396 aa17.11■□□□□ 0.33
PCDHB19P-201ENST00000570871 SLC2A13Q96QE2 648 aa17.11■□□□□ 0.33
PCDHB19P-201ENST00000570871 C16orf70Q9BSU1 422 aa17.11■□□□□ 0.33
PCDHB19P-201ENST00000570871 GOLGA2P5Q9HBQ8 144 aa17.11■□□□□ 0.33
PCDHB19P-201ENST00000570871 KCNU1A8MYU2 1149 aa17.1■□□□□ 0.33
PCDHB19P-201ENST00000570871 BTBD19C9JJ37 291 aa17.1■□□□□ 0.33
PCDHB19P-201ENST00000570871 H3BSA7 217 aa17.1■□□□□ 0.33
PCDHB19P-201ENST00000570871 CXCL11O14625 94 aa17.1■□□□□ 0.33
PCDHB19P-201ENST00000570871 PGK1P00558 417 aa17.1■□□□□ 0.33
PCDHB19P-201ENST00000570871 CYP2C9P11712 490 aa17.1■□□□□ 0.33
PCDHB19P-201ENST00000570871 TSTD2Q5T7W7 516 aa17.1■□□□□ 0.33
PCDHB19P-201ENST00000570871 ARMCX2Q7L311 632 aa17.1■□□□□ 0.33
PCDHB19P-201ENST00000570871 CATSPER4Q7RTX7 472 aa17.1■□□□□ 0.33
PCDHB19P-201ENST00000570871 PTAR1Q7Z6K3 402 aaPredicted RBP17.1■□□□□ 0.33
PCDHB19P-201ENST00000570871 OSTM1Q86WC4 334 aa17.1■□□□□ 0.33
PCDHB19P-201ENST00000570871 PCDH20Q8N6Y1 951 aaKnown RBP17.1■□□□□ 0.33
PCDHB19P-201ENST00000570871 B3GALNT2Q8NCR0 500 aa17.1■□□□□ 0.33
PCDHB19P-201ENST00000570871 EME1Q96AY2 570 aa17.1■□□□□ 0.33
PCDHB19P-201ENST00000570871 NXNL1Q96CM4 212 aa17.1■□□□□ 0.33
PCDHB19P-201ENST00000570871 SEMA6AQ9H2E6 1030 aa17.1■□□□□ 0.33
PCDHB19P-201ENST00000570871 KLK14Q9P0G3 267 aa17.1■□□□□ 0.33
PCDHB19P-201ENST00000570871 UBQLN1Q9UMX0 589 aaKnown RBP17.1■□□□□ 0.33
PCDHB19P-201ENST00000570871 PCDHGA7Q9Y5G6 932 aa17.1■□□□□ 0.33
PCDHB19P-201ENST00000570871 MYLKQ15746 1914 aa17.1■□□□□ 0.33
PCDHB19P-201ENST00000570871 C7orf72A4D263 438 aa17.1■□□□□ 0.33
PCDHB19P-201ENST00000570871 SDHDO14521 159 aa17.1■□□□□ 0.33
PCDHB19P-201ENST00000570871 NRP1O14786 923 aa17.1■□□□□ 0.33
PCDHB19P-201ENST00000570871 FYNP06241 537 aa17.1■□□□□ 0.33
PCDHB19P-201ENST00000570871 PSMC3P17980 439 aa17.1■□□□□ 0.33
PCDHB19P-201ENST00000570871 SLC5A2P31639 672 aa17.1■□□□□ 0.33
PCDHB19P-201ENST00000570871 RABGGTBP53611 331 aa17.1■□□□□ 0.33
PCDHB19P-201ENST00000570871 PSME3P61289 254 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 80 ms