RNA–Protein interactions for RNA: ENST00000570324.1

NPLOC4-204, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 3

Gene NPLOC4, Length 414 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-204ENST00000570324 DNAJC3Q13217 504 aa9.1□□□□□ -0.95
NPLOC4-204ENST00000570324 SGCGQ13326 291 aa9.1□□□□□ -0.95
NPLOC4-204ENST00000570324 KIAA1161Q6NSJ0 714 aa9.1□□□□□ -0.95
NPLOC4-204ENST00000570324 PPP1R2P3Q6NXS1 205 aa9.1□□□□□ -0.95
NPLOC4-204ENST00000570324 BNIPLQ7Z465 357 aa9.1□□□□□ -0.95
NPLOC4-204ENST00000570324 PROSER1Q86XN7 944 aa9.1□□□□□ -0.95
NPLOC4-204ENST00000570324 SPATS2Q86XZ4 545 aaKnown RBP9.1□□□□□ -0.95
NPLOC4-204ENST00000570324 PHF13Q86YI8 300 aaPredicted RBP9.1□□□□□ -0.95
NPLOC4-204ENST00000570324 CCDC185Q8N715 623 aa9.1□□□□□ -0.95
NPLOC4-204ENST00000570324 FAM174AQ8TBP5 190 aa9.1□□□□□ -0.95
NPLOC4-204ENST00000570324 ARHGEF2Q92974 986 aaKnown RBP9.1□□□□□ -0.95
NPLOC4-204ENST00000570324 NTAN1Q96AB6 310 aa9.1□□□□□ -0.95
NPLOC4-204ENST00000570324 ISG20Q96AZ6 181 aaKnown RBP9.1□□□□□ -0.95
NPLOC4-204ENST00000570324 LRIG1Q96JA1 1093 aa9.1□□□□□ -0.95
NPLOC4-204ENST00000570324 MCEEQ96PE7 176 aa9.1□□□□□ -0.95
NPLOC4-204ENST00000570324 ERGIC2Q96RQ1 377 aa9.1□□□□□ -0.95
NPLOC4-204ENST00000570324 EPAS1Q99814 870 aa9.1□□□□□ -0.95
NPLOC4-204ENST00000570324 HDAC8Q9BY41 377 aa9.1□□□□□ -0.95
NPLOC4-204ENST00000570324 TM6SF2Q9BZW4 377 aa9.1□□□□□ -0.95
NPLOC4-204ENST00000570324 CATSPERBQ9H7T0 1116 aa9.1□□□□□ -0.95
NPLOC4-204ENST00000570324 FZD3Q9NPG1 666 aa9.1□□□□□ -0.95
NPLOC4-204ENST00000570324 TMEM248Q9NWD8 314 aa9.1□□□□□ -0.95
NPLOC4-204ENST00000570324 TOR4AQ9NXH8 423 aa9.1□□□□□ -0.95
NPLOC4-204ENST00000570324 CA5BQ9Y2D0 317 aa9.1□□□□□ -0.95
NPLOC4-204ENST00000570324 PCDHGA1Q9Y5H4 931 aa9.1□□□□□ -0.95
NPLOC4-204ENST00000570324 WASF2Q9Y6W5 498 aa9.1□□□□□ -0.95
NPLOC4-204ENST00000570324 DOCK4Q8N1I0 1966 aa9.1□□□□□ -0.95
NPLOC4-204ENST00000570324 CHD8Q9HCK8 2581 aa9.09□□□□□ -0.95
NPLOC4-204ENST00000570324 CXorf51AA0A1B0GTR3 108 aa9.09□□□□□ -0.95
NPLOC4-204ENST00000570324 FAM149AA5PLN7 773 aa9.09□□□□□ -0.95
NPLOC4-204ENST00000570324 LRRC10BA6NIK2 292 aa9.09□□□□□ -0.95
NPLOC4-204ENST00000570324 A6NNZ2 444 aa9.09□□□□□ -0.95
NPLOC4-204ENST00000570324 TMCO5BA8MYB1 307 aa9.09□□□□□ -0.95
NPLOC4-204ENST00000570324 FAM72CH0Y354 149 aa9.09□□□□□ -0.95
NPLOC4-204ENST00000570324 CCP110O43303 1012 aa9.09□□□□□ -0.95
NPLOC4-204ENST00000570324 ZMPSTE24O75844 475 aa9.09□□□□□ -0.95
NPLOC4-204ENST00000570324 POP4O95707 220 aaKnown RBP9.09□□□□□ -0.95
NPLOC4-204ENST00000570324 ALPPL2P10696 532 aa9.09□□□□□ -0.95
NPLOC4-204ENST00000570324 ADRB3P13945 408 aa9.09□□□□□ -0.95
NPLOC4-204ENST00000570324 ZNF143P52747 638 aaPredicted RBP9.09□□□□□ -0.95
NPLOC4-204ENST00000570324 HDAC4P56524 1084 aa9.09□□□□□ -0.95
NPLOC4-204ENST00000570324 GSCP56915 257 aaPredicted RBP9.09□□□□□ -0.95
NPLOC4-204ENST00000570324 TYRO3Q06418 890 aa9.09□□□□□ -0.95
NPLOC4-204ENST00000570324 PTP4A2Q12974 167 aa9.09□□□□□ -0.95
NPLOC4-204ENST00000570324 SHBQ15464 509 aa9.09□□□□□ -0.95
NPLOC4-204ENST00000570324 ZNF284Q2VY69 593 aa9.09□□□□□ -0.95
NPLOC4-204ENST00000570324 ANO6Q4KMQ2 910 aa9.09□□□□□ -0.95
NPLOC4-204ENST00000570324 RAB6CQ53S08 254 aa9.09□□□□□ -0.95
NPLOC4-204ENST00000570324 FAM72AQ5TYM5 149 aa9.09□□□□□ -0.95
NPLOC4-204ENST00000570324 ACAD10Q6JQN1 1059 aa9.09□□□□□ -0.95
NPLOC4-204ENST00000570324 FAM72DQ6L9T8 149 aa9.09□□□□□ -0.95
NPLOC4-204ENST00000570324 LEKR1Q6ZMV7 388 aa9.09□□□□□ -0.95
NPLOC4-204ENST00000570324 PTAR1Q7Z6K3 402 aaPredicted RBP9.09□□□□□ -0.95
NPLOC4-204ENST00000570324 ZSCAN30Q86W11 494 aa9.09□□□□□ -0.95
NPLOC4-204ENST00000570324 TMPRSS12Q86WS5 348 aa9.09□□□□□ -0.95
NPLOC4-204ENST00000570324 FAM72BQ86X60 149 aa9.09□□□□□ -0.95
NPLOC4-204ENST00000570324 DCP2Q8IU60 420 aaKnown RBP9.09□□□□□ -0.95
NPLOC4-204ENST00000570324 PAF1Q8N7H5 531 aa9.09□□□□□ -0.95
NPLOC4-204ENST00000570324 PDCD7Q8N8D1 485 aaKnown RBP9.09□□□□□ -0.95
NPLOC4-204ENST00000570324 OR6K2Q8NGY2 324 aa9.09□□□□□ -0.95
NPLOC4-204ENST00000570324 MDM1Q8TC05 714 aa9.09□□□□□ -0.95
NPLOC4-204ENST00000570324 CENPIQ92674 756 aaPredicted RBP9.09□□□□□ -0.95
NPLOC4-204ENST00000570324 RAB7BQ96AH8 199 aa9.09□□□□□ -0.95
NPLOC4-204ENST00000570324 ARHGEF26Q96DR7 871 aa9.09□□□□□ -0.95
NPLOC4-204ENST00000570324 GDAP1L1Q96MZ0 367 aa9.09□□□□□ -0.95
NPLOC4-204ENST00000570324 SLC17A9Q9BYT1 436 aa9.09□□□□□ -0.95
NPLOC4-204ENST00000570324 RAB6CQ9H0N0 254 aa9.09□□□□□ -0.95
NPLOC4-204ENST00000570324 NDFIP2Q9NV92 336 aa9.09□□□□□ -0.95
NPLOC4-204ENST00000570324 EVA1BQ9NVM1 165 aa9.09□□□□□ -0.95
NPLOC4-204ENST00000570324 KLHL11Q9NVR0 708 aa9.09□□□□□ -0.95
NPLOC4-204ENST00000570324 DONSONQ9NYP3 566 aa9.09□□□□□ -0.95
NPLOC4-204ENST00000570324 LHX6Q9UPM6 363 aa9.09□□□□□ -0.95
NPLOC4-204ENST00000570324 EPG5Q9HCE0 2579 aa9.09□□□□□ -0.95
NPLOC4-204ENST00000570324 PTPRBP23467 1997 aa9.08□□□□□ -0.96
NPLOC4-204ENST00000570324 TRABD2BA6NFA1 517 aa9.08□□□□□ -0.96
NPLOC4-204ENST00000570324 NEMP2A6NFY4 417 aa9.08□□□□□ -0.96
NPLOC4-204ENST00000570324 C16orf96A6NNT2 1141 aa9.08□□□□□ -0.96
NPLOC4-204ENST00000570324 C10orf142B7Z368 130 aa9.08□□□□□ -0.96
NPLOC4-204ENST00000570324 H3BM21 787 aa9.08□□□□□ -0.96
NPLOC4-204ENST00000570324 FPGTO14772 594 aa9.08□□□□□ -0.96
NPLOC4-204ENST00000570324 DAPK3O43293 454 aa9.08□□□□□ -0.96
NPLOC4-204ENST00000570324 TSPAN6O43657 245 aa9.08□□□□□ -0.96
NPLOC4-204ENST00000570324 KDELR3O43731 214 aa9.08□□□□□ -0.96
NPLOC4-204ENST00000570324 DKK1O94907 266 aa9.08□□□□□ -0.96
NPLOC4-204ENST00000570324 IGSF6O95976 241 aa9.08□□□□□ -0.96
NPLOC4-204ENST00000570324 PAK4O96013 591 aaPredicted RBP9.08□□□□□ -0.96
NPLOC4-204ENST00000570324 GSRP00390 522 aa9.08□□□□□ -0.96
NPLOC4-204ENST00000570324 UGT2B4P06133 528 aa9.08□□□□□ -0.96
NPLOC4-204ENST00000570324 CKMT2P17540 419 aa9.08□□□□□ -0.96
NPLOC4-204ENST00000570324 XPAP23025 273 aaPredicted RBP9.08□□□□□ -0.96
NPLOC4-204ENST00000570324 AIF1P55008 147 aa9.08□□□□□ -0.96
NPLOC4-204ENST00000570324 CLDN2P57739 230 aa9.08□□□□□ -0.96
NPLOC4-204ENST00000570324 YBEYP58557 167 aaPredicted RBP9.08□□□□□ -0.96
NPLOC4-204ENST00000570324 TPI1P60174 286 aa9.08□□□□□ -0.96
NPLOC4-204ENST00000570324 RHOAP61586 193 aa9.08□□□□□ -0.96
NPLOC4-204ENST00000570324 TPM4P67936 248 aa9.08□□□□□ -0.96
NPLOC4-204ENST00000570324 CYP4F3Q08477 520 aa9.08□□□□□ -0.96
NPLOC4-204ENST00000570324 ILKQ13418 452 aa9.08□□□□□ -0.96
NPLOC4-204ENST00000570324 SMAD1Q15797 465 aaKnown RBP9.08□□□□□ -0.96
NPLOC4-204ENST00000570324 ASIC2Q16515 512 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms