RNA–Protein interactions for RNA: ENST00000569720.1

SPG7-221, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 2

Gene SPG7, Length 909 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-221ENST00000569720 NOP9Q86U38 636 aaKnown RBP13.39□□□□□ -0.27
SPG7-221ENST00000569720 DCP2Q8IU60 420 aaKnown RBP13.39□□□□□ -0.27
SPG7-221ENST00000569720 DRC7Q8IY82 874 aa13.39□□□□□ -0.27
SPG7-221ENST00000569720 CACTIN-AS1Q8N1I8 211 aa13.39□□□□□ -0.27
SPG7-221ENST00000569720 OR4C6Q8NH72 309 aa13.39□□□□□ -0.27
SPG7-221ENST00000569720 CPA5Q8WXQ8 436 aa13.39□□□□□ -0.27
SPG7-221ENST00000569720 FEM1CQ96JP0 617 aa13.39□□□□□ -0.27
SPG7-221ENST00000569720 HEPHQ9BQS7 1158 aa13.39□□□□□ -0.27
SPG7-221ENST00000569720 RETREG1Q9H6L5 497 aa13.39□□□□□ -0.27
SPG7-221ENST00000569720 FZD3Q9NPG1 666 aa13.39□□□□□ -0.27
SPG7-221ENST00000569720 PPARGC1AQ9UBK2 798 aaKnown RBP13.39□□□□□ -0.27
SPG7-221ENST00000569720 TMEM59LQ9UK28 342 aa13.39□□□□□ -0.27
SPG7-221ENST00000569720 HS3ST3A1Q9Y663 406 aa13.39□□□□□ -0.27
SPG7-221ENST00000569720 CHD5Q8TDI0 1954 aa13.38□□□□□ -0.27
SPG7-221ENST00000569720 CXorf51AA0A1B0GTR3 108 aa13.38□□□□□ -0.27
SPG7-221ENST00000569720 NEMP2A6NFY4 417 aa13.38□□□□□ -0.27
SPG7-221ENST00000569720 LRRC10BA6NIK2 292 aa13.38□□□□□ -0.27
SPG7-221ENST00000569720 A6NNZ2 444 aa13.38□□□□□ -0.27
SPG7-221ENST00000569720 RRP8O43159 456 aaKnown RBP13.38□□□□□ -0.27
SPG7-221ENST00000569720 DGKAP23743 735 aa13.38□□□□□ -0.27
SPG7-221ENST00000569720 ITGB7P26010 798 aa13.38□□□□□ -0.27
SPG7-221ENST00000569720 GEMIN4P57678 1058 aaKnown RBP13.38□□□□□ -0.27
SPG7-221ENST00000569720 RPS21P63220 83 aaKnown RBP13.38□□□□□ -0.27
SPG7-221ENST00000569720 ATP11AP98196 1134 aa13.38□□□□□ -0.27
SPG7-221ENST00000569720 MAPK8IP2Q13387 824 aaPredicted RBP13.38□□□□□ -0.27
SPG7-221ENST00000569720 RTP5Q14D33 572 aa13.38□□□□□ -0.27
SPG7-221ENST00000569720 IQCB1Q15051 598 aa13.38□□□□□ -0.27
SPG7-221ENST00000569720 BNIPLQ7Z465 357 aa13.38□□□□□ -0.27
SPG7-221ENST00000569720 PTAR1Q7Z6K3 402 aaPredicted RBP13.38□□□□□ -0.27
SPG7-221ENST00000569720 ZSCAN30Q86W11 494 aa13.38□□□□□ -0.27
SPG7-221ENST00000569720 SLC25A45Q8N413 288 aa13.38□□□□□ -0.27
SPG7-221ENST00000569720 OR13H1Q8NG92 308 aa13.38□□□□□ -0.27
SPG7-221ENST00000569720 EPS8L1Q8TE68 723 aa13.38□□□□□ -0.27
SPG7-221ENST00000569720 RFFLQ8WZ73 363 aa13.38□□□□□ -0.27
SPG7-221ENST00000569720 BAP1Q92560 729 aa13.38□□□□□ -0.27
SPG7-221ENST00000569720 IFT43Q96FT9 208 aa13.38□□□□□ -0.27
SPG7-221ENST00000569720 SLC17A9Q9BYT1 436 aa13.38□□□□□ -0.27
SPG7-221ENST00000569720 METTL5Q9NRN9 209 aaKnown RBP13.38□□□□□ -0.27
SPG7-221ENST00000569720 SAMSN1Q9NSI8 373 aaKnown RBP13.38□□□□□ -0.27
SPG7-221ENST00000569720 EVA1BQ9NVM1 165 aa13.38□□□□□ -0.27
SPG7-221ENST00000569720 ZFR2Q9UPR6 939 aaKnown RBP13.38□□□□□ -0.27
SPG7-221ENST00000569720 CLCA2Q9UQC9 943 aa13.38□□□□□ -0.27
SPG7-221ENST00000569720 WASF2Q9Y6W5 498 aa13.38□□□□□ -0.27
SPG7-221ENST00000569720 SHROOM3Q8TF72 1996 aa13.38□□□□□ -0.27
SPG7-221ENST00000569720 TRIM38O00635 465 aa13.37□□□□□ -0.27
SPG7-221ENST00000569720 FFAR2O15552 330 aa13.37□□□□□ -0.27
SPG7-221ENST00000569720 ZMPSTE24O75844 475 aa13.37□□□□□ -0.27
SPG7-221ENST00000569720 PIAS2O75928 621 aa13.37□□□□□ -0.27
SPG7-221ENST00000569720 ADRB3P13945 408 aa13.37□□□□□ -0.27
SPG7-221ENST00000569720 SDC4P31431 198 aa13.37□□□□□ -0.27
SPG7-221ENST00000569720 L1CAMP32004 1257 aa13.37□□□□□ -0.27
SPG7-221ENST00000569720 CCNHP51946 323 aaPredicted RBP13.37□□□□□ -0.27
SPG7-221ENST00000569720 CLDN2P57739 230 aa13.37□□□□□ -0.27
SPG7-221ENST00000569720 HNRNPKP61978 463 aaKnown RBP eCLIP13.37□□□□□ -0.27
SPG7-221ENST00000569720 CDR2Q01850 454 aa13.37□□□□□ -0.27
SPG7-221ENST00000569720 CDO1Q16878 200 aa13.37□□□□□ -0.27
SPG7-221ENST00000569720 TMEM259Q4ZIN3 620 aa13.37□□□□□ -0.27
SPG7-221ENST00000569720 SOWAHCQ53LP3 525 aaPredicted RBP13.37□□□□□ -0.27
SPG7-221ENST00000569720 SEL1L3Q68CR1 1132 aa13.37□□□□□ -0.27
SPG7-221ENST00000569720 TRNP1Q6NT89 227 aa13.37□□□□□ -0.27
SPG7-221ENST00000569720 RWDD4Q6NW29 188 aaKnown RBP13.37□□□□□ -0.27
SPG7-221ENST00000569720 GCNT7Q6ZNI0 430 aa13.37□□□□□ -0.27
SPG7-221ENST00000569720 Q6ZSR6 202 aa13.37□□□□□ -0.27
SPG7-221ENST00000569720 ABI3BPQ7Z7G0 1075 aa13.37□□□□□ -0.27
SPG7-221ENST00000569720 RYBPQ8N488 228 aaPredicted RBP13.37□□□□□ -0.27
SPG7-221ENST00000569720 EMC1Q8N766 993 aa13.37□□□□□ -0.27
SPG7-221ENST00000569720 ISG20Q96AZ6 181 aaKnown RBP13.37□□□□□ -0.27
SPG7-221ENST00000569720 ZDHHC6Q9H6R6 413 aa13.37□□□□□ -0.27
SPG7-221ENST00000569720 DNAJC28Q9NX36 388 aa13.37□□□□□ -0.27
SPG7-221ENST00000569720 TAB2Q9NYJ8 693 aa13.37□□□□□ -0.27
SPG7-221ENST00000569720 ZNF212Q9UDV6 495 aa13.37□□□□□ -0.27
SPG7-221ENST00000569720 OR12D3Q9UGF7 316 aa13.37□□□□□ -0.27
SPG7-221ENST00000569720 HPCAL4Q9UM19 191 aa13.37□□□□□ -0.27
SPG7-221ENST00000569720 FCF1Q9Y324 198 aaKnown RBP13.37□□□□□ -0.27
SPG7-221ENST00000569720 H3BM21 787 aa13.36□□□□□ -0.27
SPG7-221ENST00000569720 AP1G1O43747 822 aa13.36□□□□□ -0.27
SPG7-221ENST00000569720 ZNF821O75541 412 aaPredicted RBP13.36□□□□□ -0.27
SPG7-221ENST00000569720 GFPT2O94808 682 aa13.36□□□□□ -0.27
SPG7-221ENST00000569720 RHOQP17081 205 aa13.36□□□□□ -0.27
SPG7-221ENST00000569720 ADRA1BP35368 520 aa13.36□□□□□ -0.27
SPG7-221ENST00000569720 EIF2S3P41091 472 aaKnown RBP13.36□□□□□ -0.27
SPG7-221ENST00000569720 MAPKAPK2P49137 400 aa13.36□□□□□ -0.27
SPG7-221ENST00000569720 DUSP3P51452 185 aaPredicted RBP13.36□□□□□ -0.27
SPG7-221ENST00000569720 ARF5P84085 180 aa13.36□□□□□ -0.27
SPG7-221ENST00000569720 INSM1Q01101 510 aaPredicted RBP13.36□□□□□ -0.27
SPG7-221ENST00000569720 NRG1Q02297 640 aaPredicted RBP13.36□□□□□ -0.27
SPG7-221ENST00000569720 SGCGQ13326 291 aa13.36□□□□□ -0.27
SPG7-221ENST00000569720 POLD3Q15054 466 aaPredicted RBP13.36□□□□□ -0.27
SPG7-221ENST00000569720 FKBP15Q5T1M5 1219 aa13.36□□□□□ -0.27
SPG7-221ENST00000569720 KYAT3Q6YP21 454 aaKnown RBP13.36□□□□□ -0.27
SPG7-221ENST00000569720 TRIM72Q6ZMU5 477 aa13.36□□□□□ -0.27
SPG7-221ENST00000569720 TMC6Q7Z403 805 aa13.36□□□□□ -0.27
SPG7-221ENST00000569720 PLPP6Q8IY26 295 aa13.36□□□□□ -0.27
SPG7-221ENST00000569720 DCBLD1Q8N8Z6 715 aa13.36□□□□□ -0.27
SPG7-221ENST00000569720 RXFP2Q8WXD0 754 aa13.36□□□□□ -0.27
SPG7-221ENST00000569720 RAB7BQ96AH8 199 aa13.36□□□□□ -0.27
SPG7-221ENST00000569720 DUSP23Q9BVJ7 150 aa13.36□□□□□ -0.27
SPG7-221ENST00000569720 OSBPL2Q9H1P3 480 aa13.36□□□□□ -0.27
SPG7-221ENST00000569720 VPS16Q9H269 839 aa13.36□□□□□ -0.27
SPG7-221ENST00000569720 USP29Q9HBJ7 922 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms