RNA–Protein interactions for RNA: ENST00000569252.5

USB1-215, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 573 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-215ENST00000569252 ADCY2Q08462 1091 aa16.32■□□□□ 0.2
USB1-215ENST00000569252 SLC10A2Q12908 348 aaPredicted RBP16.32■□□□□ 0.2
USB1-215ENST00000569252 DNTTIP2Q5QJE6 756 aaKnown RBP16.32■□□□□ 0.2
USB1-215ENST00000569252 EGFLAMQ63HQ2 1017 aa16.32■□□□□ 0.2
USB1-215ENST00000569252 LEKR1Q6ZMV7 388 aa16.32■□□□□ 0.2
USB1-215ENST00000569252 CDKL3Q8IVW4 592 aaPredicted RBP16.32■□□□□ 0.2
USB1-215ENST00000569252 SH2D3CQ8N5H7 860 aa16.32■□□□□ 0.2
USB1-215ENST00000569252 ACTL9Q8TC94 416 aa16.32■□□□□ 0.2
USB1-215ENST00000569252 ACTRT1Q8TDG2 376 aa16.32■□□□□ 0.2
USB1-215ENST00000569252 USP33Q8TEY7 942 aa16.32■□□□□ 0.2
USB1-215ENST00000569252 HDAC11Q96DB2 347 aa16.32■□□□□ 0.2
USB1-215ENST00000569252 MS4A14Q96JA4 679 aa16.32■□□□□ 0.2
USB1-215ENST00000569252 TSGA13Q96PP4 275 aa16.32■□□□□ 0.2
USB1-215ENST00000569252 IER2Q9BTL4 223 aa16.32■□□□□ 0.2
USB1-215ENST00000569252 CINPQ9BW66 212 aaPredicted RBP16.32■□□□□ 0.2
USB1-215ENST00000569252 CHRDQ9H2X0 955 aa16.32■□□□□ 0.2
USB1-215ENST00000569252 SEPT10Q9P0V9 454 aa16.32■□□□□ 0.2
USB1-215ENST00000569252 TTC7AQ9ULT0 858 aaPredicted RBP16.32■□□□□ 0.2
USB1-215ENST00000569252 STON1Q9Y6Q2 735 aa16.32■□□□□ 0.2
USB1-215ENST00000569252 DOCK4Q8N1I0 1966 aa16.31■□□□□ 0.2
USB1-215ENST00000569252 CHD6Q8TD26 2715 aa16.31■□□□□ 0.2
USB1-215ENST00000569252 MATN3O15232 486 aa16.31■□□□□ 0.2
USB1-215ENST00000569252 HRO43593 1189 aa16.31■□□□□ 0.2
USB1-215ENST00000569252 MAFKO60675 156 aa16.31■□□□□ 0.2
USB1-215ENST00000569252 URI1O94763 535 aaPredicted RBP16.31■□□□□ 0.2
USB1-215ENST00000569252 EPHX1P07099 455 aa16.31■□□□□ 0.2
USB1-215ENST00000569252 PECAM1P16284 738 aaPredicted RBP16.31■□□□□ 0.2
USB1-215ENST00000569252 KIR2DL1P43626 348 aaPredicted RBP16.31■□□□□ 0.2
USB1-215ENST00000569252 RPS9P46781 194 aaKnown RBP16.31■□□□□ 0.2
USB1-215ENST00000569252 STK19P49842 368 aaPredicted RBP16.31■□□□□ 0.2
USB1-215ENST00000569252 SERPINH1P50454 418 aaKnown RBP16.31■□□□□ 0.2
USB1-215ENST00000569252 ARF5P84085 180 aa16.31■□□□□ 0.2
USB1-215ENST00000569252 LMNB2Q03252 620 aa16.31■□□□□ 0.2
USB1-215ENST00000569252 RAD51Q06609 339 aa16.31■□□□□ 0.2
USB1-215ENST00000569252 PPIDQ08752 370 aaKnown RBP16.31■□□□□ 0.2
USB1-215ENST00000569252 ITKQ08881 620 aa16.31■□□□□ 0.2
USB1-215ENST00000569252 TUBB2AQ13885 445 aa16.31■□□□□ 0.2
USB1-215ENST00000569252 ZNF235Q14590 738 aa16.31■□□□□ 0.2
USB1-215ENST00000569252 NOMO1Q15155 1222 aa16.31■□□□□ 0.2
USB1-215ENST00000569252 DLG2Q15700 870 aa16.31■□□□□ 0.2
USB1-215ENST00000569252 SFTPA1Q8IWL2 248 aa16.31■□□□□ 0.2
USB1-215ENST00000569252 RASGEF1CQ8N431 466 aa16.31■□□□□ 0.2
USB1-215ENST00000569252 RYBPQ8N488 228 aaPredicted RBP16.31■□□□□ 0.2
USB1-215ENST00000569252 ALLCQ8N6M5 410 aa16.31■□□□□ 0.2
USB1-215ENST00000569252 TXNDC5Q8NBS9 432 aaKnown RBP16.31■□□□□ 0.2
USB1-215ENST00000569252 COG1Q8WTW3 980 aa16.31■□□□□ 0.2
USB1-215ENST00000569252 CAPZA3Q96KX2 299 aa16.31■□□□□ 0.2
USB1-215ENST00000569252 LGMNQ99538 433 aa16.31■□□□□ 0.2
USB1-215ENST00000569252 TUBB2BQ9BVA1 445 aa16.31■□□□□ 0.2
USB1-215ENST00000569252 CEP44Q9C0F1 390 aa16.31■□□□□ 0.2
USB1-215ENST00000569252 POLMQ9NP87 494 aaPredicted RBP16.31■□□□□ 0.2
USB1-215ENST00000569252 CACNA2D2Q9NY47 1150 aa16.31■□□□□ 0.2
USB1-215ENST00000569252 SEPT3Q9UH03 358 aa16.31■□□□□ 0.2
USB1-215ENST00000569252 SLCO3A1Q9UIG8 710 aa16.31■□□□□ 0.2
USB1-215ENST00000569252 GMEB2Q9UKD1 530 aa16.31■□□□□ 0.2
USB1-215ENST00000569252 HS3ST2Q9Y278 367 aa16.31■□□□□ 0.2
USB1-215ENST00000569252 RALGAPA1Q6GYQ0 2036 aa16.3■□□□□ 0.2
USB1-215ENST00000569252 EDDM13A0A1B0GTR0 161 aa16.3■□□□□ 0.2
USB1-215ENST00000569252 TARSL2A2RTX5 802 aaKnown RBP16.3■□□□□ 0.2
USB1-215ENST00000569252 ESPNB1AK53 854 aa16.3■□□□□ 0.2
USB1-215ENST00000569252 KRIT1O00522 736 aa16.3■□□□□ 0.2
USB1-215ENST00000569252 ATP9BO43861 1147 aa16.3■□□□□ 0.2
USB1-215ENST00000569252 BNIP3LO60238 219 aa16.3■□□□□ 0.2
USB1-215ENST00000569252 RNASEH1O60930 286 aaKnown RBP16.3■□□□□ 0.2
USB1-215ENST00000569252 ZMPSTE24O75844 475 aa16.3■□□□□ 0.2
USB1-215ENST00000569252 MT-CO1P00395 513 aa16.3■□□□□ 0.2
USB1-215ENST00000569252 RBP3P10745 1247 aa16.3■□□□□ 0.2
USB1-215ENST00000569252 SRCP12931 536 aa16.3■□□□□ 0.2
USB1-215ENST00000569252 CCNB1P14635 433 aa16.3■□□□□ 0.2
USB1-215ENST00000569252 ACTN2P35609 894 aa16.3■□□□□ 0.2
USB1-215ENST00000569252 IL12RB1P42701 662 aa16.3■□□□□ 0.2
USB1-215ENST00000569252 WASP42768 502 aa16.3■□□□□ 0.2
USB1-215ENST00000569252 RHOAP61586 193 aa16.3■□□□□ 0.2
USB1-215ENST00000569252 SNRPD1P62314 119 aaKnown RBP16.3■□□□□ 0.2
USB1-215ENST00000569252 KLF1Q13351 362 aaPredicted RBP16.3■□□□□ 0.2
USB1-215ENST00000569252 HNRNPDQ14103 355 aaKnown RBP16.3■□□□□ 0.2
USB1-215ENST00000569252 LBRQ14739 615 aaKnown RBP16.3■□□□□ 0.2
USB1-215ENST00000569252 CCNG2Q16589 344 aa16.3■□□□□ 0.2
USB1-215ENST00000569252 PTPRNQ16849 979 aa16.3■□□□□ 0.2
USB1-215ENST00000569252 SLC45A4Q5BKX6 768 aa16.3■□□□□ 0.2
USB1-215ENST00000569252 PPM1JQ5JR12 505 aa16.3■□□□□ 0.2
USB1-215ENST00000569252 ARHGAP36Q6ZRI8 547 aa16.3■□□□□ 0.2
USB1-215ENST00000569252 TP53INP2Q8IXH6 220 aa16.3■□□□□ 0.2
USB1-215ENST00000569252 FATE1Q969F0 183 aa16.3■□□□□ 0.2
USB1-215ENST00000569252 ISG20Q96AZ6 181 aaKnown RBP16.3■□□□□ 0.2
USB1-215ENST00000569252 OLFM3Q96PB7 478 aa16.3■□□□□ 0.2
USB1-215ENST00000569252 POLR3BQ9NW08 1133 aaPredicted RBP16.3■□□□□ 0.2
USB1-215ENST00000569252 RBM22Q9NW64 420 aaKnown RBP eCLIP16.3■□□□□ 0.2
USB1-215ENST00000569252 FEZ2Q9UHY8 353 aaPredicted RBP16.3■□□□□ 0.2
USB1-215ENST00000569252 ZNF148Q9UQR1 794 aa16.3■□□□□ 0.2
USB1-215ENST00000569252 FRYQ5TBA9 3013 aa16.29■□□□□ 0.2
USB1-215ENST00000569252 TTC34A8MYJ7 566 aa16.29■□□□□ 0.2
USB1-215ENST00000569252 ZNF185O15231 689 aa16.29■□□□□ 0.2
USB1-215ENST00000569252 ALDH1A2O94788 518 aa16.29■□□□□ 0.2
USB1-215ENST00000569252 HOXB2P14652 356 aa16.29■□□□□ 0.2
USB1-215ENST00000569252 HSPA9P38646 679 aaKnown RBP16.29■□□□□ 0.2
USB1-215ENST00000569252 MMP13P45452 471 aa16.29■□□□□ 0.2
USB1-215ENST00000569252 BYSLQ13895 437 aaKnown RBP16.29■□□□□ 0.2
USB1-215ENST00000569252 HNRNPA1L2Q32P51 320 aaKnown RBP16.29■□□□□ 0.2
USB1-215ENST00000569252 GSTA5Q7RTV2 222 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms