RNA–Protein interactions for RNA: ENST00000569046.1

HMGB1P6-201, Transcript of high mobility group box 1 pseudogene 6, humanhuman

BASIC

Gene HMGB1P6, Length 646 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P6-201ENST00000569046 NPPBP16860 134 aa3.72□□□□□ -1.81
HMGB1P6-201ENST00000569046 RPS6KB1P23443 525 aa3.72□□□□□ -1.81
HMGB1P6-201ENST00000569046 ALDH1B1P30837 517 aa3.72□□□□□ -1.81
HMGB1P6-201ENST00000569046 TECP42680 631 aa3.72□□□□□ -1.81
HMGB1P6-201ENST00000569046 NR4A2P43354 598 aa3.72□□□□□ -1.81
HMGB1P6-201ENST00000569046 RXRGP48443 463 aa3.72□□□□□ -1.81
HMGB1P6-201ENST00000569046 KRTAP10-11P60412 298 aa3.72□□□□□ -1.81
HMGB1P6-201ENST00000569046 HSF1Q00613 529 aa3.72□□□□□ -1.81
HMGB1P6-201ENST00000569046 ID2Q02363 134 aa3.72□□□□□ -1.81
HMGB1P6-201ENST00000569046 ICA1Q05084 483 aa3.72□□□□□ -1.81
HMGB1P6-201ENST00000569046 DMWDQ09019 674 aa3.72□□□□□ -1.81
HMGB1P6-201ENST00000569046 PPFIA1Q13136 1202 aa3.72□□□□□ -1.81
HMGB1P6-201ENST00000569046 MTA1Q13330 715 aa3.72□□□□□ -1.81
HMGB1P6-201ENST00000569046 BLMHQ13867 455 aa3.72□□□□□ -1.81
HMGB1P6-201ENST00000569046 DCTN1Q14203 1278 aa3.72□□□□□ -1.81
HMGB1P6-201ENST00000569046 STARD3Q14849 445 aa3.72□□□□□ -1.81
HMGB1P6-201ENST00000569046 INTS11Q5TA45 600 aaKnown RBP3.72□□□□□ -1.81
HMGB1P6-201ENST00000569046 ANO7Q6IWH7 933 aa3.72□□□□□ -1.81
HMGB1P6-201ENST00000569046 CYP26C1Q6V0L0 522 aa3.72□□□□□ -1.81
HMGB1P6-201ENST00000569046 DEF8Q6ZN54 512 aa3.72□□□□□ -1.81
HMGB1P6-201ENST00000569046 USP50Q70EL3 339 aaPredicted RBP3.72□□□□□ -1.81
HMGB1P6-201ENST00000569046 MOB2Q70IA6 237 aa3.72□□□□□ -1.81
HMGB1P6-201ENST00000569046 RSRC2Q7L4I2 434 aaKnown RBP3.72□□□□□ -1.81
HMGB1P6-201ENST00000569046 UBE2Q1Q7Z7E8 422 aa3.72□□□□□ -1.81
HMGB1P6-201ENST00000569046 NRACQ8N912 160 aa3.72□□□□□ -1.81
HMGB1P6-201ENST00000569046 CCDC89Q8N998 374 aa3.72□□□□□ -1.81
HMGB1P6-201ENST00000569046 NAXEQ8NCW5 288 aa3.72□□□□□ -1.81
HMGB1P6-201ENST00000569046 ASB12Q8WXK4 309 aa3.72□□□□□ -1.81
HMGB1P6-201ENST00000569046 PIGKQ92643 395 aa3.72□□□□□ -1.81
HMGB1P6-201ENST00000569046 PPM1MQ96MI6 270 aa3.72□□□□□ -1.81
HMGB1P6-201ENST00000569046 GPR78Q96P69 363 aa3.72□□□□□ -1.81
HMGB1P6-201ENST00000569046 PRPF18Q99633 342 aaKnown RBP3.72□□□□□ -1.81
HMGB1P6-201ENST00000569046 OBP2BQ9NPH6 170 aa3.72□□□□□ -1.81
HMGB1P6-201ENST00000569046 FBXO28Q9NVF7 368 aa3.72□□□□□ -1.81
HMGB1P6-201ENST00000569046 CLIC5Q9NZA1 410 aa3.72□□□□□ -1.81
HMGB1P6-201ENST00000569046 PDP2Q9P2J9 529 aa3.72□□□□□ -1.81
HMGB1P6-201ENST00000569046 CNOT7Q9UIV1 285 aaKnown RBP3.72□□□□□ -1.81
HMGB1P6-201ENST00000569046 FBXO2Q9UK22 296 aaPredicted RBP3.72□□□□□ -1.81
HMGB1P6-201ENST00000569046 GJD2Q9UKL4 321 aa3.72□□□□□ -1.81
HMGB1P6-201ENST00000569046 RRP7AQ9Y3A4 280 aaKnown RBP3.72□□□□□ -1.81
HMGB1P6-201ENST00000569046 ABCC12Q96J65 1359 aa3.72□□□□□ -1.81
HMGB1P6-201ENST00000569046 ZSWIM8A7E2V4 1837 aa3.72□□□□□ -1.81
HMGB1P6-201ENST00000569046 COL4A1P02462 1669 aa3.71□□□□□ -1.81
HMGB1P6-201ENST00000569046 ANKRD36CQ5JPF3 1778 aa3.71□□□□□ -1.81
HMGB1P6-201ENST00000569046 SNED1Q8TER0 1413 aa3.71□□□□□ -1.82
HMGB1P6-201ENST00000569046 SCN9AQ15858 1988 aa3.71□□□□□ -1.82
HMGB1P6-201ENST00000569046 DDX60Q8IY21 1712 aaKnown RBP3.71□□□□□ -1.82
HMGB1P6-201ENST00000569046 LY6G6EA0A0G2JKS1 128 aa3.71□□□□□ -1.82
HMGB1P6-201ENST00000569046 GOLGA6L3A6NEY3 463 aa3.71□□□□□ -1.82
HMGB1P6-201ENST00000569046 KIF28PB7ZC32 967 aa3.71□□□□□ -1.82
HMGB1P6-201ENST00000569046 FFAR2O15552 330 aa3.71□□□□□ -1.82
HMGB1P6-201ENST00000569046 CNOT3O75175 753 aaKnown RBP3.71□□□□□ -1.82
HMGB1P6-201ENST00000569046 CSTBP04080 98 aaKnown RBP3.71□□□□□ -1.82
HMGB1P6-201ENST00000569046 SLC3A2P08195 630 aaKnown RBP3.71□□□□□ -1.82
HMGB1P6-201ENST00000569046 RFPL3SP0C7P2 107 aa3.71□□□□□ -1.82
HMGB1P6-201ENST00000569046 PTMSP20962 102 aa3.71□□□□□ -1.82
HMGB1P6-201ENST00000569046 PDIA3P30101 505 aaKnown RBP3.71□□□□□ -1.82
HMGB1P6-201ENST00000569046 SLC8A1P32418 973 aa3.71□□□□□ -1.82
HMGB1P6-201ENST00000569046 ALDH18A1P54886 795 aaKnown RBP3.71□□□□□ -1.82
HMGB1P6-201ENST00000569046 RPS13P62277 151 aaKnown RBP3.71□□□□□ -1.82
HMGB1P6-201ENST00000569046 GALNT1Q10472 559 aaPredicted RBP3.71□□□□□ -1.82
HMGB1P6-201ENST00000569046 STIM1Q13586 685 aa3.71□□□□□ -1.82
HMGB1P6-201ENST00000569046 SPARCL1Q14515 664 aa3.71□□□□□ -1.82
HMGB1P6-201ENST00000569046 AAK1Q2M2I8 961 aa3.71□□□□□ -1.82
HMGB1P6-201ENST00000569046 SLC9C1Q4G0N8 1177 aa3.71□□□□□ -1.82
HMGB1P6-201ENST00000569046 CCDC184Q52MB2 194 aa3.71□□□□□ -1.82
HMGB1P6-201ENST00000569046 SUSD4Q5VX71 490 aa3.71□□□□□ -1.82
HMGB1P6-201ENST00000569046 RINT1Q6NUQ1 792 aa3.71□□□□□ -1.82
HMGB1P6-201ENST00000569046 RGMBQ6NW40 437 aa3.71□□□□□ -1.82
HMGB1P6-201ENST00000569046 FAM180BQ6P0A1 224 aa3.71□□□□□ -1.82
HMGB1P6-201ENST00000569046 CFAP161Q6P656 301 aa3.71□□□□□ -1.82
HMGB1P6-201ENST00000569046 C16orf54Q6UWD8 224 aa3.71□□□□□ -1.82
HMGB1P6-201ENST00000569046 MCM10Q7L590 875 aa3.71□□□□□ -1.82
HMGB1P6-201ENST00000569046 TRABD2AQ86V40 505 aa3.71□□□□□ -1.82
HMGB1P6-201ENST00000569046 RHPN2Q8IUC4 686 aa3.71□□□□□ -1.82
HMGB1P6-201ENST00000569046 Q8N9P0 234 aaPredicted RBP3.71□□□□□ -1.82
HMGB1P6-201ENST00000569046 PIGOQ8TEQ8 1089 aa3.71□□□□□ -1.82
HMGB1P6-201ENST00000569046 CUL5Q93034 780 aa3.71□□□□□ -1.82
HMGB1P6-201ENST00000569046 TRIM63Q969Q1 353 aa3.71□□□□□ -1.82
HMGB1P6-201ENST00000569046 ERP27Q96DN0 273 aa3.71□□□□□ -1.82
HMGB1P6-201ENST00000569046 UBXN10Q96LJ8 280 aa3.71□□□□□ -1.82
HMGB1P6-201ENST00000569046 TMEM79Q9BSE2 394 aa3.71□□□□□ -1.82
HMGB1P6-201ENST00000569046 MECRQ9BV79 373 aa3.71□□□□□ -1.82
HMGB1P6-201ENST00000569046 OSBPL5Q9H0X9 879 aaPredicted RBP3.71□□□□□ -1.82
HMGB1P6-201ENST00000569046 MOV10Q9HCE1 1003 aaKnown RBP3.71□□□□□ -1.82
HMGB1P6-201ENST00000569046 ITM2CQ9NQX7 267 aa3.71□□□□□ -1.82
HMGB1P6-201ENST00000569046 SMC4Q9NTJ3 1288 aa3.71□□□□□ -1.82
HMGB1P6-201ENST00000569046 PI4KBQ9UBF8 816 aa3.71□□□□□ -1.82
HMGB1P6-201ENST00000569046 HEY2Q9UBP5 337 aa3.71□□□□□ -1.82
HMGB1P6-201ENST00000569046 GRHPRQ9UBQ7 328 aa3.71□□□□□ -1.82
HMGB1P6-201ENST00000569046 UBE2J1Q9Y385 318 aaPredicted RBP3.71□□□□□ -1.82
HMGB1P6-201ENST00000569046 RABGAP1Q9Y3P9 1069 aa3.71□□□□□ -1.82
HMGB1P6-201ENST00000569046 ZMYM2Q9UBW7 1377 aa3.71□□□□□ -1.82
HMGB1P6-201ENST00000569046 NPC1L1Q9UHC9 1359 aa3.71□□□□□ -1.82
HMGB1P6-201ENST00000569046 KDM3BQ7LBC6 1761 aa3.71□□□□□ -1.82
HMGB1P6-201ENST00000569046 TTC3P53804 2025 aa3.7□□□□□ -1.82
HMGB1P6-201ENST00000569046 A6NCN8 305 aa3.7□□□□□ -1.82
HMGB1P6-201ENST00000569046 RRN3P2A6NIE6 340 aa3.7□□□□□ -1.82
HMGB1P6-201ENST00000569046 YDJCA8MPS7 323 aa3.7□□□□□ -1.82
HMGB1P6-201ENST00000569046 LGALS16A8MUM7 142 aa3.7□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms