RNA–Protein interactions for RNA: ENST00000568586.5

RAB40C-211, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40C, Length 648 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-211ENST00000568586 PSTKQ8IV42 348 aaKnown RBP29.94■■■□□ 2.38
RAB40C-211ENST00000568586 SKA1Q96BD8 255 aa29.94■■■□□ 2.38
RAB40C-211ENST00000568586 MRPL47Q9HD33 250 aaKnown RBP29.94■■■□□ 2.38
RAB40C-211ENST00000568586 CREB3O43889 395 aa29.93■■■□□ 2.38
RAB40C-211ENST00000568586 GYPCP04921 128 aa29.93■■■□□ 2.38
RAB40C-211ENST00000568586 SERPING1P05155 500 aa29.93■■■□□ 2.38
RAB40C-211ENST00000568586 CCNHP51946 323 aaPredicted RBP29.93■■■□□ 2.38
RAB40C-211ENST00000568586 FAM193AP78312 1265 aa29.93■■■□□ 2.38
RAB40C-211ENST00000568586 PARP15Q460N3 678 aa29.93■■■□□ 2.38
RAB40C-211ENST00000568586 ERMARDQ5T6L9 678 aa29.93■■■□□ 2.38
RAB40C-211ENST00000568586 NAPEPLDQ6IQ20 393 aa29.93■■■□□ 2.38
RAB40C-211ENST00000568586 CYP4V2Q6ZWL3 525 aaPredicted RBP29.93■■■□□ 2.38
RAB40C-211ENST00000568586 ERN2Q76MJ5 926 aaKnown RBP29.93■■■□□ 2.38
RAB40C-211ENST00000568586 CASKIN2Q8WXE0 1202 aa29.93■■■□□ 2.38
RAB40C-211ENST00000568586 ZNF653Q96CK0 615 aa29.93■■■□□ 2.38
RAB40C-211ENST00000568586 PPP1R16AQ96I34 528 aa29.93■■■□□ 2.38
RAB40C-211ENST00000568586 LRIG1Q96JA1 1093 aa29.93■■■□□ 2.38
RAB40C-211ENST00000568586 SERAC1Q96JX3 654 aa29.93■■■□□ 2.38
RAB40C-211ENST00000568586 CAMK1GQ96NX5 476 aa29.93■■■□□ 2.38
RAB40C-211ENST00000568586 NCAPGQ9BPX3 1015 aa29.93■■■□□ 2.38
RAB40C-211ENST00000568586 DONSONQ9NYP3 566 aa29.93■■■□□ 2.38
RAB40C-211ENST00000568586 PCOLCE2Q9UKZ9 415 aa29.93■■■□□ 2.38
RAB40C-211ENST00000568586 LUC7L2Q9Y383 392 aaKnown RBP29.93■■■□□ 2.38
RAB40C-211ENST00000568586 PCDHGA12O60330 932 aa29.92■■■□□ 2.38
RAB40C-211ENST00000568586 GSRP00390 522 aa29.92■■■□□ 2.38
RAB40C-211ENST00000568586 ITGB7P26010 798 aa29.92■■■□□ 2.38
RAB40C-211ENST00000568586 SIM1P81133 766 aaPredicted RBP29.92■■■□□ 2.38
RAB40C-211ENST00000568586 INO80DQ53TQ3 878 aaPredicted RBP29.92■■■□□ 2.38
RAB40C-211ENST00000568586 ADAT2Q7Z6V5 191 aaKnown RBP29.92■■■□□ 2.38
RAB40C-211ENST00000568586 GLRX5Q86SX6 157 aa29.92■■■□□ 2.38
RAB40C-211ENST00000568586 BAHD1Q8TBE0 780 aaPredicted RBP29.92■■■□□ 2.38
RAB40C-211ENST00000568586 GRIN3AQ8TCU5 1115 aa29.92■■■□□ 2.38
RAB40C-211ENST00000568586 PEBP4Q96S96 227 aa29.92■■■□□ 2.38
RAB40C-211ENST00000568586 DYRK4Q9NR20 520 aa29.92■■■□□ 2.38
RAB40C-211ENST00000568586 AP4E1Q9UPM8 1137 aa29.92■■■□□ 2.38
RAB40C-211ENST00000568586 SPAARA0A1B0GVQ0 90 aa29.91■■■□□ 2.38
RAB40C-211ENST00000568586 H0Y8X5 98 aa29.91■■■□□ 2.38
RAB40C-211ENST00000568586 RNF8O76064 485 aa29.91■■■□□ 2.38
RAB40C-211ENST00000568586 MIPP30301 263 aa29.91■■■□□ 2.38
RAB40C-211ENST00000568586 HNRNPH3P31942 346 aaKnown RBP29.91■■■□□ 2.38
RAB40C-211ENST00000568586 C21orf59P57076 290 aa29.91■■■□□ 2.38
RAB40C-211ENST00000568586 SERINC3Q13530 473 aa29.91■■■□□ 2.38
RAB40C-211ENST00000568586 ACAP1Q15027 740 aa29.91■■■□□ 2.38
RAB40C-211ENST00000568586 TRIP6Q15654 476 aaKnown RBP29.91■■■□□ 2.38
RAB40C-211ENST00000568586 IQCHQ86VS3 1027 aa29.91■■■□□ 2.38
RAB40C-211ENST00000568586 MFSD2AQ8NA29 543 aa29.91■■■□□ 2.38
RAB40C-211ENST00000568586 HECAQ9UBI9 543 aaPredicted RBP29.91■■■□□ 2.38
RAB40C-211ENST00000568586 RASA4BC9J798 803 aa29.9■■■□□ 2.38
RAB40C-211ENST00000568586 FLRT2O43155 660 aa29.9■■■□□ 2.38
RAB40C-211ENST00000568586 RASA4O43374 803 aa29.9■■■□□ 2.38
RAB40C-211ENST00000568586 RNGTTO60942 597 aaKnown RBP29.9■■■□□ 2.38
RAB40C-211ENST00000568586 LRCH4O75427 683 aa29.9■■■□□ 2.38
RAB40C-211ENST00000568586 DNA2P51530 1060 aa29.9■■■□□ 2.38
RAB40C-211ENST00000568586 OVGP1Q12889 678 aa29.9■■■□□ 2.38
RAB40C-211ENST00000568586 SUZ12Q15022 739 aaKnown RBP29.9■■■□□ 2.38
RAB40C-211ENST00000568586 CA9Q16790 459 aa29.9■■■□□ 2.38
RAB40C-211ENST00000568586 SETMARQ53H47 684 aaPredicted RBP29.9■■■□□ 2.38
RAB40C-211ENST00000568586 TDRD12Q587J7 1177 aaKnown RBP29.9■■■□□ 2.38
RAB40C-211ENST00000568586 VPS36Q86VN1 386 aa29.9■■■□□ 2.38
RAB40C-211ENST00000568586 OR2AP1Q8NGE2 309 aa29.9■■■□□ 2.38
RAB40C-211ENST00000568586 HMCESQ96FZ2 354 aa29.9■■■□□ 2.38
RAB40C-211ENST00000568586 CNTNAP3BQ96NU0 1288 aa29.9■■■□□ 2.38
RAB40C-211ENST00000568586 SNRNP25Q9BV90 132 aaKnown RBP29.9■■■□□ 2.38
RAB40C-211ENST00000568586 CNTNAP3Q9BZ76 1288 aa29.9■■■□□ 2.38
RAB40C-211ENST00000568586 KLC2Q9H0B6 622 aa29.9■■■□□ 2.38
RAB40C-211ENST00000568586 LRRC19Q9H756 370 aa29.9■■■□□ 2.38
RAB40C-211ENST00000568586 AASDHPPTQ9NRN7 309 aa29.9■■■□□ 2.38
RAB40C-211ENST00000568586 GPATCH2LQ9NWQ4 482 aa29.9■■■□□ 2.38
RAB40C-211ENST00000568586 A0A1B0GTQ1 180 aa29.89■■■□□ 2.38
RAB40C-211ENST00000568586 TLR4O00206 839 aa29.89■■■□□ 2.38
RAB40C-211ENST00000568586 PCK1P35558 622 aa29.89■■■□□ 2.38
RAB40C-211ENST00000568586 ZNF135P52742 658 aaPredicted RBP29.89■■■□□ 2.38
RAB40C-211ENST00000568586 NDST2P52849 883 aa29.89■■■□□ 2.38
RAB40C-211ENST00000568586 TPI1P60174 286 aa29.89■■■□□ 2.38
RAB40C-211ENST00000568586 SLC45A4Q5BKX6 768 aa29.89■■■□□ 2.38
RAB40C-211ENST00000568586 CPLX3Q8WVH0 158 aa29.89■■■□□ 2.38
RAB40C-211ENST00000568586 TM6SF2Q9BZW4 377 aa29.89■■■□□ 2.38
RAB40C-211ENST00000568586 XPO4Q9C0E2 1151 aaKnown RBP29.89■■■□□ 2.38
RAB40C-211ENST00000568586 ERVMER34-1Q9H9K5 563 aa29.89■■■□□ 2.38
RAB40C-211ENST00000568586 PCSK1NQ9UHG2 260 aa29.89■■■□□ 2.38
RAB40C-211ENST00000568586 A0A087X0T9 212 aa29.88■■■□□ 2.37
RAB40C-211ENST00000568586 PRAMEF26H0Y7S4 382 aa29.88■■■□□ 2.37
RAB40C-211ENST00000568586 KCNK3O14649 394 aa29.88■■■□□ 2.37
RAB40C-211ENST00000568586 BUB1O43683 1085 aa29.88■■■□□ 2.37
RAB40C-211ENST00000568586 AP1G1O43747 822 aa29.88■■■□□ 2.37
RAB40C-211ENST00000568586 PRPSAP2O60256 369 aa29.88■■■□□ 2.37
RAB40C-211ENST00000568586 POP4O95707 220 aaKnown RBP29.88■■■□□ 2.37
RAB40C-211ENST00000568586 FAM228BP0C875 321 aa29.88■■■□□ 2.37
RAB40C-211ENST00000568586 MAT2AP31153 395 aaKnown RBP29.88■■■□□ 2.37
RAB40C-211ENST00000568586 HCAR3P49019 387 aa29.88■■■□□ 2.37
RAB40C-211ENST00000568586 CCT8P50990 548 aa29.88■■■□□ 2.37
RAB40C-211ENST00000568586 NEK3P51956 506 aa29.88■■■□□ 2.37
RAB40C-211ENST00000568586 NXPH1P58417 271 aa29.88■■■□□ 2.37
RAB40C-211ENST00000568586 SNRPD1P62314 119 aaKnown RBP29.88■■■□□ 2.37
RAB40C-211ENST00000568586 ZNF284Q2VY69 593 aa29.88■■■□□ 2.37
RAB40C-211ENST00000568586 MYLK3Q32MK0 819 aa29.88■■■□□ 2.37
RAB40C-211ENST00000568586 HORMAD1Q86X24 394 aa29.88■■■□□ 2.37
RAB40C-211ENST00000568586 TMEM145Q8NBT3 493 aa29.88■■■□□ 2.37
RAB40C-211ENST00000568586 ELF4Q99607 663 aaPredicted RBP29.88■■■□□ 2.37
RAB40C-211ENST00000568586 DHX35Q9H5Z1 703 aaKnown RBP29.88■■■□□ 2.37
Retrieved 100 of 20,778 RNA–protein pairs in 80.7 ms