RNA–Protein interactions for RNA: ENST00000568569.1

GTF3C1-209, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-209ENST00000568569 PDX1P52945 283 aa12.05□□□□□ -0.48
GTF3C1-209ENST00000568569 SRSF1Q07955 248 aaKnown RBP eCLIP12.05□□□□□ -0.486e-6■■■□□ 19.1
GTF3C1-209ENST00000568569 NME3Q13232 169 aa12.05□□□□□ -0.48
GTF3C1-209ENST00000568569 EIF3IQ13347 325 aaKnown RBP12.05□□□□□ -0.48
GTF3C1-209ENST00000568569 SPIDRQ14159 915 aa12.05□□□□□ -0.48
GTF3C1-209ENST00000568569 DRAP1Q14919 205 aaPredicted RBP12.05□□□□□ -0.48
GTF3C1-209ENST00000568569 TAF5Q15542 800 aa12.05□□□□□ -0.48
GTF3C1-209ENST00000568569 C5orf22Q49AR2 442 aa12.05□□□□□ -0.48
GTF3C1-209ENST00000568569 PERM1Q5SV97 790 aa12.05□□□□□ -0.48
GTF3C1-209ENST00000568569 C22orf39Q6P5X5 142 aa12.05□□□□□ -0.48
GTF3C1-209ENST00000568569 ATG14Q6ZNE5 492 aa12.05□□□□□ -0.48
GTF3C1-209ENST00000568569 DPY19L3Q6ZPD9 716 aa12.05□□□□□ -0.48
GTF3C1-209ENST00000568569 ARHGEF19Q8IW93 802 aa12.05□□□□□ -0.48
GTF3C1-209ENST00000568569 HSCBQ8IWL3 235 aa12.05□□□□□ -0.48
GTF3C1-209ENST00000568569 DEFB106AQ8N104 65 aa12.05□□□□□ -0.48
GTF3C1-209ENST00000568569 EXD3Q8N9H8 876 aa12.05□□□□□ -0.48
GTF3C1-209ENST00000568569 LIN37Q96GY3 246 aaPredicted RBP12.05□□□□□ -0.48
GTF3C1-209ENST00000568569 FEM1CQ96JP0 617 aa12.05□□□□□ -0.48
GTF3C1-209ENST00000568569 KREMEN1Q96MU8 473 aa12.05□□□□□ -0.48
GTF3C1-209ENST00000568569 BOCQ9BWV1 1114 aa12.05□□□□□ -0.48
GTF3C1-209ENST00000568569 TNKS2Q9H2K2 1166 aa12.05□□□□□ -0.48
GTF3C1-209ENST00000568569 GOLPH3LQ9H4A5 285 aa12.05□□□□□ -0.48
GTF3C1-209ENST00000568569 STARD5Q9NSY2 213 aa12.05□□□□□ -0.48
GTF3C1-209ENST00000568569 ASNSD1Q9NWL6 643 aa12.05□□□□□ -0.48
GTF3C1-209ENST00000568569 SPASTQ9UBP0 616 aa12.05□□□□□ -0.48
GTF3C1-209ENST00000568569 CNTN6Q9UQ52 1028 aa12.05□□□□□ -0.48
GTF3C1-209ENST00000568569 FADS3Q9Y5Q0 445 aa12.05□□□□□ -0.48
GTF3C1-209ENST00000568569 PLD2O14939 933 aa12.04□□□□□ -0.48
GTF3C1-209ENST00000568569 EFSO43281 561 aa12.04□□□□□ -0.48
GTF3C1-209ENST00000568569 THAP12O43422 761 aa12.04□□□□□ -0.48
GTF3C1-209ENST00000568569 SMAD6O43541 496 aaKnown RBP12.04□□□□□ -0.48
GTF3C1-209ENST00000568569 AP1G1O43747 822 aa12.04□□□□□ -0.48
GTF3C1-209ENST00000568569 PAGE1O75459 146 aa12.04□□□□□ -0.48
GTF3C1-209ENST00000568569 GJB6O95452 261 aa12.04□□□□□ -0.48
GTF3C1-209ENST00000568569 ITGB2P05107 769 aa12.04□□□□□ -0.48
GTF3C1-209ENST00000568569 ITGB7P26010 798 aa12.04□□□□□ -0.48
GTF3C1-209ENST00000568569 EIF2B5Q13144 721 aaKnown RBP12.04□□□□□ -0.48
GTF3C1-209ENST00000568569 SGCGQ13326 291 aa12.04□□□□□ -0.48
GTF3C1-209ENST00000568569 PNOCQ13519 176 aa12.04□□□□□ -0.48
GTF3C1-209ENST00000568569 EFHC1Q5JVL4 640 aa12.04□□□□□ -0.48
GTF3C1-209ENST00000568569 LINGO4Q6UY18 593 aa12.04□□□□□ -0.48
GTF3C1-209ENST00000568569 USP53Q70EK8 1073 aa12.04□□□□□ -0.48
GTF3C1-209ENST00000568569 C14orf80Q86SX3 495 aa12.04□□□□□ -0.48
GTF3C1-209ENST00000568569 SETD3Q86TU7 594 aaPredicted RBP12.04□□□□□ -0.48
GTF3C1-209ENST00000568569 SLC35F3Q8IY50 421 aa12.04□□□□□ -0.48
GTF3C1-209ENST00000568569 DENND6BQ8NEG7 585 aa12.04□□□□□ -0.48
GTF3C1-209ENST00000568569 ZNF606Q8WXB4 792 aa12.04□□□□□ -0.48
GTF3C1-209ENST00000568569 SGF29Q96ES7 293 aa12.04□□□□□ -0.48
GTF3C1-209ENST00000568569 TBATAQ96M53 351 aa12.04□□□□□ -0.48
GTF3C1-209ENST00000568569 LENG8Q96PV6 779 aaPredicted RBP12.04□□□□□ -0.48
GTF3C1-209ENST00000568569 GSDMAQ96QA5 445 aa12.04□□□□□ -0.48
GTF3C1-209ENST00000568569 KLF6Q99612 283 aaPredicted RBP12.04□□□□□ -0.48
GTF3C1-209ENST00000568569 CCDC3Q9BQI4 270 aa12.04□□□□□ -0.48
GTF3C1-209ENST00000568569 ARHGAP9Q9BRR9 750 aa12.04□□□□□ -0.48
GTF3C1-209ENST00000568569 SIK2Q9H0K1 926 aa12.04□□□□□ -0.48
GTF3C1-209ENST00000568569 SYNDIG1Q9H7V2 258 aa12.04□□□□□ -0.48
GTF3C1-209ENST00000568569 APOBEC3BQ9UH17 382 aaKnown RBP12.04□□□□□ -0.48
GTF3C1-209ENST00000568569 PCDHGA7Q9Y5G6 932 aa12.04□□□□□ -0.48
GTF3C1-209ENST00000568569 WASF2Q9Y6W5 498 aa12.04□□□□□ -0.48
GTF3C1-209ENST00000568569 TDRD6O60522 2096 aaKnown RBP12.04□□□□□ -0.48
GTF3C1-209ENST00000568569 A0A0D9SEW6 157 aa12.03□□□□□ -0.48
GTF3C1-209ENST00000568569 LMO7DNF2Z398 122 aa12.03□□□□□ -0.48
GTF3C1-209ENST00000568569 PSMA7O14818 248 aa12.03□□□□□ -0.48
GTF3C1-209ENST00000568569 SPINT1O43278 529 aa12.03□□□□□ -0.48
GTF3C1-209ENST00000568569 CNTN5O94779 1100 aa12.03□□□□□ -0.48
GTF3C1-209ENST00000568569 SFTPCP11686 197 aa12.03□□□□□ -0.48
GTF3C1-209ENST00000568569 GNA15P30679 374 aa12.03□□□□□ -0.48
GTF3C1-209ENST00000568569 L1CAMP32004 1257 aa12.03□□□□□ -0.48
GTF3C1-209ENST00000568569 INHBCP55103 352 aa12.03□□□□□ -0.48
GTF3C1-209ENST00000568569 PFN3P60673 137 aa12.03□□□□□ -0.48
GTF3C1-209ENST00000568569 PTK2BQ14289 1009 aa12.03□□□□□ -0.48
GTF3C1-209ENST00000568569 LINC00303Q3SY05 128 aa12.03□□□□□ -0.48
GTF3C1-209ENST00000568569 CCDC40Q4G0X9 1142 aa12.03□□□□□ -0.48
GTF3C1-209ENST00000568569 ALFQ53S48 1182 aa12.03□□□□□ -0.48
GTF3C1-209ENST00000568569 PRRT3Q5FWE3 981 aa12.03□□□□□ -0.48
GTF3C1-209ENST00000568569 TPRG1LQ5T0D9 272 aa12.03□□□□□ -0.48
GTF3C1-209ENST00000568569 ESRP1Q6NXG1 681 aaKnown RBP12.03□□□□□ -0.48
GTF3C1-209ENST00000568569 RBFAQ8N0V3 343 aa12.03□□□□□ -0.48
GTF3C1-209ENST00000568569 EXTL1Q92935 676 aa12.03□□□□□ -0.48
GTF3C1-209ENST00000568569 CEP63Q96MT8 703 aa12.03□□□□□ -0.48
GTF3C1-209ENST00000568569 LRRC61Q9BV99 259 aa12.03□□□□□ -0.48
GTF3C1-209ENST00000568569 GTPBP4Q9BZE4 634 aaKnown RBP12.03□□□□□ -0.48
GTF3C1-209ENST00000568569 CEP44Q9C0F1 390 aa12.03□□□□□ -0.48
GTF3C1-209ENST00000568569 ACSL6Q9UKU0 697 aa12.03□□□□□ -0.48
GTF3C1-209ENST00000568569 IGLON5A6NGN9 336 aa12.02□□□□□ -0.49
GTF3C1-209ENST00000568569 TMX2-CTNND1H3BSU7 103 aa12.02□□□□□ -0.49
GTF3C1-209ENST00000568569 M0QYT0 321 aa12.02□□□□□ -0.49
GTF3C1-209ENST00000568569 NTN3O00634 580 aaPredicted RBP12.02□□□□□ -0.49
GTF3C1-209ENST00000568569 TSPAN6O43657 245 aa12.02□□□□□ -0.49
GTF3C1-209ENST00000568569 GCATO75600 419 aa12.02□□□□□ -0.49
GTF3C1-209ENST00000568569 GRAP2O75791 330 aa12.02□□□□□ -0.49
GTF3C1-209ENST00000568569 ENDOD1O94919 500 aa12.02□□□□□ -0.49
GTF3C1-209ENST00000568569 ADCY5O95622 1261 aa12.02□□□□□ -0.49
GTF3C1-209ENST00000568569 ANXA6P08133 673 aa12.02□□□□□ -0.49
GTF3C1-209ENST00000568569 SLC5A2P31639 672 aa12.02□□□□□ -0.49
GTF3C1-209ENST00000568569 SERPINH1P50454 418 aaKnown RBP12.02□□□□□ -0.49
GTF3C1-209ENST00000568569 THOP1P52888 689 aa12.02□□□□□ -0.49
GTF3C1-209ENST00000568569 ADKP55263 362 aaKnown RBP12.02□□□□□ -0.49
GTF3C1-209ENST00000568569 RETSATQ6NUM9 610 aa12.02□□□□□ -0.49
GTF3C1-209ENST00000568569 ZNF574Q6ZN55 896 aaPredicted RBP12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms