RNA–Protein interactions for RNA: ENST00000568561.5

NME3-211, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 1 (best)

Gene NME3, Length 813 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-211ENST00000568561 ATP13A1Q9HD20 1204 aa15.84■□□□□ 0.13
NME3-211ENST00000568561 ZNF212Q9UDV6 495 aa15.84■□□□□ 0.13
NME3-211ENST00000568561 FHOD1Q9Y613 1164 aa15.84■□□□□ 0.13
NME3-211ENST00000568561 RP1P56715 2156 aa15.84■□□□□ 0.13
NME3-211ENST00000568561 IGLV3-10A0A075B6K4 115 aa15.83■□□□□ 0.12
NME3-211ENST00000568561 A6NNZ2 444 aa15.83■□□□□ 0.12
NME3-211ENST00000568561 CSO75390 466 aaKnown RBP15.83■□□□□ 0.12
NME3-211ENST00000568561 ZMPSTE24O75844 475 aa15.83■□□□□ 0.12
NME3-211ENST00000568561 PAK4O96013 591 aaPredicted RBP15.83■□□□□ 0.12
NME3-211ENST00000568561 GKP32189 559 aa15.83■□□□□ 0.12
NME3-211ENST00000568561 SERPINH1P50454 418 aaKnown RBP15.83■□□□□ 0.12
NME3-211ENST00000568561 CCNHP51946 323 aaPredicted RBP15.83■□□□□ 0.12
NME3-211ENST00000568561 GABREP78334 506 aa15.83■□□□□ 0.12
NME3-211ENST00000568561 ARF5P84085 180 aa15.83■□□□□ 0.12
NME3-211ENST00000568561 CCDC15Q0P6D6 951 aa15.83■□□□□ 0.12
NME3-211ENST00000568561 FZD2Q14332 565 aa15.83■□□□□ 0.12
NME3-211ENST00000568561 MAN2A1Q16706 1144 aa15.83■□□□□ 0.12
NME3-211ENST00000568561 SLC25A52Q3SY17 297 aa15.83■□□□□ 0.12
NME3-211ENST00000568561 CDCP2Q5VXM1 449 aa15.83■□□□□ 0.12
NME3-211ENST00000568561 DPY19L2P1Q6NXN4 242 aa15.83■□□□□ 0.12
NME3-211ENST00000568561 CACTIN-AS1Q8N1I8 211 aa15.83■□□□□ 0.12
NME3-211ENST00000568561 ZNF548Q8NEK5 533 aaPredicted RBP15.83■□□□□ 0.12
NME3-211ENST00000568561 C18orf8Q96DM3 657 aa15.83■□□□□ 0.12
NME3-211ENST00000568561 PGAP3Q96FM1 320 aaPredicted RBP15.83■□□□□ 0.12
NME3-211ENST00000568561 PPP1R16AQ96I34 528 aa15.83■□□□□ 0.12
NME3-211ENST00000568561 BMFQ96LC9 184 aa15.83■□□□□ 0.12
NME3-211ENST00000568561 CFAP57Q96MR6 1250 aa15.83■□□□□ 0.12
NME3-211ENST00000568561 SLC17A9Q9BYT1 436 aa15.83■□□□□ 0.12
NME3-211ENST00000568561 TM6SF2Q9BZW4 377 aa15.83■□□□□ 0.12
NME3-211ENST00000568561 ZDHHC6Q9H6R6 413 aa15.83■□□□□ 0.12
NME3-211ENST00000568561 NLGN3Q9NZ94 848 aa15.83■□□□□ 0.12
NME3-211ENST00000568561 GGT7Q9UJ14 662 aa15.83■□□□□ 0.12
NME3-211ENST00000568561 ITM2BQ9Y287 266 aa15.83■□□□□ 0.12
NME3-211ENST00000568561 ILVBLA1L0T0 632 aa15.82■□□□□ 0.12
NME3-211ENST00000568561 K7ESM1 405 aa15.82■□□□□ 0.12
NME3-211ENST00000568561 USP12O75317 370 aa15.82■□□□□ 0.12
NME3-211ENST00000568561 F9P00740 461 aa15.82■□□□□ 0.12
NME3-211ENST00000568561 ALPPL2P10696 532 aa15.82■□□□□ 0.12
NME3-211ENST00000568561 CYP11B1P15538 503 aa15.82■□□□□ 0.12
NME3-211ENST00000568561 ITGB7P26010 798 aa15.82■□□□□ 0.12
NME3-211ENST00000568561 ACVRL1P37023 503 aa15.82■□□□□ 0.12
NME3-211ENST00000568561 ABL2P42684 1182 aa15.82■□□□□ 0.12
NME3-211ENST00000568561 GNA12Q03113 381 aa15.82■□□□□ 0.12
NME3-211ENST00000568561 C19orf57Q0VDD7 668 aa15.82■□□□□ 0.12
NME3-211ENST00000568561 DRAP1Q14919 205 aaPredicted RBP15.82■□□□□ 0.12
NME3-211ENST00000568561 TPD52L1Q16890 204 aaPredicted RBP15.82■□□□□ 0.12
NME3-211ENST00000568561 RETSATQ6NUM9 610 aa15.82■□□□□ 0.12
NME3-211ENST00000568561 CRTC1Q6UUV9 634 aa15.82■□□□□ 0.12
NME3-211ENST00000568561 KYAT3Q6YP21 454 aaKnown RBP15.82■□□□□ 0.12
NME3-211ENST00000568561 LEKR1Q6ZMV7 388 aa15.82■□□□□ 0.12
NME3-211ENST00000568561 GPR155Q7Z3F1 870 aa15.82■□□□□ 0.12
NME3-211ENST00000568561 EMC1Q8N766 993 aa15.82■□□□□ 0.12
NME3-211ENST00000568561 DEPDC7Q96QD5 511 aa15.82■□□□□ 0.12
NME3-211ENST00000568561 ZYG11BQ9C0D3 744 aa15.82■□□□□ 0.12
NME3-211ENST00000568561 GPR27Q9NS67 375 aa15.82■□□□□ 0.12
NME3-211ENST00000568561 KLF15Q9UIH9 416 aa15.82■□□□□ 0.12
NME3-211ENST00000568561 PAXBP1Q9Y5B6 917 aa15.82■□□□□ 0.12
NME3-211ENST00000568561 FADS3Q9Y5Q0 445 aa15.82■□□□□ 0.12
NME3-211ENST00000568561 ASH1LQ9NR48 2969 aaKnown RBP15.82■□□□□ 0.12
NME3-211ENST00000568561 SCAMP1O15126 338 aa15.81■□□□□ 0.12
NME3-211ENST00000568561 CASC3O15234 703 aaKnown RBP15.81■□□□□ 0.12
NME3-211ENST00000568561 PRKCSHP14314 528 aaPredicted RBP15.81■□□□□ 0.12
NME3-211ENST00000568561 L1CAMP32004 1257 aa15.81■□□□□ 0.12
NME3-211ENST00000568561 CDH5P33151 784 aaPredicted RBP15.81■□□□□ 0.12
NME3-211ENST00000568561 GABRB2P47870 512 aa15.81■□□□□ 0.12
NME3-211ENST00000568561 PCBP4P57723 403 aaKnown RBP15.81■□□□□ 0.12
NME3-211ENST00000568561 RPS21P63220 83 aaKnown RBP15.81■□□□□ 0.12
NME3-211ENST00000568561 ATP11AP98196 1134 aa15.81■□□□□ 0.12
NME3-211ENST00000568561 CDKN3Q16667 212 aa15.81■□□□□ 0.12
NME3-211ENST00000568561 CARD16Q5EG05 197 aa15.81■□□□□ 0.12
NME3-211ENST00000568561 LRRC73Q5JTD7 316 aa15.81■□□□□ 0.12
NME3-211ENST00000568561 MIIPQ5JXC2 388 aa15.81■□□□□ 0.12
NME3-211ENST00000568561 KIAA1161Q6NSJ0 714 aa15.81■□□□□ 0.12
NME3-211ENST00000568561 PCSK4Q6UW60 755 aa15.81■□□□□ 0.12
NME3-211ENST00000568561 PHLDB2Q86SQ0 1253 aa15.81■□□□□ 0.12
NME3-211ENST00000568561 NOP9Q86U38 636 aaKnown RBP15.81■□□□□ 0.12
NME3-211ENST00000568561 RYBPQ8N488 228 aaPredicted RBP15.81■□□□□ 0.12
NME3-211ENST00000568561 PCDH20Q8N6Y1 951 aaKnown RBP15.81■□□□□ 0.12
NME3-211ENST00000568561 IFI44Q8TCB0 444 aa15.81■□□□□ 0.12
NME3-211ENST00000568561 MAPK15Q8TD08 544 aa15.81■□□□□ 0.12
NME3-211ENST00000568561 CPA5Q8WXQ8 436 aa15.81■□□□□ 0.12
NME3-211ENST00000568561 C1orf74Q96LT6 269 aa15.81■□□□□ 0.12
NME3-211ENST00000568561 HEPHQ9BQS7 1158 aa15.81■□□□□ 0.12
NME3-211ENST00000568561 NDST4Q9H3R1 872 aa15.81■□□□□ 0.12
NME3-211ENST00000568561 METTL5Q9NRN9 209 aaKnown RBP15.81■□□□□ 0.12
NME3-211ENST00000568561 NDFIP2Q9NV92 336 aa15.81■□□□□ 0.12
NME3-211ENST00000568561 SPTY2D1-AS1A0A0U1RR47 76 aa15.8■□□□□ 0.12
NME3-211ENST00000568561 CPED1A4D0V7 1026 aa15.8■□□□□ 0.12
NME3-211ENST00000568561 IGLON5A6NGN9 336 aa15.8■□□□□ 0.12
NME3-211ENST00000568561 SPINT1O43278 529 aa15.8■□□□□ 0.12
NME3-211ENST00000568561 CD160O95971 181 aa15.8■□□□□ 0.12
NME3-211ENST00000568561 NME1P15531 152 aaKnown RBP15.8■□□□□ 0.12
NME3-211ENST00000568561 SCNN1AP37088 669 aa15.8■□□□□ 0.12
NME3-211ENST00000568561 BPIFB4P59827 614 aa15.8■□□□□ 0.12
NME3-211ENST00000568561 HNRNPKP61978 463 aaKnown RBP eCLIP15.8■□□□□ 0.12
NME3-211ENST00000568561 PDE1CQ14123 709 aaPredicted RBP15.8■□□□□ 0.12
NME3-211ENST00000568561 CDO1Q16878 200 aa15.8■□□□□ 0.12
NME3-211ENST00000568561 DEFB133Q30KQ1 61 aa15.8■□□□□ 0.12
NME3-211ENST00000568561 VWA3BQ502W6 1294 aa15.8■□□□□ 0.12
NME3-211ENST00000568561 NAA35Q5VZE5 725 aa15.8■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms