RNA–Protein interactions for RNA: ENST00000565821.1

CYCSP39-201, Transcript of cytochrome c, somatic pseudogene 39, humanhuman

BASIC

Gene CYCSP39, Length 309 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYCSP39-201ENST00000565821 AARSP49588 968 aaKnown RBP eCLIP3.29□□□□□ -1.88
CYCSP39-201ENST00000565821 VAV2P52735 878 aa3.29□□□□□ -1.88
CYCSP39-201ENST00000565821 DEFB103AP81534 67 aa3.29□□□□□ -1.88
CYCSP39-201ENST00000565821 GUCY1B3Q02153 619 aa3.29□□□□□ -1.88
CYCSP39-201ENST00000565821 ATP1A4Q13733 1029 aa3.29□□□□□ -1.88
CYCSP39-201ENST00000565821 UGCGQ16739 394 aa3.29□□□□□ -1.88
CYCSP39-201ENST00000565821 LRIT3Q3SXY7 679 aa3.29□□□□□ -1.88
CYCSP39-201ENST00000565821 NRN1LQ496H8 165 aa3.29□□□□□ -1.88
CYCSP39-201ENST00000565821 TIGD2Q4W5G0 525 aa3.29□□□□□ -1.88
CYCSP39-201ENST00000565821 USP39Q53GS9 565 aaKnown RBP3.29□□□□□ -1.88
CYCSP39-201ENST00000565821 CELF3Q5SZQ8 465 aaKnown RBP3.29□□□□□ -1.88
CYCSP39-201ENST00000565821 MARCH8Q5T0T0 291 aa3.29□□□□□ -1.88
CYCSP39-201ENST00000565821 GPATCH4Q5T3I0 446 aaKnown RBP3.29□□□□□ -1.88
CYCSP39-201ENST00000565821 ZNF618Q5T7W0 954 aa3.29□□□□□ -1.88
CYCSP39-201ENST00000565821 ARHGEF16Q5VV41 709 aa3.29□□□□□ -1.88
CYCSP39-201ENST00000565821 JAKMIP3Q5VZ66 844 aa3.29□□□□□ -1.88
CYCSP39-201ENST00000565821 RUFY3Q7L099 469 aa3.29□□□□□ -1.88
CYCSP39-201ENST00000565821 RRAGAQ7L523 313 aa3.29□□□□□ -1.88
CYCSP39-201ENST00000565821 TRMT1LQ7Z2T5 733 aaKnown RBP3.29□□□□□ -1.88
CYCSP39-201ENST00000565821 TMPRSS9Q7Z410 1059 aa3.29□□□□□ -1.88
CYCSP39-201ENST00000565821 MBD3L2Q8NHZ7 208 aaPredicted RBP3.29□□□□□ -1.88
CYCSP39-201ENST00000565821 SLC25A43Q8WUT9 341 aaPredicted RBP3.29□□□□□ -1.88
CYCSP39-201ENST00000565821 XAGE5Q8WWM1 108 aa3.29□□□□□ -1.88
CYCSP39-201ENST00000565821 ATG4AQ8WYN0 398 aa3.29□□□□□ -1.88
CYCSP39-201ENST00000565821 GOLGA1Q92805 767 aa3.29□□□□□ -1.88
CYCSP39-201ENST00000565821 LENG9Q96B70 501 aa3.29□□□□□ -1.88
CYCSP39-201ENST00000565821 EID2BQ96D98 161 aa3.29□□□□□ -1.88
CYCSP39-201ENST00000565821 UBXN10Q96LJ8 280 aa3.29□□□□□ -1.88
CYCSP39-201ENST00000565821 C8orf49Q96NF6 230 aa3.29□□□□□ -1.88
CYCSP39-201ENST00000565821 WWC2-AS2Q96NR7 200 aa3.29□□□□□ -1.88
CYCSP39-201ENST00000565821 INPP4AQ96PE3 977 aaPredicted RBP3.29□□□□□ -1.88
CYCSP39-201ENST00000565821 TRAPPC9Q96Q05 1148 aa3.29□□□□□ -1.88
CYCSP39-201ENST00000565821 CDK5RAP1Q96SZ6 601 aaKnown RBP3.29□□□□□ -1.88
CYCSP39-201ENST00000565821 RBM15Q96T37 977 aaKnown RBP eCLIP3.29□□□□□ -1.88
CYCSP39-201ENST00000565821 CDX2Q99626 313 aaPredicted RBP3.29□□□□□ -1.88
CYCSP39-201ENST00000565821 GPR20Q99678 358 aa3.29□□□□□ -1.88
CYCSP39-201ENST00000565821 RTKNQ9BST9 563 aa3.29□□□□□ -1.88
CYCSP39-201ENST00000565821 AGXT2Q9BYV1 514 aa3.29□□□□□ -1.88
CYCSP39-201ENST00000565821 AMBRA1Q9C0C7 1298 aa3.29□□□□□ -1.88
CYCSP39-201ENST00000565821 UNKLQ9H9P5 680 aaKnown RBP3.29□□□□□ -1.88
CYCSP39-201ENST00000565821 MLXIPQ9HAP2 919 aa3.29□□□□□ -1.88
CYCSP39-201ENST00000565821 CD248Q9HCU0 757 aa3.29□□□□□ -1.88
CYCSP39-201ENST00000565821 SETD4Q9NVD3 440 aa3.29□□□□□ -1.88
CYCSP39-201ENST00000565821 VPS54Q9P1Q0 977 aa3.29□□□□□ -1.88
CYCSP39-201ENST00000565821 NKX1-2Q9UD57 310 aaPredicted RBP3.29□□□□□ -1.88
CYCSP39-201ENST00000565821 FBXO40Q9UH90 709 aa3.29□□□□□ -1.88
CYCSP39-201ENST00000565821 NRBP1Q9UHY1 535 aa3.29□□□□□ -1.88
CYCSP39-201ENST00000565821 PNMA2Q9UL42 364 aa3.29□□□□□ -1.88
CYCSP39-201ENST00000565821 KCNJ14Q9UNX9 436 aa3.29□□□□□ -1.88
CYCSP39-201ENST00000565821 DRG1Q9Y295 367 aaKnown RBP3.29□□□□□ -1.88
CYCSP39-201ENST00000565821 DTNAQ9Y4J8 743 aa3.29□□□□□ -1.88
CYCSP39-201ENST00000565821 SCN10AQ9Y5Y9 1956 aa3.29□□□□□ -1.88
CYCSP39-201ENST00000565821 PTPRSQ13332 1948 aa3.29□□□□□ -1.88
CYCSP39-201ENST00000565821 ELP1O95163 1332 aa3.28□□□□□ -1.88
CYCSP39-201ENST00000565821 VPS13AQ96RL7 3174 aa3.28□□□□□ -1.88
CYCSP39-201ENST00000565821 COL4A6Q14031 1691 aa3.28□□□□□ -1.88
CYCSP39-201ENST00000565821 IGLV3-22A0A075B6J6 115 aa3.28□□□□□ -1.88
CYCSP39-201ENST00000565821 A0A0U1RQG5 324 aaPredicted RBP3.28□□□□□ -1.88
CYCSP39-201ENST00000565821 GCOM1H8Y6P7 765 aaPredicted RBP3.28□□□□□ -1.88
CYCSP39-201ENST00000565821 DDX39AO00148 427 aaKnown RBP3.28□□□□□ -1.88
CYCSP39-201ENST00000565821 ZBTB43O43298 467 aa3.28□□□□□ -1.88
CYCSP39-201ENST00000565821 LPXNO60711 386 aa3.28□□□□□ -1.88
CYCSP39-201ENST00000565821 CSDE1O75534 798 aaKnown RBP3.28□□□□□ -1.88
CYCSP39-201ENST00000565821 KRT38O76015 456 aa3.28□□□□□ -1.88
CYCSP39-201ENST00000565821 STBD1O95210 358 aa3.28□□□□□ -1.88
CYCSP39-201ENST00000565821 VNN1O95497 513 aa3.28□□□□□ -1.88
CYCSP39-201ENST00000565821 CHRNA1P02708 482 aa3.28□□□□□ -1.88
CYCSP39-201ENST00000565821 LGALS2P05162 132 aa3.28□□□□□ -1.88
CYCSP39-201ENST00000565821 IQCF3P0C7M6 154 aa3.28□□□□□ -1.88
CYCSP39-201ENST00000565821 POLR2MP0CAP2 368 aa3.28□□□□□ -1.88
CYCSP39-201ENST00000565821 SMIM10L2AP0DMW4 78 aa3.28□□□□□ -1.88
CYCSP39-201ENST00000565821 SMIM10L2BP0DMW5 78 aa3.28□□□□□ -1.88
CYCSP39-201ENST00000565821 PCP11498 1178 aaKnown RBP3.28□□□□□ -1.88
CYCSP39-201ENST00000565821 CASTP20810 708 aaKnown RBP3.28□□□□□ -1.88
CYCSP39-201ENST00000565821 CNTFP26441 200 aa3.28□□□□□ -1.88
CYCSP39-201ENST00000565821 GSTM5P46439 218 aa3.28□□□□□ -1.88
CYCSP39-201ENST00000565821 PAPOLAP51003 745 aaKnown RBP3.28□□□□□ -1.88
CYCSP39-201ENST00000565821 ADAM17P78536 824 aa3.28□□□□□ -1.88
CYCSP39-201ENST00000565821 TFF2Q03403 129 aa3.28□□□□□ -1.88
CYCSP39-201ENST00000565821 ITIH3Q06033 890 aa3.28□□□□□ -1.88
CYCSP39-201ENST00000565821 SCAPQ12770 1279 aa3.28□□□□□ -1.88
CYCSP39-201ENST00000565821 DRP2Q13474 957 aa3.28□□□□□ -1.88
CYCSP39-201ENST00000565821 CSHL1Q14406 222 aa3.28□□□□□ -1.88
CYCSP39-201ENST00000565821 PPP2R5BQ15173 497 aa3.28□□□□□ -1.88
CYCSP39-201ENST00000565821 STXBP2Q15833 593 aa3.28□□□□□ -1.88
CYCSP39-201ENST00000565821 PTGISQ16647 500 aa3.28□□□□□ -1.88
CYCSP39-201ENST00000565821 ME3Q16798 604 aa3.28□□□□□ -1.88
CYCSP39-201ENST00000565821 BTBD16Q32M84 506 aa3.28□□□□□ -1.88
CYCSP39-201ENST00000565821 BEAN1Q3B7T3 259 aa3.28□□□□□ -1.88
CYCSP39-201ENST00000565821 ZNF569Q5MCW4 686 aa3.28□□□□□ -1.88
CYCSP39-201ENST00000565821 SLC9A4Q6AI14 798 aa3.28□□□□□ -1.88
CYCSP39-201ENST00000565821 ABLIM2Q6H8Q1 611 aa3.28□□□□□ -1.88
CYCSP39-201ENST00000565821 LIN54Q6MZP7 749 aa3.28□□□□□ -1.88
CYCSP39-201ENST00000565821 CYP26C1Q6V0L0 522 aa3.28□□□□□ -1.88
CYCSP39-201ENST00000565821 RAB11FIP2Q7L804 512 aa3.28□□□□□ -1.88
CYCSP39-201ENST00000565821 MOGAT3Q86VF5 341 aa3.28□□□□□ -1.88
CYCSP39-201ENST00000565821 CAND1Q86VP6 1230 aaKnown RBP3.28□□□□□ -1.88
CYCSP39-201ENST00000565821 TICAM2Q86XR7 235 aa3.28□□□□□ -1.88
CYCSP39-201ENST00000565821 P3H2Q8IVL5 708 aa3.28□□□□□ -1.88
CYCSP39-201ENST00000565821 SLC44A2Q8IWA5 706 aaPredicted RBP3.28□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms