RNA–Protein interactions for RNA: ENST00000564638.1

MAP1LC3B-205, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 2

Gene MAP1LC3B, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-205ENST00000564638 A0A1W2PPM1 405 aa7.57□□□□□ -1.2
MAP1LC3B-205ENST00000564638 FAM159BA6NKW6 160 aa7.57□□□□□ -1.2
MAP1LC3B-205ENST00000564638 TRIM49D1C9J1S8 452 aa7.57□□□□□ -1.2
MAP1LC3B-205ENST00000564638 MYO1CO00159 1063 aa7.57□□□□□ -1.2
MAP1LC3B-205ENST00000564638 KCNK1O00180 336 aa7.57□□□□□ -1.2
MAP1LC3B-205ENST00000564638 AP3B1O00203 1094 aa7.57□□□□□ -1.2
MAP1LC3B-205ENST00000564638 NRG2O14511 850 aaPredicted RBP7.57□□□□□ -1.2
MAP1LC3B-205ENST00000564638 MSI1O43347 362 aaKnown RBP7.57□□□□□ -1.2
MAP1LC3B-205ENST00000564638 TYROBPO43914 113 aa7.57□□□□□ -1.2
MAP1LC3B-205ENST00000564638 PAGE1O75459 146 aa7.57□□□□□ -1.2
MAP1LC3B-205ENST00000564638 SUN1O94901 812 aa7.57□□□□□ -1.2
MAP1LC3B-205ENST00000564638 ASMTLO95671 621 aa7.57□□□□□ -1.2
MAP1LC3B-205ENST00000564638 AP2A1O95782 977 aa7.57□□□□□ -1.2
MAP1LC3B-205ENST00000564638 SNRPAP09012 282 aaKnown RBP7.57□□□□□ -1.2
MAP1LC3B-205ENST00000564638 KRT4P19013 534 aa7.57□□□□□ -1.2
MAP1LC3B-205ENST00000564638 CNTFP26441 200 aa7.57□□□□□ -1.2
MAP1LC3B-205ENST00000564638 MGAT1P26572 445 aa7.57□□□□□ -1.2
MAP1LC3B-205ENST00000564638 CDC25CP30307 473 aa7.57□□□□□ -1.2
MAP1LC3B-205ENST00000564638 PSEN1P49768 467 aa7.57□□□□□ -1.2
MAP1LC3B-205ENST00000564638 WDR4P57081 412 aaKnown RBP7.57□□□□□ -1.2
MAP1LC3B-205ENST00000564638 TBX4P57082 545 aa7.57□□□□□ -1.2
MAP1LC3B-205ENST00000564638 SESN2P58004 480 aaPredicted RBP7.57□□□□□ -1.2
MAP1LC3B-205ENST00000564638 NRG1Q02297 640 aaPredicted RBP7.57□□□□□ -1.2
MAP1LC3B-205ENST00000564638 TCF15Q12870 199 aa7.57□□□□□ -1.2
MAP1LC3B-205ENST00000564638 IFT88Q13099 833 aa7.57□□□□□ -1.2
MAP1LC3B-205ENST00000564638 PRPSAP1Q14558 356 aa7.57□□□□□ -1.2
MAP1LC3B-205ENST00000564638 PDK4Q16654 411 aa7.57□□□□□ -1.2
MAP1LC3B-205ENST00000564638 ARHGAP15Q53QZ3 475 aa7.57□□□□□ -1.2
MAP1LC3B-205ENST00000564638 GPR158Q5T848 1215 aa7.57□□□□□ -1.2
MAP1LC3B-205ENST00000564638 MANEALQ5VSG8 457 aa7.57□□□□□ -1.2
MAP1LC3B-205ENST00000564638 NUGGCQ68CJ6 796 aa7.57□□□□□ -1.2
MAP1LC3B-205ENST00000564638 TIGD7Q6NT04 549 aaPredicted RBP7.57□□□□□ -1.2
MAP1LC3B-205ENST00000564638 C6orf89Q6UWU4 347 aa7.57□□□□□ -1.2
MAP1LC3B-205ENST00000564638 RGS9BPQ6ZS82 235 aa7.57□□□□□ -1.2
MAP1LC3B-205ENST00000564638 MARK2Q7KZI7 788 aaKnown RBP7.57□□□□□ -1.2
MAP1LC3B-205ENST00000564638 PIGWQ7Z7B1 504 aa7.57□□□□□ -1.2
MAP1LC3B-205ENST00000564638 TMC8Q8IU68 726 aa7.57□□□□□ -1.2
MAP1LC3B-205ENST00000564638 GJD3Q8N144 294 aa7.57□□□□□ -1.2
MAP1LC3B-205ENST00000564638 LZTR1Q8N653 840 aa7.57□□□□□ -1.2
MAP1LC3B-205ENST00000564638 ATP6V0D2Q8N8Y2 350 aa7.57□□□□□ -1.2
MAP1LC3B-205ENST00000564638 BANPQ8N9N5 519 aa7.57□□□□□ -1.2
MAP1LC3B-205ENST00000564638 LEMD2Q8NC56 503 aa7.57□□□□□ -1.2
MAP1LC3B-205ENST00000564638 NETO2Q8NC67 525 aa7.57□□□□□ -1.2
MAP1LC3B-205ENST00000564638 SHKBP1Q8TBC3 707 aa7.57□□□□□ -1.2
MAP1LC3B-205ENST00000564638 LRRC8CQ8TDW0 803 aa7.57□□□□□ -1.2
MAP1LC3B-205ENST00000564638 DENND1AQ8TEH3 1009 aa7.57□□□□□ -1.2
MAP1LC3B-205ENST00000564638 MZB1Q8WU39 189 aa7.57□□□□□ -1.2
MAP1LC3B-205ENST00000564638 FGF13Q92913 245 aa7.57□□□□□ -1.2
MAP1LC3B-205ENST00000564638 FBXO32Q969P5 355 aa7.57□□□□□ -1.2
MAP1LC3B-205ENST00000564638 GRAMD1AQ96CP6 724 aa7.57□□□□□ -1.2
MAP1LC3B-205ENST00000564638 MTBPQ96DY7 904 aa7.57□□□□□ -1.2
MAP1LC3B-205ENST00000564638 SPATA17Q96L03 361 aa7.57□□□□□ -1.2
MAP1LC3B-205ENST00000564638 ELAC2Q9BQ52 826 aaKnown RBP7.57□□□□□ -1.2
MAP1LC3B-205ENST00000564638 SIK2Q9H0K1 926 aa7.57□□□□□ -1.2
MAP1LC3B-205ENST00000564638 LRRC40Q9H9A6 602 aa7.57□□□□□ -1.2
MAP1LC3B-205ENST00000564638 ACTR5Q9H9F9 607 aaPredicted RBP7.57□□□□□ -1.2
MAP1LC3B-205ENST00000564638 NMUR1Q9HB89 426 aa7.57□□□□□ -1.2
MAP1LC3B-205ENST00000564638 TRPC7Q9HCX4 862 aa7.57□□□□□ -1.2
MAP1LC3B-205ENST00000564638 COMMD8Q9NX08 183 aa7.57□□□□□ -1.2
MAP1LC3B-205ENST00000564638 GMIPQ9P107 970 aa7.57□□□□□ -1.2
MAP1LC3B-205ENST00000564638 UXTQ9UBK9 157 aaPredicted RBP7.57□□□□□ -1.2
MAP1LC3B-205ENST00000564638 LIMD1Q9UGP4 676 aa7.57□□□□□ -1.2
MAP1LC3B-205ENST00000564638 SFMBT1Q9UHJ3 866 aa7.57□□□□□ -1.2
MAP1LC3B-205ENST00000564638 CDH7Q9ULB5 785 aa7.57□□□□□ -1.2
MAP1LC3B-205ENST00000564638 TLR6Q9Y2C9 796 aa7.57□□□□□ -1.2
MAP1LC3B-205ENST00000564638 SETXQ7Z333 2677 aaKnown RBP7.57□□□□□ -1.2
MAP1LC3B-205ENST00000564638 ATRXP46100 2492 aa7.57□□□□□ -1.2
MAP1LC3B-205ENST00000564638 FAM186AA6NE01 2351 aa7.56□□□□□ -1.2
MAP1LC3B-205ENST00000564638 ARHGAP42A6NI28 874 aa7.56□□□□□ -1.2
MAP1LC3B-205ENST00000564638 LOC730098B7Z3J9 87 aa7.56□□□□□ -1.2
MAP1LC3B-205ENST00000564638 E9PAM4 449 aa7.56□□□□□ -1.2
MAP1LC3B-205ENST00000564638 DFFAO00273 331 aa7.56□□□□□ -1.2
MAP1LC3B-205ENST00000564638 COPEO14579 308 aa7.56□□□□□ -1.2
MAP1LC3B-205ENST00000564638 SNX3O60493 162 aa7.56□□□□□ -1.2
MAP1LC3B-205ENST00000564638 NEBLO76041 1014 aa7.56□□□□□ -1.2
MAP1LC3B-205ENST00000564638 PAPLNO95428 1278 aa7.56□□□□□ -1.2
MAP1LC3B-205ENST00000564638 FGF19O95750 216 aa7.56□□□□□ -1.2
MAP1LC3B-205ENST00000564638 MOCS2O96007 188 aaPredicted RBP7.56□□□□□ -1.2
MAP1LC3B-205ENST00000564638 OAS1P00973 400 aaKnown RBP7.56□□□□□ -1.2
MAP1LC3B-205ENST00000564638 ASGR2P07307 311 aa7.56□□□□□ -1.2
MAP1LC3B-205ENST00000564638 HMGA1P17096 107 aaKnown RBP7.56□□□□□ -1.2
MAP1LC3B-205ENST00000564638 NFKB1P19838 968 aa7.56□□□□□ -1.2
MAP1LC3B-205ENST00000564638 TAC1P20366 129 aa7.56□□□□□ -1.2
MAP1LC3B-205ENST00000564638 YWHAQP27348 245 aa7.56□□□□□ -1.2
MAP1LC3B-205ENST00000564638 RPA3P35244 121 aaPredicted RBP7.56□□□□□ -1.2
MAP1LC3B-205ENST00000564638 CCNFP41002 786 aa7.56□□□□□ -1.2
MAP1LC3B-205ENST00000564638 GRIA1P42261 906 aa7.56□□□□□ -1.2
MAP1LC3B-205ENST00000564638 USP46P62068 366 aa7.56□□□□□ -1.2
MAP1LC3B-205ENST00000564638 SLC18A2Q05940 514 aa7.56□□□□□ -1.2
MAP1LC3B-205ENST00000564638 MGAT5Q09328 741 aa7.56□□□□□ -1.2
MAP1LC3B-205ENST00000564638 ZBTB17Q13105 803 aa7.56□□□□□ -1.2
MAP1LC3B-205ENST00000564638 MTA1Q13330 715 aa7.56□□□□□ -1.2
MAP1LC3B-205ENST00000564638 EIF4EBP2Q13542 120 aaPredicted RBP7.56□□□□□ -1.2
MAP1LC3B-205ENST00000564638 TRIP4Q15650 581 aaPredicted RBP7.56□□□□□ -1.2
MAP1LC3B-205ENST00000564638 ANO4Q32M45 955 aa7.56□□□□□ -1.2
MAP1LC3B-205ENST00000564638 TEX44Q53QW1 395 aa7.56□□□□□ -1.2
MAP1LC3B-205ENST00000564638 PRSS36Q5K4E3 855 aa7.56□□□□□ -1.2
MAP1LC3B-205ENST00000564638 SPANXN3Q5MJ09 141 aa7.56□□□□□ -1.2
MAP1LC3B-205ENST00000564638 STXBP5Q5T5C0 1151 aa7.56□□□□□ -1.2
MAP1LC3B-205ENST00000564638 NAPEPLDQ6IQ20 393 aa7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms