RNA–Protein interactions for RNA: ENST00000562199.1

CAPN3-211, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 385 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-211ENST00000562199 MC1RQ01726 317 aa5.62□□□□□ -1.51
CAPN3-211ENST00000562199 PLOD1Q02809 727 aaPredicted RBP5.62□□□□□ -1.51
CAPN3-211ENST00000562199 KLC1Q07866 573 aa5.62□□□□□ -1.51
CAPN3-211ENST00000562199 STK4Q13043 487 aa5.62□□□□□ -1.51
CAPN3-211ENST00000562199 PPIL2Q13356 520 aa5.62□□□□□ -1.51
CAPN3-211ENST00000562199 PON2Q15165 354 aa5.62□□□□□ -1.51
CAPN3-211ENST00000562199 SF3B4Q15427 424 aaKnown RBP eCLIP5.62□□□□□ -1.51
CAPN3-211ENST00000562199 PARP6Q2NL67 630 aa5.62□□□□□ -1.51
CAPN3-211ENST00000562199 ZACNQ401N2 412 aa5.62□□□□□ -1.51
CAPN3-211ENST00000562199 SLC9B1Q4ZJI4 515 aa5.62□□□□□ -1.51
CAPN3-211ENST00000562199 SEZ6Q53EL9 994 aa5.62□□□□□ -1.51
CAPN3-211ENST00000562199 RNF220Q5VTB9 566 aa5.62□□□□□ -1.51
CAPN3-211ENST00000562199 CACHD1Q5VU97 1274 aa5.62□□□□□ -1.51
CAPN3-211ENST00000562199 YOD1Q5VVQ6 348 aaPredicted RBP5.62□□□□□ -1.51
CAPN3-211ENST00000562199 ACAD10Q6JQN1 1059 aa5.62□□□□□ -1.51
CAPN3-211ENST00000562199 TPGS1Q6ZTW0 290 aa5.62□□□□□ -1.51
CAPN3-211ENST00000562199 C3orf62Q6ZUJ4 267 aa5.62□□□□□ -1.51
CAPN3-211ENST00000562199 DSG4Q86SJ6 1040 aa5.62□□□□□ -1.51
CAPN3-211ENST00000562199 KBTBD6Q86V97 674 aa5.62□□□□□ -1.51
CAPN3-211ENST00000562199 ZNF677Q86XU0 584 aa5.62□□□□□ -1.51
CAPN3-211ENST00000562199 MAP7D3Q8IWC1 876 aa5.62□□□□□ -1.51
CAPN3-211ENST00000562199 PHF6Q8IWS0 365 aaKnown RBP eCLIP5.62□□□□□ -1.51
CAPN3-211ENST00000562199 TP53INP2Q8IXH6 220 aa5.62□□□□□ -1.51
CAPN3-211ENST00000562199 GLB1L3Q8NCI6 653 aaPredicted RBP5.62□□□□□ -1.51
CAPN3-211ENST00000562199 OR10Z1Q8NGY1 313 aa5.62□□□□□ -1.51
CAPN3-211ENST00000562199 OR2W6PQ8NHA6 318 aa5.62□□□□□ -1.51
CAPN3-211ENST00000562199 MAGEC3Q8TD91 643 aa5.62□□□□□ -1.51
CAPN3-211ENST00000562199 KCNG4Q8TDN1 519 aa5.62□□□□□ -1.51
CAPN3-211ENST00000562199 PDCD6IPQ8WUM4 868 aaKnown RBP5.62□□□□□ -1.51
CAPN3-211ENST00000562199 RAD51AP1Q96B01 352 aa5.62□□□□□ -1.51
CAPN3-211ENST00000562199 HMCESQ96FZ2 354 aa5.62□□□□□ -1.51
CAPN3-211ENST00000562199 MASTLQ96GX5 879 aa5.62□□□□□ -1.51
CAPN3-211ENST00000562199 KAZALD1Q96I82 304 aa5.62□□□□□ -1.51
CAPN3-211ENST00000562199 ZBED3Q96IU2 234 aaPredicted RBP5.62□□□□□ -1.51
CAPN3-211ENST00000562199 EDEM2Q9BV94 578 aa5.62□□□□□ -1.51
CAPN3-211ENST00000562199 GPR61Q9BZJ8 451 aa5.62□□□□□ -1.51
CAPN3-211ENST00000562199 CEP44Q9C0F1 390 aa5.62□□□□□ -1.51
CAPN3-211ENST00000562199 TMEM206Q9H813 350 aa5.62□□□□□ -1.51
CAPN3-211ENST00000562199 CNTD2Q9H8S5 307 aa5.62□□□□□ -1.51
CAPN3-211ENST00000562199 SLC52A2Q9HAB3 445 aa5.62□□□□□ -1.51
CAPN3-211ENST00000562199 LRRC4CQ9HCJ2 640 aa5.62□□□□□ -1.51
CAPN3-211ENST00000562199 TRIM39Q9HCM9 518 aa5.62□□□□□ -1.51
CAPN3-211ENST00000562199 SOHLH2Q9NX45 425 aa5.62□□□□□ -1.51
CAPN3-211ENST00000562199 TMOD3Q9NYL9 352 aa5.62□□□□□ -1.51
CAPN3-211ENST00000562199 VPS54Q9P1Q0 977 aa5.62□□□□□ -1.51
CAPN3-211ENST00000562199 LRFN1Q9P244 771 aa5.62□□□□□ -1.51
CAPN3-211ENST00000562199 KLHL20Q9Y2M5 609 aa5.62□□□□□ -1.51
CAPN3-211ENST00000562199 MAP3K2Q9Y2U5 619 aa5.62□□□□□ -1.51
CAPN3-211ENST00000562199 ACTL7BQ9Y614 415 aa5.62□□□□□ -1.51
CAPN3-211ENST00000562199 CLCA3PQ9Y6N3 262 aa5.62□□□□□ -1.51
CAPN3-211ENST00000562199 CARMIL3Q8ND23 1372 aa5.62□□□□□ -1.51
CAPN3-211ENST00000562199 C4AP0C0L4 1744 aa5.62□□□□□ -1.51
CAPN3-211ENST00000562199 C4BP0C0L5 1744 aa5.62□□□□□ -1.51
CAPN3-211ENST00000562199 KIAA1217Q5T5P2 1943 aa5.62□□□□□ -1.51
CAPN3-211ENST00000562199 LAMB4A4D0S4 1761 aa5.61□□□□□ -1.51
CAPN3-211ENST00000562199 RHPN2P1A8MT19 583 aa5.61□□□□□ -1.51
CAPN3-211ENST00000562199 FADS2P1A8MWK0 482 aa5.61□□□□□ -1.51
CAPN3-211ENST00000562199 UPK3BL1B0FP48 263 aa5.61□□□□□ -1.51
CAPN3-211ENST00000562199 GOLGA8KD6RF30 607 aa5.61□□□□□ -1.51
CAPN3-211ENST00000562199 UPK3BL2E5RIL1 263 aa5.61□□□□□ -1.51
CAPN3-211ENST00000562199 GTPBP1O00178 669 aaKnown RBP5.61□□□□□ -1.51
CAPN3-211ENST00000562199 ACKR2O00590 384 aa5.61□□□□□ -1.51
CAPN3-211ENST00000562199 OGTO15294 1046 aa5.61□□□□□ -1.51
CAPN3-211ENST00000562199 PRODHO43272 600 aa5.61□□□□□ -1.51
CAPN3-211ENST00000562199 GATCO43716 136 aaKnown RBP5.61□□□□□ -1.51
CAPN3-211ENST00000562199 NUDT21O43809 227 aaKnown RBP5.61□□□□□ -1.51
CAPN3-211ENST00000562199 CPNE3O75131 537 aaKnown RBP5.61□□□□□ -1.51
CAPN3-211ENST00000562199 MED24O75448 989 aa5.61□□□□□ -1.51
CAPN3-211ENST00000562199 DNAJB5O75953 348 aa5.61□□□□□ -1.51
CAPN3-211ENST00000562199 CPDO75976 1380 aa5.61□□□□□ -1.51
CAPN3-211ENST00000562199 MYO1DO94832 1006 aa5.61□□□□□ -1.51
CAPN3-211ENST00000562199 HMGCRP04035 888 aa5.61□□□□□ -1.51
CAPN3-211ENST00000562199 FYNP06241 537 aa5.61□□□□□ -1.51
CAPN3-211ENST00000562199 CYP21A2P08686 494 aa5.61□□□□□ -1.51
CAPN3-211ENST00000562199 KRT7P08729 469 aa5.61□□□□□ -1.51
CAPN3-211ENST00000562199 ACADMP11310 421 aa5.61□□□□□ -1.51
CAPN3-211ENST00000562199 ODC1P11926 461 aa5.61□□□□□ -1.51
CAPN3-211ENST00000562199 PLCG1P19174 1290 aa5.61□□□□□ -1.51
CAPN3-211ENST00000562199 CPN2P22792 545 aa5.61□□□□□ -1.51
CAPN3-211ENST00000562199 CTSSP25774 331 aa5.61□□□□□ -1.51
CAPN3-211ENST00000562199 ITGB8P26012 769 aa5.61□□□□□ -1.51
CAPN3-211ENST00000562199 GBP1P32455 592 aa5.61□□□□□ -1.51
CAPN3-211ENST00000562199 BUD31P41223 144 aaPredicted RBP5.61□□□□□ -1.51
CAPN3-211ENST00000562199 KCNJ5P48544 419 aa5.61□□□□□ -1.51
CAPN3-211ENST00000562199 GNAQP50148 359 aa5.61□□□□□ -1.51
CAPN3-211ENST00000562199 DNM2P50570 870 aa5.61□□□□□ -1.51
CAPN3-211ENST00000562199 METAP1P53582 386 aa5.61□□□□□ -1.51
CAPN3-211ENST00000562199 PSMC5P62195 406 aa5.61□□□□□ -1.51
CAPN3-211ENST00000562199 CYP27A1Q02318 531 aa5.61□□□□□ -1.51
CAPN3-211ENST00000562199 TEFQ10587 303 aa5.61□□□□□ -1.51
CAPN3-211ENST00000562199 FSTL1Q12841 308 aa5.61□□□□□ -1.51
CAPN3-211ENST00000562199 IL24Q13007 206 aa5.61□□□□□ -1.51
CAPN3-211ENST00000562199 CALCOCO2Q13137 446 aa5.61□□□□□ -1.51
CAPN3-211ENST00000562199 DDX39BQ13838 428 aaKnown RBP5.61□□□□□ -1.51
CAPN3-211ENST00000562199 PDK1Q15118 436 aa5.61□□□□□ -1.51
CAPN3-211ENST00000562199 KRT31Q15323 416 aa5.61□□□□□ -1.51
CAPN3-211ENST00000562199 DLGAP5Q15398 846 aa5.61□□□□□ -1.51
CAPN3-211ENST00000562199 SMAD2Q15796 467 aaKnown RBP5.61□□□□□ -1.51
CAPN3-211ENST00000562199 PFKFB4Q16877 469 aa5.61□□□□□ -1.51
CAPN3-211ENST00000562199 MSMPQ1L6U9 139 aa5.61□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms