RNA–Protein interactions for RNA: ENST00000559937.1

SMAD3-212, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 579 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-212ENST00000559937 KITP10721 976 aa8.2□□□□□ -1.1
SMAD3-212ENST00000559937 GM2AP17900 193 aa8.2□□□□□ -1.1
SMAD3-212ENST00000559937 KCNA4P22459 653 aa8.2□□□□□ -1.1
SMAD3-212ENST00000559937 ADSLP30566 484 aaPredicted RBP8.2□□□□□ -1.1
SMAD3-212ENST00000559937 SERPINB5P36952 375 aa8.2□□□□□ -1.1
SMAD3-212ENST00000559937 ARCN1P48444 511 aaKnown RBP8.2□□□□□ -1.1
SMAD3-212ENST00000559937 NUMBP49757 651 aa8.2□□□□□ -1.1
SMAD3-212ENST00000559937 IDH3AP50213 366 aa8.2□□□□□ -1.1
SMAD3-212ENST00000559937 TUBP50607 506 aa8.2□□□□□ -1.1
SMAD3-212ENST00000559937 PAPOLAP51003 745 aaKnown RBP8.2□□□□□ -1.1
SMAD3-212ENST00000559937 KPNA1P52294 538 aaPredicted RBP8.2□□□□□ -1.1
SMAD3-212ENST00000559937 YBEYP58557 167 aaPredicted RBP8.2□□□□□ -1.1
SMAD3-212ENST00000559937 IRX4P78413 519 aa8.2□□□□□ -1.1
SMAD3-212ENST00000559937 ELAVL2Q12926 359 aaKnown RBP8.2□□□□□ -1.1
SMAD3-212ENST00000559937 LAMB3Q13751 1172 aa8.2□□□□□ -1.1
SMAD3-212ENST00000559937 ITGA9Q13797 1035 aa8.2□□□□□ -1.1
SMAD3-212ENST00000559937 BTG3Q14201 252 aaPredicted RBP8.2□□□□□ -1.1
SMAD3-212ENST00000559937 GRM3Q14832 879 aa8.2□□□□□ -1.1
SMAD3-212ENST00000559937 ZRSR2Q15696 482 aaKnown RBP8.2□□□□□ -1.1
SMAD3-212ENST00000559937 SLC14A2Q15849 920 aa8.2□□□□□ -1.1
SMAD3-212ENST00000559937 PPM1JQ5JR12 505 aa8.2□□□□□ -1.1
SMAD3-212ENST00000559937 CLLU1OSQ5K130 101 aa8.2□□□□□ -1.1
SMAD3-212ENST00000559937 PIK3R6Q5UE93 754 aa8.2□□□□□ -1.1
SMAD3-212ENST00000559937 ZNF280DQ6N043 979 aa8.2□□□□□ -1.1
SMAD3-212ENST00000559937 KDELC1Q6UW63 502 aa8.2□□□□□ -1.1
SMAD3-212ENST00000559937 OTOP3Q7RTS5 596 aa8.2□□□□□ -1.1
SMAD3-212ENST00000559937 RTN4RL1Q86UN2 441 aaPredicted RBP8.2□□□□□ -1.1
SMAD3-212ENST00000559937 ZNF280BQ86YH2 543 aa8.2□□□□□ -1.1
SMAD3-212ENST00000559937 KIRREL3Q8IZU9 778 aa8.2□□□□□ -1.1
SMAD3-212ENST00000559937 MAB21L3Q8N8X9 362 aa8.2□□□□□ -1.1
SMAD3-212ENST00000559937 SPPL2BQ8TCT7 592 aa8.2□□□□□ -1.1
SMAD3-212ENST00000559937 USP33Q8TEY7 942 aa8.2□□□□□ -1.1
SMAD3-212ENST00000559937 C2orf15Q8WU43 125 aaKnown RBP8.2□□□□□ -1.1
SMAD3-212ENST00000559937 STYXQ8WUJ0 223 aa8.2□□□□□ -1.1
SMAD3-212ENST00000559937 PDCD6IPQ8WUM4 868 aaKnown RBP8.2□□□□□ -1.1
SMAD3-212ENST00000559937 NSMCE1Q8WV22 266 aa8.2□□□□□ -1.1
SMAD3-212ENST00000559937 LINC01599Q8WXQ3 324 aa8.2□□□□□ -1.1
SMAD3-212ENST00000559937 PEX13Q92968 403 aa8.2□□□□□ -1.1
SMAD3-212ENST00000559937 IMP4Q96G21 291 aaKnown RBP8.2□□□□□ -1.1
SMAD3-212ENST00000559937 BTN2A3PQ96KV6 586 aa8.2□□□□□ -1.1
SMAD3-212ENST00000559937 SPATA17Q96L03 361 aa8.2□□□□□ -1.1
SMAD3-212ENST00000559937 GLT1D1Q96MS3 346 aa8.2□□□□□ -1.1
SMAD3-212ENST00000559937 FAM193BQ96PV7 902 aaPredicted RBP8.2□□□□□ -1.1
SMAD3-212ENST00000559937 AGAP2Q99490 1192 aa8.2□□□□□ -1.1
SMAD3-212ENST00000559937 APOL2Q9BQE5 337 aa8.2□□□□□ -1.1
SMAD3-212ENST00000559937 FSD1LQ9BXM9 530 aa8.2□□□□□ -1.1
SMAD3-212ENST00000559937 CFHR5Q9BXR6 569 aa8.2□□□□□ -1.1
SMAD3-212ENST00000559937 ACE2Q9BYF1 805 aaPredicted RBP8.2□□□□□ -1.1
SMAD3-212ENST00000559937 ZYG11BQ9C0D3 744 aa8.2□□□□□ -1.1
SMAD3-212ENST00000559937 CDH19Q9H159 772 aa8.2□□□□□ -1.1
SMAD3-212ENST00000559937 ZNF395Q9H8N7 513 aaPredicted RBP8.2□□□□□ -1.1
SMAD3-212ENST00000559937 ATP13A1Q9HD20 1204 aa8.2□□□□□ -1.1
SMAD3-212ENST00000559937 TREX1Q9NSU2 369 aa8.2□□□□□ -1.1
SMAD3-212ENST00000559937 TRMT13Q9NUP7 481 aaKnown RBP8.2□□□□□ -1.1
SMAD3-212ENST00000559937 RBM22Q9NW64 420 aaKnown RBP eCLIP8.2□□□□□ -1.1
SMAD3-212ENST00000559937 OXSMQ9NWU1 459 aa8.2□□□□□ -1.1
SMAD3-212ENST00000559937 ABI2Q9NYB9 513 aaPredicted RBP8.2□□□□□ -1.1
SMAD3-212ENST00000559937 DNAJB4Q9UDY4 337 aa8.2□□□□□ -1.1
SMAD3-212ENST00000559937 VTI1BQ9UEU0 232 aa8.2□□□□□ -1.1
SMAD3-212ENST00000559937 MARCOQ9UEW3 520 aaPredicted RBP8.2□□□□□ -1.1
SMAD3-212ENST00000559937 SFMBT1Q9UHJ3 866 aa8.2□□□□□ -1.1
SMAD3-212ENST00000559937 IPO11Q9UI26 975 aaKnown RBP8.2□□□□□ -1.1
SMAD3-212ENST00000559937 PLA2G4CQ9UP65 541 aa8.2□□□□□ -1.1
SMAD3-212ENST00000559937 RAP2CQ9Y3L5 183 aa8.2□□□□□ -1.1
SMAD3-212ENST00000559937 LRRC42Q9Y546 428 aa8.2□□□□□ -1.1
SMAD3-212ENST00000559937 CENPFP49454 3210 aa8.2□□□□□ -1.1
SMAD3-212ENST00000559937 HTTP42858 3142 aa8.2□□□□□ -1.1
SMAD3-212ENST00000559937 FAM95CA0A1B0GW59 222 aa8.19□□□□□ -1.1
SMAD3-212ENST00000559937 C2orf71A6NGG8 1288 aa8.19□□□□□ -1.1
SMAD3-212ENST00000559937 DRGXA6NNA5 263 aa8.19□□□□□ -1.1
SMAD3-212ENST00000559937 PRR5-ARHGAP8B1AHC4 643 aa8.19□□□□□ -1.1
SMAD3-212ENST00000559937 H7C4K7 107 aa8.19□□□□□ -1.1
SMAD3-212ENST00000559937 LIN7AO14910 233 aaPredicted RBP8.19□□□□□ -1.1
SMAD3-212ENST00000559937 MSI1O43347 362 aaKnown RBP8.19□□□□□ -1.1
SMAD3-212ENST00000559937 HOXA2O43364 376 aa8.19□□□□□ -1.1
SMAD3-212ENST00000559937 NPHS1O60500 1241 aa8.19□□□□□ -1.1
SMAD3-212ENST00000559937 B4GALT3O60512 393 aa8.19□□□□□ -1.1
SMAD3-212ENST00000559937 DIAPH2O60879 1101 aa8.19□□□□□ -1.1
SMAD3-212ENST00000559937 LUC7L3O95232 432 aaKnown RBP8.19□□□□□ -1.1
SMAD3-212ENST00000559937 PSMG1O95456 288 aa8.19□□□□□ -1.1
SMAD3-212ENST00000559937 PEX11BO96011 259 aa8.19□□□□□ -1.1
SMAD3-212ENST00000559937 IGLV3-27P01718 113 aa8.19□□□□□ -1.1
SMAD3-212ENST00000559937 HOXB8P17481 243 aaPredicted RBP8.19□□□□□ -1.1
SMAD3-212ENST00000559937 TPH1P17752 444 aa8.19□□□□□ -1.1
SMAD3-212ENST00000559937 ELF1P32519 619 aa8.19□□□□□ -1.1
SMAD3-212ENST00000559937 OR1G1P47890 313 aa8.19□□□□□ -1.1
SMAD3-212ENST00000559937 CD151P48509 253 aa8.19□□□□□ -1.1
SMAD3-212ENST00000559937 MAPKAPK2P49137 400 aa8.19□□□□□ -1.1
SMAD3-212ENST00000559937 CLCN5P51795 746 aa8.19□□□□□ -1.1
SMAD3-212ENST00000559937 ALDH18A1P54886 795 aaKnown RBP8.19□□□□□ -1.1
SMAD3-212ENST00000559937 WNT3AP56704 352 aa8.19□□□□□ -1.1
SMAD3-212ENST00000559937 RAB10P61026 200 aa8.19□□□□□ -1.1
SMAD3-212ENST00000559937 ARHGAP8P85298 464 aa8.19□□□□□ -1.1
SMAD3-212ENST00000559937 POU4F1Q01851 419 aa8.19□□□□□ -1.1
SMAD3-212ENST00000559937 SP3Q02447 781 aa8.19□□□□□ -1.1
SMAD3-212ENST00000559937 IL10RBQ08334 325 aa8.19□□□□□ -1.1
SMAD3-212ENST00000559937 PRKAA1Q13131 559 aa8.19□□□□□ -1.1
SMAD3-212ENST00000559937 THOC5Q13769 683 aaKnown RBP8.19□□□□□ -1.1
SMAD3-212ENST00000559937 RCN2Q14257 317 aa8.19□□□□□ -1.1
SMAD3-212ENST00000559937 USP10Q14694 798 aaKnown RBP8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms