RNA–Protein interactions for RNA: ENST00000558319.5

SPG11-210, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SPG11, Length 6,426 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-210ENST00000558319 SEPHS1P49903 392 aa14.12□□□□□ -0.15
SPG11-210ENST00000558319 RAP1GAP2Q684P5 730 aa14.12□□□□□ -0.15
SPG11-210ENST00000558319 HGH1Q9BTY7 390 aa14.12□□□□□ -0.15
SPG11-210ENST00000558319 C8orf4Q9NR00 106 aa14.12□□□□□ -0.15
SPG11-210ENST00000558319 GALNT8Q9NY28 637 aa14.12□□□□□ -0.15
SPG11-210ENST00000558319 A0A0U1RQJ8 604 aa14.12□□□□□ -0.15
SPG11-210ENST00000558319 WASP42768 502 aa14.12□□□□□ -0.15
SPG11-210ENST00000558319 ZNF470Q6ECI4 717 aa14.12□□□□□ -0.15
SPG11-210ENST00000558319 ALYREFQ86V81 257 aaKnown RBP14.12□□□□□ -0.15
SPG11-210ENST00000558319 ATXN10Q9UBB4 475 aa14.12□□□□□ -0.15
SPG11-210ENST00000558319 ANXA6P08133 673 aa14.12□□□□□ -0.15
SPG11-210ENST00000558319 CLUP10909 449 aa14.12□□□□□ -0.15
SPG11-210ENST00000558319 STAT5AP42229 794 aa14.12□□□□□ -0.15
SPG11-210ENST00000558319 PEG10Q86TG7 708 aaKnown RBP14.12□□□□□ -0.15
SPG11-210ENST00000558319 CAMK1DQ8IU85 385 aa14.12□□□□□ -0.15
SPG11-210ENST00000558319 AMER2Q8N7J2 671 aa14.12□□□□□ -0.15
SPG11-210ENST00000558319 ARRDC4Q8NCT1 418 aa14.12□□□□□ -0.15
SPG11-210ENST00000558319 SUN5Q8TC36 379 aa14.12□□□□□ -0.15
SPG11-210ENST00000558319 DNAJC1Q96KC8 554 aaKnown RBP14.12□□□□□ -0.15
SPG11-210ENST00000558319 BHLHE41Q9C0J9 482 aaPredicted RBP14.12□□□□□ -0.15
SPG11-210ENST00000558319 NEUROD4Q9HD90 331 aa14.12□□□□□ -0.15
SPG11-210ENST00000558319 ANKEF1Q9NU02 776 aa14.12□□□□□ -0.15
SPG11-210ENST00000558319 ALKBH4Q9NXW9 302 aa14.12□□□□□ -0.15
SPG11-210ENST00000558319 DNPEPQ9ULA0 475 aa14.12□□□□□ -0.15
SPG11-210ENST00000558319 PGM5Q15124 567 aa14.11□□□□□ -0.15
SPG11-210ENST00000558319 RFX4Q33E94 735 aa14.11□□□□□ -0.15
SPG11-210ENST00000558319 INO80DQ53TQ3 878 aaPredicted RBP14.11□□□□□ -0.15
SPG11-210ENST00000558319 MARC1Q5VT66 337 aa14.11□□□□□ -0.15
SPG11-210ENST00000558319 LPCAT4Q643R3 524 aa14.11□□□□□ -0.15
SPG11-210ENST00000558319 STYK1Q6J9G0 422 aa14.11□□□□□ -0.15
SPG11-210ENST00000558319 SPESP1Q6UW49 350 aa14.11□□□□□ -0.15
SPG11-210ENST00000558319 ADHFE1Q8IWW8 467 aa14.11□□□□□ -0.15
SPG11-210ENST00000558319 FAM9CQ8IZT9 166 aa14.11□□□□□ -0.15
SPG11-210ENST00000558319 PROX1Q92786 737 aa14.11□□□□□ -0.15
SPG11-210ENST00000558319 MAP3K14Q99558 947 aa14.11□□□□□ -0.15
SPG11-210ENST00000558319 ING3Q9NXR8 418 aa14.11□□□□□ -0.15
SPG11-210ENST00000558319 CCR3P51677 355 aa14.11□□□□□ -0.15
SPG11-210ENST00000558319 ZC3H7AQ8IWR0 971 aaKnown RBP14.11□□□□□ -0.15
SPG11-210ENST00000558319 ZFPM1Q8IX07 1006 aa14.11□□□□□ -0.15
SPG11-210ENST00000558319 CCDC185Q8N715 623 aa14.11□□□□□ -0.15
SPG11-210ENST00000558319 VPS35Q96QK1 796 aa14.11□□□□□ -0.15
SPG11-210ENST00000558319 FAM129BQ96TA1 746 aa14.11□□□□□ -0.15
SPG11-210ENST00000558319 S100A13Q99584 98 aa14.11□□□□□ -0.15
SPG11-210ENST00000558319 GSDMCQ9BYG8 508 aa14.11□□□□□ -0.15
SPG11-210ENST00000558319 PCDH9Q9HC56 1237 aa14.11□□□□□ -0.15
SPG11-210ENST00000558319 SHROOM2Q13796 1616 aa14.11□□□□□ -0.15
SPG11-210ENST00000558319 CD3EAPO15446 510 aaKnown RBP14.11□□□□□ -0.15
SPG11-210ENST00000558319 RAMP2O60895 175 aa14.11□□□□□ -0.15
SPG11-210ENST00000558319 HSF2Q03933 536 aa14.11□□□□□ -0.15
SPG11-210ENST00000558319 SFSWAPQ12872 951 aaKnown RBP14.11□□□□□ -0.15
SPG11-210ENST00000558319 C15orf59Q2T9L4 293 aaPredicted RBP14.11□□□□□ -0.15
SPG11-210ENST00000558319 LIN54Q6MZP7 749 aa14.11□□□□□ -0.15
SPG11-210ENST00000558319 ERICH5Q6P6B1 374 aa14.11□□□□□ -0.15
SPG11-210ENST00000558319 DHDDSQ86SQ9 333 aa14.11□□□□□ -0.15
SPG11-210ENST00000558319 SYTL5Q8TDW5 730 aaPredicted RBP14.11□□□□□ -0.15
SPG11-210ENST00000558319 CPNE1Q99829 537 aa14.11□□□□□ -0.15
SPG11-210ENST00000558319 PRDM15P57071 1507 aaPredicted RBP14.11□□□□□ -0.15
SPG11-210ENST00000558319 LRRC7Q96NW7 1537 aa14.11□□□□□ -0.15
SPG11-210ENST00000558319 HAT1O14929 419 aa14.11□□□□□ -0.15
SPG11-210ENST00000558319 FGRP09769 529 aa14.11□□□□□ -0.15
SPG11-210ENST00000558319 PTPN5P54829 565 aa14.11□□□□□ -0.15
SPG11-210ENST00000558319 NR1H2P55055 460 aa14.11□□□□□ -0.15
SPG11-210ENST00000558319 ZNF484Q5JVG2 852 aa14.11□□□□□ -0.15
SPG11-210ENST00000558319 EGFLAMQ63HQ2 1017 aa14.11□□□□□ -0.15
SPG11-210ENST00000558319 CNSTQ6PJW8 725 aa14.11□□□□□ -0.15
SPG11-210ENST00000558319 ADAM2Q99965 735 aa14.11□□□□□ -0.15
SPG11-210ENST00000558319 LRMDAQ9H2I8 198 aa14.11□□□□□ -0.15
SPG11-210ENST00000558319 PCDHB5Q9Y5E4 795 aa14.11□□□□□ -0.15
SPG11-210ENST00000558319 USP42Q9H9J4 1324 aaKnown RBP14.11□□□□□ -0.15
SPG11-210ENST00000558319 KPNA6O60684 536 aa14.11□□□□□ -0.15
SPG11-210ENST00000558319 PRG2P13727 222 aa14.11□□□□□ -0.15
SPG11-210ENST00000558319 YBX3P16989 372 aaKnown RBP eCLIP14.11□□□□□ -0.152e-6■□□□□ 10.6
SPG11-210ENST00000558319 TOP3AQ13472 1001 aaPredicted RBP14.11□□□□□ -0.15
SPG11-210ENST00000558319 FRG1Q14331 258 aaKnown RBP14.11□□□□□ -0.15
SPG11-210ENST00000558319 FBXL19Q6PCT2 694 aa14.11□□□□□ -0.15
SPG11-210ENST00000558319 SLCO6A1Q86UG4 719 aa14.11□□□□□ -0.15
SPG11-210ENST00000558319 PIGKQ92643 395 aa14.11□□□□□ -0.15
SPG11-210ENST00000558319 SPATC1LQ9H0A9 340 aa14.11□□□□□ -0.15
SPG11-210ENST00000558319 AASDHPPTQ9NRN7 309 aa14.11□□□□□ -0.15
SPG11-210ENST00000558319 ANGPT4Q9Y264 503 aa14.11□□□□□ -0.15
SPG11-210ENST00000558319 LOC110117498-PIK3R3F6TDL0 507 aa14.1□□□□□ -0.15
SPG11-210ENST00000558319 AKAP3O75969 853 aa14.1□□□□□ -0.15
SPG11-210ENST00000558319 MED22Q15528 200 aa14.1□□□□□ -0.15
SPG11-210ENST00000558319 PTPN20Q4JDL3 420 aa14.1□□□□□ -0.15
SPG11-210ENST00000558319 NEK5Q6P3R8 708 aa14.1□□□□□ -0.15
SPG11-210ENST00000558319 FAM131AQ6UXB0 335 aa14.1□□□□□ -0.15
SPG11-210ENST00000558319 OFCC1Q8IZS5 231 aa14.1□□□□□ -0.15
SPG11-210ENST00000558319 ATP6V1C2Q8NEY4 427 aa14.1□□□□□ -0.15
SPG11-210ENST00000558319 FAM84AQ96KN4 292 aa14.1□□□□□ -0.15
SPG11-210ENST00000558319 CLN6Q9NWW5 311 aa14.1□□□□□ -0.15
SPG11-210ENST00000558319 WTIPA6NIX2 430 aaPredicted RBP14.1□□□□□ -0.15
SPG11-210ENST00000558319 H0Y858 1186 aa14.1□□□□□ -0.15
SPG11-210ENST00000558319 CLDN5O00501 218 aa14.1□□□□□ -0.15
SPG11-210ENST00000558319 UNC5CO95185 931 aa14.1□□□□□ -0.15
SPG11-210ENST00000558319 LRATO95237 230 aa14.1□□□□□ -0.15
SPG11-210ENST00000558319 POLR2EP19388 210 aaKnown RBP14.1□□□□□ -0.15
SPG11-210ENST00000558319 BST2Q10589 180 aaKnown RBP14.1□□□□□ -0.15
SPG11-210ENST00000558319 ABRQ12979 859 aa14.1□□□□□ -0.15
SPG11-210ENST00000558319 GALNT3Q14435 633 aa14.1□□□□□ -0.15
SPG11-210ENST00000558319 TIMM50Q3ZCQ8 353 aa14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms