RNA–Protein interactions for RNA: ENST00000557740.5

SHMT2-235, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-235ENST00000557740 FZD3Q9NPG1 666 aa14.92□□□□□ -0.02
SHMT2-235ENST00000557740 ANO10Q9NW15 660 aa14.92□□□□□ -0.02
SHMT2-235ENST00000557740 ADAM22Q9P0K1 906 aa14.92□□□□□ -0.02
SHMT2-235ENST00000557740 HPCAL4Q9UM19 191 aa14.92□□□□□ -0.02
SHMT2-235ENST00000557740 GPSM3Q9Y4H4 160 aa14.92□□□□□ -0.02
SHMT2-235ENST00000557740 DSPP15924 2871 aaKnown RBP14.92□□□□□ -0.02
SHMT2-235ENST00000557740 TP53BP1Q12888 1972 aaPredicted RBP14.91□□□□□ -0.02
SHMT2-235ENST00000557740 ANKRD62A6NC57 917 aa14.91□□□□□ -0.02
SHMT2-235ENST00000557740 LGALS16A8MUM7 142 aa14.91□□□□□ -0.02
SHMT2-235ENST00000557740 GOLGA6L22H0YM25 854 aa14.91□□□□□ -0.02
SHMT2-235ENST00000557740 RNF103O00237 685 aa14.91□□□□□ -0.02
SHMT2-235ENST00000557740 RAMP2O60895 175 aa14.91□□□□□ -0.02
SHMT2-235ENST00000557740 ZNF821O75541 412 aaPredicted RBP14.91□□□□□ -0.02
SHMT2-235ENST00000557740 GJB6O95452 261 aa14.91□□□□□ -0.02
SHMT2-235ENST00000557740 PLEKP08567 350 aaPredicted RBP14.91□□□□□ -0.02
SHMT2-235ENST00000557740 ACVRL1P37023 503 aa14.91□□□□□ -0.02
SHMT2-235ENST00000557740 RPS21P63220 83 aaKnown RBP14.91□□□□□ -0.02
SHMT2-235ENST00000557740 CYP4F3Q08477 520 aa14.91□□□□□ -0.02
SHMT2-235ENST00000557740 MAPK8IP2Q13387 824 aaPredicted RBP14.91□□□□□ -0.02
SHMT2-235ENST00000557740 CAMK2BQ13554 666 aa14.91□□□□□ -0.02
SHMT2-235ENST00000557740 STX1AQ16623 288 aa14.91□□□□□ -0.02
SHMT2-235ENST00000557740 CLEC16AQ2KHT3 1053 aa14.91□□□□□ -0.02
SHMT2-235ENST00000557740 KIAA1161Q6NSJ0 714 aa14.91□□□□□ -0.02
SHMT2-235ENST00000557740 C19orf48Q6RUI8 117 aa14.91□□□□□ -0.02
SHMT2-235ENST00000557740 RBM43Q6ZSC3 357 aaKnown RBP14.91□□□□□ -0.02
SHMT2-235ENST00000557740 KANSL1Q7Z3B3 1105 aa14.91□□□□□ -0.02
SHMT2-235ENST00000557740 PTAR1Q7Z6K3 402 aaPredicted RBP14.91□□□□□ -0.02
SHMT2-235ENST00000557740 ZNF354CQ86Y25 554 aa14.91□□□□□ -0.02
SHMT2-235ENST00000557740 OR13H1Q8NG92 308 aa14.91□□□□□ -0.02
SHMT2-235ENST00000557740 FAM172AQ8WUF8 416 aa14.91□□□□□ -0.02
SHMT2-235ENST00000557740 ISG20Q96AZ6 181 aaKnown RBP14.91□□□□□ -0.02
SHMT2-235ENST00000557740 NXPE2Q96DL1 559 aa14.91□□□□□ -0.02
SHMT2-235ENST00000557740 OSBPL2Q9H1P3 480 aa14.91□□□□□ -0.02
SHMT2-235ENST00000557740 TMEM248Q9NWD8 314 aa14.91□□□□□ -0.02
SHMT2-235ENST00000557740 DNAI1Q9UI46 699 aa14.91□□□□□ -0.02
SHMT2-235ENST00000557740 ZFR2Q9UPR6 939 aaKnown RBP14.91□□□□□ -0.02
SHMT2-235ENST00000557740 PTPRBP23467 1997 aa14.91□□□□□ -0.02
SHMT2-235ENST00000557740 PLXNB3Q9ULL4 1909 aa14.9□□□□□ -0.02
SHMT2-235ENST00000557740 CXorf51AA0A1B0GTR3 108 aa14.9□□□□□ -0.02
SHMT2-235ENST00000557740 A6NNZ2 444 aa14.9□□□□□ -0.02
SHMT2-235ENST00000557740 FAM72CH0Y354 149 aa14.9□□□□□ -0.02
SHMT2-235ENST00000557740 LRIG2O94898 1065 aa14.9□□□□□ -0.02
SHMT2-235ENST00000557740 UNGP13051 313 aaPredicted RBP14.9□□□□□ -0.02
SHMT2-235ENST00000557740 CKMT2P17540 419 aa14.9□□□□□ -0.02
SHMT2-235ENST00000557740 CDK11BP21127 795 aaKnown RBP14.9□□□□□ -0.02
SHMT2-235ENST00000557740 GPD1P21695 349 aa14.9□□□□□ -0.02
SHMT2-235ENST00000557740 L1CAMP32004 1257 aa14.9□□□□□ -0.02
SHMT2-235ENST00000557740 HDAC4P56524 1084 aa14.9□□□□□ -0.02
SHMT2-235ENST00000557740 CLDN6P56747 220 aa14.9□□□□□ -0.02
SHMT2-235ENST00000557740 GSCP56915 257 aaPredicted RBP14.9□□□□□ -0.02
SHMT2-235ENST00000557740 CLDN2P57739 230 aa14.9□□□□□ -0.02
SHMT2-235ENST00000557740 UBXN1Q04323 297 aa14.9□□□□□ -0.02
SHMT2-235ENST00000557740 ILKQ13418 452 aa14.9□□□□□ -0.02
SHMT2-235ENST00000557740 POLD3Q15054 466 aaPredicted RBP14.9□□□□□ -0.02
SHMT2-235ENST00000557740 TMEM259Q4ZIN3 620 aa14.9□□□□□ -0.02
SHMT2-235ENST00000557740 HES3Q5TGS1 186 aa14.9□□□□□ -0.02
SHMT2-235ENST00000557740 FAM72AQ5TYM5 149 aa14.9□□□□□ -0.02
SHMT2-235ENST00000557740 FAM72DQ6L9T8 149 aa14.9□□□□□ -0.02
SHMT2-235ENST00000557740 DNAJC24Q6P3W2 148 aa14.9□□□□□ -0.02
SHMT2-235ENST00000557740 GCNT7Q6ZNI0 430 aa14.9□□□□□ -0.02
SHMT2-235ENST00000557740 PARS2Q7L3T8 475 aaKnown RBP14.9□□□□□ -0.02
SHMT2-235ENST00000557740 NLRP14Q86W24 1093 aa14.9□□□□□ -0.02
SHMT2-235ENST00000557740 FAM72BQ86X60 149 aa14.9□□□□□ -0.02
SHMT2-235ENST00000557740 CCDC185Q8N715 623 aa14.9□□□□□ -0.02
SHMT2-235ENST00000557740 C3orf20Q8ND61 904 aa14.9□□□□□ -0.02
SHMT2-235ENST00000557740 OR6K2Q8NGY2 324 aa14.9□□□□□ -0.02
SHMT2-235ENST00000557740 FAM174AQ8TBP5 190 aa14.9□□□□□ -0.02
SHMT2-235ENST00000557740 TSC1Q92574 1164 aa14.9□□□□□ -0.02
SHMT2-235ENST00000557740 ARHGEF2Q92974 986 aaKnown RBP14.9□□□□□ -0.02
SHMT2-235ENST00000557740 NTAN1Q96AB6 310 aa14.9□□□□□ -0.02
SHMT2-235ENST00000557740 FEM1CQ96JP0 617 aa14.9□□□□□ -0.02
SHMT2-235ENST00000557740 PCDHB18PQ96TA0 734 aa14.9□□□□□ -0.02
SHMT2-235ENST00000557740 MAGEH1Q9H213 219 aa14.9□□□□□ -0.02
SHMT2-235ENST00000557740 KLHL11Q9NVR0 708 aa14.9□□□□□ -0.02
SHMT2-235ENST00000557740 HECAQ9UBI9 543 aaPredicted RBP14.9□□□□□ -0.02
SHMT2-235ENST00000557740 LIMA1Q9UHB6 759 aaKnown RBP14.9□□□□□ -0.02
SHMT2-235ENST00000557740 ACTL7AQ9Y615 435 aa14.9□□□□□ -0.02
SHMT2-235ENST00000557740 NEMP1O14524 444 aa14.89□□□□□ -0.03
SHMT2-235ENST00000557740 FFAR2O15552 330 aa14.89□□□□□ -0.03
SHMT2-235ENST00000557740 SIGLEC6O43699 453 aa14.89□□□□□ -0.03
SHMT2-235ENST00000557740 AP1G1O43747 822 aa14.89□□□□□ -0.03
SHMT2-235ENST00000557740 GSRP00390 522 aa14.89□□□□□ -0.03
SHMT2-235ENST00000557740 DESP17661 470 aa14.89□□□□□ -0.03
SHMT2-235ENST00000557740 RFC1P35251 1148 aaPredicted RBP14.89□□□□□ -0.03
SHMT2-235ENST00000557740 SNRPD1P62314 119 aaKnown RBP14.89□□□□□ -0.03
SHMT2-235ENST00000557740 DAB2P98082 770 aa14.89□□□□□ -0.03
SHMT2-235ENST00000557740 PTP4A2Q12974 167 aa14.89□□□□□ -0.03
SHMT2-235ENST00000557740 SGCGQ13326 291 aa14.89□□□□□ -0.03
SHMT2-235ENST00000557740 ZNF211Q13398 564 aaPredicted RBP14.89□□□□□ -0.03
SHMT2-235ENST00000557740 PROX2Q3B8N5 592 aa14.89□□□□□ -0.03
SHMT2-235ENST00000557740 EFHC2Q5JST6 749 aa14.89□□□□□ -0.03
SHMT2-235ENST00000557740 ABI3BPQ7Z7G0 1075 aa14.89□□□□□ -0.03
SHMT2-235ENST00000557740 ZSCAN30Q86W11 494 aa14.89□□□□□ -0.03
SHMT2-235ENST00000557740 PHF13Q86YI8 300 aaPredicted RBP14.89□□□□□ -0.03
SHMT2-235ENST00000557740 PLPP6Q8IY26 295 aa14.89□□□□□ -0.03
SHMT2-235ENST00000557740 CENPIQ92674 756 aaPredicted RBP14.89□□□□□ -0.03
SHMT2-235ENST00000557740 NDFIP2Q9NV92 336 aa14.89□□□□□ -0.03
SHMT2-235ENST00000557740 NEU3Q9UQ49 428 aa14.89□□□□□ -0.03
SHMT2-235ENST00000557740 FADS3Q9Y5Q0 445 aa14.89□□□□□ -0.03
SHMT2-235ENST00000557740 ATRXP46100 2492 aa14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms