RNA–Protein interactions for RNA: ENST00000555585.5

HNRNPC-220, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 2

Gene HNRNPC, Length 682 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-220ENST00000555585 CACNG3O60359 315 aa9.81□□□□□ -0.84
HNRNPC-220ENST00000555585 PMPCBO75439 489 aa9.81□□□□□ -0.84
HNRNPC-220ENST00000555585 BANF1O75531 89 aa9.81□□□□□ -0.84
HNRNPC-220ENST00000555585 ZMPSTE24O75844 475 aa9.81□□□□□ -0.84
HNRNPC-220ENST00000555585 AP2A1O95782 977 aa9.81□□□□□ -0.84
HNRNPC-220ENST00000555585 CYP17A1P05093 508 aa9.81□□□□□ -0.84
HNRNPC-220ENST00000555585 PABPC1P11940 636 aaKnown RBP9.81□□□□□ -0.84
HNRNPC-220ENST00000555585 LAMP2P13473 410 aa9.81□□□□□ -0.84
HNRNPC-220ENST00000555585 CD86P42081 329 aa9.81□□□□□ -0.84
HNRNPC-220ENST00000555585 GRIA1P42261 906 aa9.81□□□□□ -0.84
HNRNPC-220ENST00000555585 PLK1P53350 603 aa9.81□□□□□ -0.84
HNRNPC-220ENST00000555585 GEMIN4P57678 1058 aaKnown RBP9.81□□□□□ -0.84
HNRNPC-220ENST00000555585 ARF5P84085 180 aa9.81□□□□□ -0.84
HNRNPC-220ENST00000555585 DSC2Q02487 901 aa9.81□□□□□ -0.84
HNRNPC-220ENST00000555585 NR1H3Q13133 447 aa9.81□□□□□ -0.84
HNRNPC-220ENST00000555585 MTM1Q13496 603 aa9.81□□□□□ -0.84
HNRNPC-220ENST00000555585 GRM2Q14416 872 aa9.81□□□□□ -0.84
HNRNPC-220ENST00000555585 CYTH1Q15438 398 aa9.81□□□□□ -0.84
HNRNPC-220ENST00000555585 SKIV2LQ15477 1246 aaKnown RBP9.81□□□□□ -0.84
HNRNPC-220ENST00000555585 KYNUQ16719 465 aa9.81□□□□□ -0.84
HNRNPC-220ENST00000555585 PLEKHG6Q3KR16 790 aa9.81□□□□□ -0.84
HNRNPC-220ENST00000555585 DNAJC21Q5F1R6 531 aaKnown RBP9.81□□□□□ -0.84
HNRNPC-220ENST00000555585 PITRM1Q5JRX3 1037 aa9.81□□□□□ -0.84
HNRNPC-220ENST00000555585 PRPF38BQ5VTL8 546 aaKnown RBP9.81□□□□□ -0.84
HNRNPC-220ENST00000555585 DENND2CQ68D51 928 aa9.81□□□□□ -0.84
HNRNPC-220ENST00000555585 RNF43Q68DV7 783 aa9.81□□□□□ -0.84
HNRNPC-220ENST00000555585 RETSATQ6NUM9 610 aa9.81□□□□□ -0.84
HNRNPC-220ENST00000555585 TRMT10CQ7L0Y3 403 aaKnown RBP9.81□□□□□ -0.84
HNRNPC-220ENST00000555585 MFSD6LQ8IWD5 586 aa9.81□□□□□ -0.84
HNRNPC-220ENST00000555585 PGBD5Q8N414 524 aa9.81□□□□□ -0.84
HNRNPC-220ENST00000555585 IPMKQ8NFU5 416 aa9.81□□□□□ -0.84
HNRNPC-220ENST00000555585 UHMK1Q8TAS1 419 aaKnown RBP9.81□□□□□ -0.84
HNRNPC-220ENST00000555585 PYROXD1Q8WU10 500 aa9.81□□□□□ -0.84
HNRNPC-220ENST00000555585 MYLIPQ8WY64 445 aa9.81□□□□□ -0.84
HNRNPC-220ENST00000555585 ATP2A3Q93084 1043 aa9.81□□□□□ -0.84
HNRNPC-220ENST00000555585 RNF166Q96A37 237 aaPredicted RBP9.81□□□□□ -0.84
HNRNPC-220ENST00000555585 ELSPBP1Q96BH3 223 aa9.81□□□□□ -0.84
HNRNPC-220ENST00000555585 ZBTB9Q96C00 473 aa9.81□□□□□ -0.84
HNRNPC-220ENST00000555585 ASIC4Q96FT7 647 aa9.81□□□□□ -0.84
HNRNPC-220ENST00000555585 OXNAD1Q96HP4 312 aaPredicted RBP9.81□□□□□ -0.84
HNRNPC-220ENST00000555585 ZNF419Q96HQ0 510 aaPredicted RBP9.81□□□□□ -0.84
HNRNPC-220ENST00000555585 C9orf72Q96LT7 481 aa9.81□□□□□ -0.84
HNRNPC-220ENST00000555585 SERPINB12Q96P63 405 aa9.81□□□□□ -0.84
HNRNPC-220ENST00000555585 RUFY1Q96T51 708 aa9.81□□□□□ -0.84
HNRNPC-220ENST00000555585 GORASP1Q9BQQ3 440 aa9.81□□□□□ -0.84
HNRNPC-220ENST00000555585 FICDQ9BVA6 458 aa9.81□□□□□ -0.84
HNRNPC-220ENST00000555585 SLC2A11Q9BYW1 496 aa9.81□□□□□ -0.84
HNRNPC-220ENST00000555585 PLA2G2FQ9BZM2 168 aa9.81□□□□□ -0.84
HNRNPC-220ENST00000555585 POLR1EQ9GZS1 481 aaKnown RBP9.81□□□□□ -0.84
HNRNPC-220ENST00000555585 SEMA4AQ9H3S1 761 aa9.81□□□□□ -0.84
HNRNPC-220ENST00000555585 EBF3Q9H4W6 596 aa9.81□□□□□ -0.84
HNRNPC-220ENST00000555585 LRRC40Q9H9A6 602 aa9.81□□□□□ -0.84
HNRNPC-220ENST00000555585 XAB2Q9HCS7 855 aaKnown RBP9.81□□□□□ -0.84
HNRNPC-220ENST00000555585 NINJ2Q9NZG7 142 aa9.81□□□□□ -0.84
HNRNPC-220ENST00000555585 SLC25A13Q9UJS0 675 aa9.81□□□□□ -0.84
HNRNPC-220ENST00000555585 GGA2Q9UJY4 613 aa9.81□□□□□ -0.84
HNRNPC-220ENST00000555585 PLAAQ9Y263 795 aa9.81□□□□□ -0.84
HNRNPC-220ENST00000555585 USP15Q9Y4E8 981 aaPredicted RBP9.81□□□□□ -0.84
HNRNPC-220ENST00000555585 MIA3Q5JRA6 1907 aa9.8□□□□□ -0.84
HNRNPC-220ENST00000555585 TTC24A2A3L6 582 aaPredicted RBP9.8□□□□□ -0.84
HNRNPC-220ENST00000555585 E7ESA3 106 aa9.8□□□□□ -0.84
HNRNPC-220ENST00000555585 MAP2K7O14733 419 aa9.8□□□□□ -0.84
HNRNPC-220ENST00000555585 ALOX15BO15296 676 aa9.8□□□□□ -0.84
HNRNPC-220ENST00000555585 RIPK2O43353 540 aa9.8□□□□□ -0.84
HNRNPC-220ENST00000555585 USP12O75317 370 aa9.8□□□□□ -0.84
HNRNPC-220ENST00000555585 AVILO75366 819 aa9.8□□□□□ -0.84
HNRNPC-220ENST00000555585 SASH3O75995 380 aa9.8□□□□□ -0.84
HNRNPC-220ENST00000555585 TMCC1O94876 653 aa9.8□□□□□ -0.84
HNRNPC-220ENST00000555585 SUN1O94901 812 aa9.8□□□□□ -0.84
HNRNPC-220ENST00000555585 ACSL3O95573 720 aa9.8□□□□□ -0.84
HNRNPC-220ENST00000555585 MT-CYBP00156 380 aaPredicted RBP9.8□□□□□ -0.84
HNRNPC-220ENST00000555585 CPP00450 1065 aa9.8□□□□□ -0.84
HNRNPC-220ENST00000555585 SP100P23497 879 aaPredicted RBP9.8□□□□□ -0.84
HNRNPC-220ENST00000555585 HLA-FP30511 346 aa9.8□□□□□ -0.84
HNRNPC-220ENST00000555585 ELK3P41970 407 aa9.8□□□□□ -0.84
HNRNPC-220ENST00000555585 DGKGP49619 791 aa9.8□□□□□ -0.84
HNRNPC-220ENST00000555585 SESN2P58004 480 aaPredicted RBP9.8□□□□□ -0.84
HNRNPC-220ENST00000555585 RHOAP61586 193 aa9.8□□□□□ -0.84
HNRNPC-220ENST00000555585 TNK2Q07912 1038 aa9.8□□□□□ -0.84
HNRNPC-220ENST00000555585 NIPAL4Q0D2K0 466 aa9.8□□□□□ -0.84
HNRNPC-220ENST00000555585 MPP3Q13368 585 aa9.8□□□□□ -0.84
HNRNPC-220ENST00000555585 OLIG2Q13516 323 aa9.8□□□□□ -0.84
HNRNPC-220ENST00000555585 DMC1Q14565 340 aa9.8□□□□□ -0.84
HNRNPC-220ENST00000555585 COL19A1Q14993 1142 aa9.8□□□□□ -0.84
HNRNPC-220ENST00000555585 FASTKD3Q14CZ7 662 aaKnown RBP9.8□□□□□ -0.84
HNRNPC-220ENST00000555585 UAP1Q16222 522 aaPredicted RBP9.8□□□□□ -0.84
HNRNPC-220ENST00000555585 PCSK7Q16549 785 aa9.8□□□□□ -0.84
HNRNPC-220ENST00000555585 MSS51Q4VC12 460 aa9.8□□□□□ -0.84
HNRNPC-220ENST00000555585 INO80DQ53TQ3 878 aaPredicted RBP9.8□□□□□ -0.84
HNRNPC-220ENST00000555585 SPDYCQ5MJ68 293 aa9.8□□□□□ -0.84
HNRNPC-220ENST00000555585 ALS2CLQ60I27 953 aa9.8□□□□□ -0.84
HNRNPC-220ENST00000555585 KCTD11Q693B1 232 aa9.8□□□□□ -0.84
HNRNPC-220ENST00000555585 NAPEPLDQ6IQ20 393 aa9.8□□□□□ -0.84
HNRNPC-220ENST00000555585 LRRC8BQ6P9F7 803 aa9.8□□□□□ -0.84
HNRNPC-220ENST00000555585 PARM1Q6UWI2 310 aa9.8□□□□□ -0.84
HNRNPC-220ENST00000555585 CAPN12Q6ZSI9 719 aa9.8□□□□□ -0.84
HNRNPC-220ENST00000555585 KDELC2Q7Z4H8 507 aa9.8□□□□□ -0.84
HNRNPC-220ENST00000555585 LINC00523Q86TU6 105 aa9.8□□□□□ -0.84
HNRNPC-220ENST00000555585 CAND1Q86VP6 1230 aaKnown RBP9.8□□□□□ -0.84
HNRNPC-220ENST00000555585 RNF135Q8IUD6 432 aa9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 85.5 ms