RNA–Protein interactions for RNA: ENST00000555506.1

KTN1-222, Transcript of kinectin 1, human

TSL 1 (best)

Gene KTN1, Length 1,464 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KTN1-222	ENST00000555506	DDAH2	O95865	285 aa		4.66	□□□□□ -1.66
KTN1-222	ENST00000555506	NHLRC4	P0CG21	123 aa	Predicted RBP	4.66	□□□□□ -1.66
KTN1-222	ENST00000555506	CHRNA5	P30532	468 aa		4.66	□□□□□ -1.66
KTN1-222	ENST00000555506	RAD52	P43351	418 aa		4.66	□□□□□ -1.66
KTN1-222	ENST00000555506	CPA2	P48052	419 aa		4.66	□□□□□ -1.66
KTN1-222	ENST00000555506	ELL	P55199	621 aa	Predicted RBP	4.66	□□□□□ -1.66
KTN1-222	ENST00000555506	CYP4A11	Q02928	519 aa		4.66	□□□□□ -1.66
KTN1-222	ENST00000555506	CUL4A	Q13619	759 aa		4.66	□□□□□ -1.66
KTN1-222	ENST00000555506	PROSER3	Q2NL68	480 aa		4.66	□□□□□ -1.66
KTN1-222	ENST00000555506	EDRF1	Q3B7T1	1238 aa		4.66	□□□□□ -1.66
KTN1-222	ENST00000555506	PRAMEF17	Q5VTA0	474 aa		4.66	□□□□□ -1.66
KTN1-222	ENST00000555506	TMEM268	Q5VZI3	342 aa		4.66	□□□□□ -1.66
KTN1-222	ENST00000555506	IKBIP	Q70UQ0	350 aa		4.66	□□□□□ -1.66
KTN1-222	ENST00000555506	TADA2B	Q86TJ2	420 aa		4.66	□□□□□ -1.66
KTN1-222	ENST00000555506	ARL14EP	Q8N8R7	260 aa	Predicted RBP	4.66	□□□□□ -1.66
KTN1-222	ENST00000555506	NSUN4	Q96CB9	384 aa	Known RBP	4.66	□□□□□ -1.66
KTN1-222	ENST00000555506	PERP	Q96FX8	193 aa		4.66	□□□□□ -1.66
KTN1-222	ENST00000555506	TEFM	Q96QE5	360 aa	Known RBP	4.66	□□□□□ -1.66
KTN1-222	ENST00000555506	SERINC2	Q96SA4	455 aa		4.66	□□□□□ -1.66
KTN1-222	ENST00000555506	SYNC	Q9H7C4	482 aa		4.66	□□□□□ -1.66
KTN1-222	ENST00000555506	SMYD2	Q9NRG4	433 aa		4.66	□□□□□ -1.66
KTN1-222	ENST00000555506	C20orf141	Q9NUB4	165 aa		4.66	□□□□□ -1.66
KTN1-222	ENST00000555506	BABAM1	Q9NWV8	329 aa		4.66	□□□□□ -1.66
KTN1-222	ENST00000555506	HCFC1R1	Q9NWW0	138 aa		4.66	□□□□□ -1.66
KTN1-222	ENST00000555506	GRHL1	Q9NZI5	618 aa		4.66	□□□□□ -1.66
KTN1-222	ENST00000555506	KIAA1456	Q9P272	454 aa		4.66	□□□□□ -1.66
KTN1-222	ENST00000555506	ARPP21	Q9UBL0	812 aa	Predicted RBP	4.66	□□□□□ -1.66
KTN1-222	ENST00000555506	LIMA1	Q9UHB6	759 aa	Known RBP	4.66	□□□□□ -1.66
KTN1-222	ENST00000555506	IPO11	Q9UI26	975 aa	Known RBP	4.66	□□□□□ -1.66
KTN1-222	ENST00000555506	TTLL3	Q9Y4R7	772 aa		4.66	□□□□□ -1.66
KTN1-222	ENST00000555506	KCNE2	Q9Y6J6	123 aa		4.66	□□□□□ -1.66
KTN1-222	ENST00000555506	KAT6A	Q92794	2004 aa		4.66	□□□□□ -1.66
KTN1-222	ENST00000555506	ARHGAP10	A1A4S6	786 aa		4.65	□□□□□ -1.66
KTN1-222	ENST00000555506	TARSL2	A2RTX5	802 aa	Known RBP	4.65	□□□□□ -1.66
KTN1-222	ENST00000555506	LIPT2	A6NK58	231 aa		4.65	□□□□□ -1.66
KTN1-222	ENST00000555506	AHCYL1	O43865	530 aa		4.65	□□□□□ -1.66
KTN1-222	ENST00000555506	NFATC1	O95644	943 aa		4.65	□□□□□ -1.66
KTN1-222	ENST00000555506	TFEB	P19484	476 aa		4.65	□□□□□ -1.66
KTN1-222	ENST00000555506	NFKBIA	P25963	317 aa		4.65	□□□□□ -1.66
KTN1-222	ENST00000555506	YPEL5	P62699	121 aa		4.65	□□□□□ -1.66
KTN1-222	ENST00000555506	TMEM115	Q12893	351 aa	Predicted RBP	4.65	□□□□□ -1.66
KTN1-222	ENST00000555506	CDC73	Q6P1J9	531 aa		4.65	□□□□□ -1.66
KTN1-222	ENST00000555506	LRIG3	Q6UXM1	1119 aa		4.65	□□□□□ -1.66
KTN1-222	ENST00000555506	ZNF813	Q6ZN06	617 aa		4.65	□□□□□ -1.66
KTN1-222	ENST00000555506	SLC46A3	Q7Z3Q1	461 aa		4.65	□□□□□ -1.66
KTN1-222	ENST00000555506	FAM160B2	Q86V87	743 aa		4.65	□□□□□ -1.66
KTN1-222	ENST00000555506	TTC39C	Q8N584	583 aa		4.65	□□□□□ -1.66
KTN1-222	ENST00000555506	CADM4	Q8NFZ8	388 aa		4.65	□□□□□ -1.66
KTN1-222	ENST00000555506	HDAC7	Q8WUI4	952 aa		4.65	□□□□□ -1.66
KTN1-222	ENST00000555506	FAR1	Q8WVX9	515 aa		4.65	□□□□□ -1.66
KTN1-222	ENST00000555506	EFHD1	Q9BUP0	239 aa		4.65	□□□□□ -1.66
KTN1-222	ENST00000555506	HEMGN	Q9BXL5	484 aa		4.65	□□□□□ -1.66
KTN1-222	ENST00000555506	CXorf56	Q9H5V9	222 aa		4.65	□□□□□ -1.66
KTN1-222	ENST00000555506	PRKRIP1	Q9H875	184 aa	Predicted RBP	4.65	□□□□□ -1.66
KTN1-222	ENST00000555506	SNTG1	Q9NSN8	517 aa		4.65	□□□□□ -1.66
KTN1-222	ENST00000555506	SLCO3A1	Q9UIG8	710 aa		4.65	□□□□□ -1.66
KTN1-222	ENST00000555506	CYP2D7	A0A087X1C5	515 aa		4.64	□□□□□ -1.67
KTN1-222	ENST00000555506	MASP2	O00187	686 aa		4.64	□□□□□ -1.67
KTN1-222	ENST00000555506	IL1A	P01583	271 aa		4.64	□□□□□ -1.67
KTN1-222	ENST00000555506	ZNF8	P17098	575 aa	Predicted RBP	4.64	□□□□□ -1.67
KTN1-222	ENST00000555506	KRTAP5-9	P26371	169 aa		4.64	□□□□□ -1.67
KTN1-222	ENST00000555506	POU1F1	P28069	291 aa		4.64	□□□□□ -1.67
KTN1-222	ENST00000555506	TM4SF1	P30408	202 aa		4.64	□□□□□ -1.67
KTN1-222	ENST00000555506	EFNA5	P52803	228 aa		4.64	□□□□□ -1.67
KTN1-222	ENST00000555506	SLC12A2	P55011	1212 aa		4.64	□□□□□ -1.67
KTN1-222	ENST00000555506	TUBA4A	P68366	448 aa		4.64	□□□□□ -1.67
KTN1-222	ENST00000555506	OLR1	P78380	273 aa		4.64	□□□□□ -1.67
KTN1-222	ENST00000555506	CREB5	Q02930	508 aa		4.64	□□□□□ -1.67
KTN1-222	ENST00000555506	MED22	Q15528	200 aa		4.64	□□□□□ -1.67
KTN1-222	ENST00000555506	GSTA3	Q16772	222 aa		4.64	□□□□□ -1.67
KTN1-222	ENST00000555506	CCDC142	Q17RM4	750 aa		4.64	□□□□□ -1.67
KTN1-222	ENST00000555506	SERTAD4-AS1	Q5TG53	156 aa		4.64	□□□□□ -1.67
KTN1-222	ENST00000555506	ATG9B	Q674R7	924 aa		4.64	□□□□□ -1.67
KTN1-222	ENST00000555506	SYCE2	Q6PIF2	218 aa		4.64	□□□□□ -1.67
KTN1-222	ENST00000555506	NCEH1	Q6PIU2	408 aa		4.64	□□□□□ -1.67
KTN1-222	ENST00000555506	KRBA2	Q6ZNG9	492 aa		4.64	□□□□□ -1.67
KTN1-222	ENST00000555506	MOB3C	Q70IA8	216 aa		4.64	□□□□□ -1.67
KTN1-222	ENST00000555506	CYB5R4	Q7L1T6	521 aa		4.64	□□□□□ -1.67
KTN1-222	ENST00000555506	GALNT5	Q7Z7M9	940 aa		4.64	□□□□□ -1.67
KTN1-222	ENST00000555506	OR8H2	Q8N162	312 aa		4.64	□□□□□ -1.67
KTN1-222	ENST00000555506	BCAS4	Q8TDM0	211 aa		4.64	□□□□□ -1.67
KTN1-222	ENST00000555506	KAT2A	Q92830	837 aa		4.64	□□□□□ -1.67
KTN1-222	ENST00000555506	INTS12	Q96CB8	462 aa	Known RBP	4.64	□□□□□ -1.67
KTN1-222	ENST00000555506	EHD2	Q9NZN4	543 aa		4.64	□□□□□ -1.67
KTN1-222	ENST00000555506	CDH22	Q9UJ99	828 aa		4.64	□□□□□ -1.67
KTN1-222	ENST00000555506	PCDHGB5	Q9Y5G0	923 aa		4.64	□□□□□ -1.67
KTN1-222	ENST00000555506	MST1R	Q04912	1400 aa		4.64	□□□□□ -1.67
KTN1-222	ENST00000555506	C11orf97	A0A1B0GVM6	126 aa	Predicted RBP	4.63	□□□□□ -1.67
KTN1-222	ENST00000555506	MBD3L2B	A0A1B0GVZ6	204 aa	Predicted RBP	4.63	□□□□□ -1.67
KTN1-222	ENST00000555506	TTC36	A6NLP5	189 aa		4.63	□□□□□ -1.67
KTN1-222	ENST00000555506	PTGES3L	E9PB15	166 aa		4.63	□□□□□ -1.67
KTN1-222	ENST00000555506	CD63	P08962	238 aa		4.63	□□□□□ -1.67
KTN1-222	ENST00000555506	CDH2	P19022	906 aa	Predicted RBP	4.63	□□□□□ -1.67
KTN1-222	ENST00000555506	KLRC2	P26717	231 aa		4.63	□□□□□ -1.67
KTN1-222	ENST00000555506	PBX3	P40426	434 aa		4.63	□□□□□ -1.67
KTN1-222	ENST00000555506	C21orf58	P58505	322 aa		4.63	□□□□□ -1.67
KTN1-222	ENST00000555506	YWHAZ	P63104	245 aa	Known RBP	4.63	□□□□□ -1.67
KTN1-222	ENST00000555506	HSF1	Q00613	529 aa		4.63	□□□□□ -1.67
KTN1-222	ENST00000555506	MC1R	Q01726	317 aa		4.63	□□□□□ -1.67
KTN1-222	ENST00000555506	ACVR2B	Q13705	512 aa		4.63	□□□□□ -1.67

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