RNA–Protein interactions for RNA: ENST00000554656.5

SHMT2-215, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 817 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-215ENST00000554656 ARHGEF38Q9NXL2 777 aa10.83□□□□□ -0.68
SHMT2-215ENST00000554656 VPS51Q9UID3 782 aa10.83□□□□□ -0.68
SHMT2-215ENST00000554656 SLC25A13Q9UJS0 675 aa10.83□□□□□ -0.68
SHMT2-215ENST00000554656 VPS28Q9UK41 221 aa10.83□□□□□ -0.68
SHMT2-215ENST00000554656 HS3ST2Q9Y278 367 aa10.83□□□□□ -0.68
SHMT2-215ENST00000554656 PCDHGA1Q9Y5H4 931 aa10.83□□□□□ -0.68
SHMT2-215ENST00000554656 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP10.82□□□□□ -0.68
SHMT2-215ENST00000554656 ALOX15BO15296 676 aa10.82□□□□□ -0.68
SHMT2-215ENST00000554656 YKT6O15498 198 aa10.82□□□□□ -0.68
SHMT2-215ENST00000554656 AKR1B10O60218 316 aa10.82□□□□□ -0.68
SHMT2-215ENST00000554656 BNIP3LO60238 219 aa10.82□□□□□ -0.68
SHMT2-215ENST00000554656 CLDN11O75508 207 aa10.82□□□□□ -0.68
SHMT2-215ENST00000554656 RFPL3O75679 317 aa10.82□□□□□ -0.68
SHMT2-215ENST00000554656 PRLRP16471 622 aa10.82□□□□□ -0.68
SHMT2-215ENST00000554656 GLDCP23378 1020 aa10.82□□□□□ -0.68
SHMT2-215ENST00000554656 RRM1P23921 792 aa10.82□□□□□ -0.68
SHMT2-215ENST00000554656 CDH5P33151 784 aaPredicted RBP10.82□□□□□ -0.68
SHMT2-215ENST00000554656 EIF4A3P38919 411 aaKnown RBP10.82□□□□□ -0.68
SHMT2-215ENST00000554656 CDH4P55283 916 aa10.82□□□□□ -0.68
SHMT2-215ENST00000554656 OXCT1P55809 520 aa10.82□□□□□ -0.68
SHMT2-215ENST00000554656 PTK2Q05397 1052 aa10.82□□□□□ -0.68
SHMT2-215ENST00000554656 ZNF177Q13360 481 aaPredicted RBP10.82□□□□□ -0.68
SHMT2-215ENST00000554656 DRAP1Q14919 205 aaPredicted RBP10.82□□□□□ -0.68
SHMT2-215ENST00000554656 SPA17Q15506 151 aa10.82□□□□□ -0.68
SHMT2-215ENST00000554656 C2CD6Q53TS8 623 aa10.82□□□□□ -0.68
SHMT2-215ENST00000554656 TDRD12Q587J7 1177 aaKnown RBP10.82□□□□□ -0.68
SHMT2-215ENST00000554656 HES3Q5TGS1 186 aa10.82□□□□□ -0.68
SHMT2-215ENST00000554656 FBXL19Q6PCT2 694 aa10.82□□□□□ -0.68
SHMT2-215ENST00000554656 LINGO4Q6UY18 593 aa10.82□□□□□ -0.68
SHMT2-215ENST00000554656 DSG4Q86SJ6 1040 aa10.82□□□□□ -0.68
SHMT2-215ENST00000554656 TMPRSS12Q86WS5 348 aa10.82□□□□□ -0.68
SHMT2-215ENST00000554656 C17orf53Q8N3J3 647 aaPredicted RBP10.82□□□□□ -0.68
SHMT2-215ENST00000554656 PDCD7Q8N8D1 485 aaKnown RBP10.82□□□□□ -0.68
SHMT2-215ENST00000554656 TMEM145Q8NBT3 493 aa10.82□□□□□ -0.68
SHMT2-215ENST00000554656 CHST14Q8NCH0 376 aa10.82□□□□□ -0.68
SHMT2-215ENST00000554656 OR2A12Q8NGT7 310 aa10.82□□□□□ -0.68
SHMT2-215ENST00000554656 KLK6Q92876 244 aa10.82□□□□□ -0.68
SHMT2-215ENST00000554656 SKA1Q96BD8 255 aa10.82□□□□□ -0.68
SHMT2-215ENST00000554656 PGAP3Q96FM1 320 aaPredicted RBP10.82□□□□□ -0.68
SHMT2-215ENST00000554656 TBCBQ99426 244 aa10.82□□□□□ -0.68
SHMT2-215ENST00000554656 MYOCQ99972 504 aa10.82□□□□□ -0.68
SHMT2-215ENST00000554656 TKTL2Q9H0I9 626 aa10.82□□□□□ -0.68
SHMT2-215ENST00000554656 DEF6Q9H4E7 631 aa10.82□□□□□ -0.68
SHMT2-215ENST00000554656 MYO1AQ9UBC5 1043 aa10.82□□□□□ -0.68
SHMT2-215ENST00000554656 ZNF212Q9UDV6 495 aa10.82□□□□□ -0.68
SHMT2-215ENST00000554656 TPX2Q9ULW0 747 aaKnown RBP10.82□□□□□ -0.68
SHMT2-215ENST00000554656 DMTF1Q9Y222 760 aa10.82□□□□□ -0.68
SHMT2-215ENST00000554656 SHROOM3Q8TF72 1996 aa10.82□□□□□ -0.68
SHMT2-215ENST00000554656 GCN1Q92616 2671 aaKnown RBP10.81□□□□□ -0.68
SHMT2-215ENST00000554656 IGLV3-10A0A075B6K4 115 aa10.81□□□□□ -0.68
SHMT2-215ENST00000554656 A0A087WV48 116 aa10.81□□□□□ -0.68
SHMT2-215ENST00000554656 A0A0D9SEW6 157 aa10.81□□□□□ -0.68
SHMT2-215ENST00000554656 USP27XA6NNY8 438 aa10.81□□□□□ -0.68
SHMT2-215ENST00000554656 C1QTNF3-AMACRE9PGA6 284 aa10.81□□□□□ -0.68
SHMT2-215ENST00000554656 TRIM38O00635 465 aa10.81□□□□□ -0.68
SHMT2-215ENST00000554656 PJA2O43164 708 aa10.81□□□□□ -0.68
SHMT2-215ENST00000554656 TLX3O43711 291 aaPredicted RBP10.81□□□□□ -0.68
SHMT2-215ENST00000554656 RNGTTO60942 597 aaKnown RBP10.81□□□□□ -0.68
SHMT2-215ENST00000554656 SDC3O75056 442 aa10.81□□□□□ -0.68
SHMT2-215ENST00000554656 ZNF821O75541 412 aaPredicted RBP10.81□□□□□ -0.68
SHMT2-215ENST00000554656 RHOCP08134 193 aa10.81□□□□□ -0.68
SHMT2-215ENST00000554656 FLT3P36888 993 aa10.81□□□□□ -0.68
SHMT2-215ENST00000554656 GABRB2P47870 512 aa10.81□□□□□ -0.68
SHMT2-215ENST00000554656 ARRB1P49407 418 aaPredicted RBP10.81□□□□□ -0.68
SHMT2-215ENST00000554656 SULT1E1P49888 294 aa10.81□□□□□ -0.68
SHMT2-215ENST00000554656 VAV2P52735 878 aa10.81□□□□□ -0.68
SHMT2-215ENST00000554656 RNASE9P60153 205 aaKnown RBP10.81□□□□□ -0.68
SHMT2-215ENST00000554656 SLC18A3Q16572 532 aa10.81□□□□□ -0.68
SHMT2-215ENST00000554656 ZNF284Q2VY69 593 aa10.81□□□□□ -0.68
SHMT2-215ENST00000554656 PROX2Q3B8N5 592 aa10.81□□□□□ -0.68
SHMT2-215ENST00000554656 RAB6CQ53S08 254 aa10.81□□□□□ -0.68
SHMT2-215ENST00000554656 BRMS1LQ5PSV4 323 aa10.81□□□□□ -0.68
SHMT2-215ENST00000554656 FAM46CQ5VWP2 391 aa10.81□□□□□ -0.68
SHMT2-215ENST00000554656 BNIPLQ7Z465 357 aa10.81□□□□□ -0.68
SHMT2-215ENST00000554656 TFAP2DQ7Z6R9 452 aa10.81□□□□□ -0.68
SHMT2-215ENST00000554656 PRPF39Q86UA1 669 aaKnown RBP10.81□□□□□ -0.68
SHMT2-215ENST00000554656 IQCHQ86VS3 1027 aa10.81□□□□□ -0.68
SHMT2-215ENST00000554656 XYLT1Q86Y38 959 aa10.81□□□□□ -0.68
SHMT2-215ENST00000554656 DCAF4L2Q8NA75 395 aa10.81□□□□□ -0.68
SHMT2-215ENST00000554656 OR7D4Q8NG98 312 aa10.81□□□□□ -0.68
SHMT2-215ENST00000554656 LRIG1Q96JA1 1093 aa10.81□□□□□ -0.68
SHMT2-215ENST00000554656 NOX5Q96PH1 765 aa10.81□□□□□ -0.68
SHMT2-215ENST00000554656 TSGA10Q9BZW7 698 aa10.81□□□□□ -0.68
SHMT2-215ENST00000554656 RAB6CQ9H0N0 254 aa10.81□□□□□ -0.68
SHMT2-215ENST00000554656 MUC3BQ9H195 1237 aa10.81□□□□□ -0.68
SHMT2-215ENST00000554656 PREBQ9HCU5 417 aa10.81□□□□□ -0.68
SHMT2-215ENST00000554656 FZD3Q9NPG1 666 aa10.81□□□□□ -0.68
SHMT2-215ENST00000554656 TRMT1Q9NXH9 659 aaKnown RBP10.81□□□□□ -0.68
SHMT2-215ENST00000554656 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP10.81□□□□□ -0.68
SHMT2-215ENST00000554656 MPP6Q9NZW5 540 aa10.81□□□□□ -0.68
SHMT2-215ENST00000554656 ZFR2Q9UPR6 939 aaKnown RBP10.81□□□□□ -0.68
SHMT2-215ENST00000554656 A0A1W2PQU0 124 aa10.8□□□□□ -0.68
SHMT2-215ENST00000554656 DRGXA6NNA5 263 aa10.8□□□□□ -0.68
SHMT2-215ENST00000554656 E9PAM4 449 aa10.8□□□□□ -0.68
SHMT2-215ENST00000554656 PRAMEF26H0Y7S4 382 aa10.8□□□□□ -0.68
SHMT2-215ENST00000554656 SLC31A1O15431 190 aa10.8□□□□□ -0.68
SHMT2-215ENST00000554656 KRT86O43790 486 aa10.8□□□□□ -0.68
SHMT2-215ENST00000554656 ZMPSTE24O75844 475 aa10.8□□□□□ -0.68
SHMT2-215ENST00000554656 C1SP09871 688 aa10.8□□□□□ -0.68
SHMT2-215ENST00000554656 GIMD1P0DJR0 217 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms